Jatropha Genome Database

JcCB0087221.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0087221.20 - phase: 0 /partial
         (272 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g009020.1 Hexokinase chr05_pseudomolecule_IMGAG_V3 18...   382   e-107
IMGA|Medtr4g159960.1 Hexokinase chr04_pseudomolecule_IMGAG_V3 40...   246   8e-66
IMGA|Medtr8g016060.1 Hexokinase chr08_pseudomolecule_IMGAG_V3 30...   238   2e-63
IMGA|Medtr1g031050.1 Hexokinase chr01_pseudomolecule_IMGAG_V3 74...   174   6e-44
IMGA|Medtr8g102340.1 Hexokinase chr08_pseudomolecule_IMGAG_V3 22...   148   4e-36

>IMGA|Medtr5g009020.1 Hexokinase chr05_pseudomolecule_IMGAG_V3
           1864721-1869886 E EGN_Mt090430 20090702
          Length = 496

 Score =  382 bits (982), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 187/257 (72%), Positives = 207/257 (80%)

Query: 1   VNDTVGSLALGHYCDADTVAAVIIGTGTNACYLERADAIIKCQGLLTTSGGMVVNMEWGN 60
           VNDTVG+LA+GHY D DTVAA++IGTGTNACYLER DAIIKCQGLLTTSG MVVNMEWGN
Sbjct: 226 VNDTVGTLAVGHYHDPDTVAAIVIGTGTNACYLERIDAIIKCQGLLTTSGRMVVNMEWGN 285

Query: 61  FWSSHLPRTSYDIDLDVESLNPNDQGFEKMISGMYLGDIVRRVILRMSQETDIFGPVSSR 120
           FWSSHLPRT YDI+LD ES NPNDQGFEKMISGMYLGDIVRRVILRMS E+D+F P+SS+
Sbjct: 286 FWSSHLPRTQYDIELDAESPNPNDQGFEKMISGMYLGDIVRRVILRMSLESDMFEPISSK 345

Query: 121 LTTPFILETYLVVDMHEDDSPDLQEVARILKEILEITEIPLKARKLVVRICDVVTXXXXX 180
           L TPFIL T L+  MHEDDSPDL EVARIL +  EI ++PLKARK+VV++CDVVT     
Sbjct: 346 LLTPFILRTPLMAAMHEDDSPDLIEVARILNDTFEIPDLPLKARKIVVKVCDVVTRRAAR 405

Query: 181 XXXXGIVGILKKXXXXXXXXXXXXXXXXXXKMKRTVVAIEGDLYTTYTMFREYLHEALNE 240
               GIVGILKK                  KMKRTVVAIEG LY++YT+FREYLHEALNE
Sbjct: 406 LAAAGIVGILKKIGRDGSGGITGGRSRSDIKMKRTVVAIEGGLYSSYTLFREYLHEALNE 465

Query: 241 ILGEDVAPHVILKATED 257
           ILGED+A HVIL  TED
Sbjct: 466 ILGEDIAKHVILNVTED 482


>IMGA|Medtr4g159960.1 Hexokinase chr04_pseudomolecule_IMGAG_V3
           40445427-40441153 E EGN_Mt090430 20090702
          Length = 498

 Score =  246 bits (628), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 125/258 (48%), Positives = 169/258 (65%), Gaps = 10/258 (3%)

Query: 1   VNDTVGSLALGHYCDADTVAAVIIGTGTNACYLERADAIIKCQGLLTTSGGMVVNMEWGN 60
           VNDT+G+LA G + + D +AAVI+GTGTNA Y+E A AI K  GL+  SG MV+NMEWGN
Sbjct: 228 VNDTIGTLAGGRFYNQDVIAAVILGTGTNAAYVEHAHAIPKWHGLMPKSGDMVINMEWGN 287

Query: 61  FWSSHLPRTSYDIDLDVESLNPNDQGFEKMISGMYLGDIVRRVILRMSQETDIFG-PVSS 119
           F SSHLP T YD DLD ESLNP +Q FEK++SGMYLG+IVRR +L+M++E + FG  V  
Sbjct: 288 FRSSHLPLTEYDQDLDAESLNPGEQIFEKLLSGMYLGEIVRRALLKMAEEAEFFGDTVPP 347

Query: 120 RLTTPFILETYLVVDMHEDDSPDLQEVARILKEILEITEIPLKARKLVVRICDVVTXXXX 179
           +L  PFIL T  +  MH D +PDL+EV   L++ILEI+   LK RK+VV +CD+V     
Sbjct: 348 KLKIPFILRTPDMSSMHHDTTPDLKEVGSKLRDILEISNTSLKMRKIVVELCDIVASRGA 407

Query: 180 XXXXXGIVGILKKXXXXXXXXXXXXXXXXXXKMKRTVVAIEGDLYTTYTMFREYLHEALN 239
                GI+GILKK                  + +++V+A++G L+  YT FR  L + L 
Sbjct: 408 RLAAAGILGILKK---------LGRDTVKGGEKQKSVIALDGGLFEHYTKFRVCLEDTLK 458

Query: 240 EILGEDVAPHVILKATED 257
           E+LG++ A  V+++   D
Sbjct: 459 ELLGDEAAETVVVEHAND 476


>IMGA|Medtr8g016060.1 Hexokinase chr08_pseudomolecule_IMGAG_V3
           3005458-3001216 E EGN_Mt090430 20090702
          Length = 494

 Score =  238 bits (608), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 129/258 (50%), Positives = 165/258 (63%), Gaps = 10/258 (3%)

Query: 1   VNDTVGSLALGHYCDADTVAAVIIGTGTNACYLERADAIIKCQGLLTTSGGMVVNMEWGN 60
           VNDTVG+LA G + + D +AAVI+GTGTNA Y+E A AI K  G L  SG MV+NMEWGN
Sbjct: 227 VNDTVGTLAGGRHTNKDVIAAVILGTGTNAAYVESAQAIPKWHGDLPKSGEMVINMEWGN 286

Query: 61  FWSSHLPRTSYDIDLDVESLNPNDQGFEKMISGMYLGDIVRRVILRMSQETDIFGP-VSS 119
           F SSHLP T YD  LD ESLNP +Q FEK+ISGMYLG+IVRRV+ +M++E   FG  V S
Sbjct: 287 FRSSHLPLTEYDYSLDAESLNPGEQTFEKIISGMYLGEIVRRVLYKMAEEAWFFGETVPS 346

Query: 120 RLTTPFILETYLVVDMHEDDSPDLQEVARILKEILEITEIPLKARKLVVRICDVVTXXXX 179
           +L  PFIL T  +  MH D S DL  V   LKEILEI++  L+ RK+VV +C++V     
Sbjct: 347 KLKVPFILRTPDMSAMHHDSSADLNVVKTKLKEILEISDTSLEVRKVVVALCNIVATRGA 406

Query: 180 XXXXXGIVGILKKXXXXXXXXXXXXXXXXXXKMKRTVVAIEGDLYTTYTMFREYLHEALN 239
                GIVGILKK                  + ++ V+A++G LY  YT +R+ L   L 
Sbjct: 407 RLSAAGIVGILKK---------LGKDTITNGEGQKNVIAMDGGLYEHYTEYRKCLENTLK 457

Query: 240 EILGEDVAPHVILKATED 257
           E+LGE V+  VI++ + D
Sbjct: 458 ELLGEGVSDSVIVEHSND 475


>IMGA|Medtr1g031050.1 Hexokinase chr01_pseudomolecule_IMGAG_V3
           7450410-7453329 E EGN_Mt090430 20090702
          Length = 476

 Score =  174 bits (440), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 104/258 (40%), Positives = 148/258 (57%), Gaps = 28/258 (10%)

Query: 1   VNDTVGSLALGHYCDADTVAAVIIGTGTNACYLERADAIIKCQGLLTTSGGMVVNMEWGN 60
           VNDTVG+LA   Y D D   AVI+GTGTNACY+E+  AI K QG +++SG M+++ EWG 
Sbjct: 230 VNDTVGTLAGAEYYDNDAKVAVILGTGTNACYIEKLSAIPKLQGHVSSSGKMIISTEWGA 289

Query: 61  FWSSHLPRTSYDIDLDVESLNPNDQGFEKMISGMYLGDIVRRVILRMSQETDIFG-PVSS 119
           F S+ LP T +D ++D  S+NP    FEK ISGMYLG+IVRRV++ M++E  +FG  V  
Sbjct: 290 F-SNGLPLTVFDREMDAASINPGHHIFEKTISGMYLGEIVRRVLVNMAEEEGLFGISVPQ 348

Query: 120 RLTTPFILETYLVVDMHEDDSPDLQEVARILKEILEITEIPLKARKLVVRICDVVTXXXX 179
           +L+ PFIL T  +  M +D+S DLQ V  +L +   + E  L  RK V+ +CD +     
Sbjct: 349 KLSMPFILGTPDLSAMQQDNSGDLQAVGSLLYDKAGL-ESNLSERKTVLEVCDTIVKRGG 407

Query: 180 XXXXXGIVGILKKXXXXXXXXXXXXXXXXXXKMKRTVVAIEGDLYTTYTMFREYLHEALN 239
                GIVGIL+K                    KR+VVAI+G                  
Sbjct: 408 SLAGAGIVGILQKMEEDSKGLIFG---------KRSVVAIDGGF---------------- 442

Query: 240 EILGEDVAPHVILKATED 257
           E+LG + + +V+++ ++D
Sbjct: 443 ELLGTEKSNNVVIEHSKD 460


>IMGA|Medtr8g102340.1 Hexokinase chr08_pseudomolecule_IMGAG_V3
           22440454-22437695 H EGN_Mt090430 20090702
          Length = 406

 Score =  148 bits (373), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 91/257 (35%), Positives = 132/257 (51%), Gaps = 52/257 (20%)

Query: 1   VNDTVGSLALGHYCDADTVAAVIIGTGTNACYLERADAIIKCQGLLTTSGGMVVNMEWGN 60
           V+DT+G LA G Y + D VAA+ +G  TNA Y+E A      +     S  +V++MEWGN
Sbjct: 137 VDDTIGGLAGGRYYNRDNVAAITLGMSTNAAYVEPAQESELARS--PNSNELVISMEWGN 194

Query: 61  FWSSHLPRTSYDIDLDVESLNPNDQGFEKMISGMYLGDIVRRVILRMSQETDIF-GPVSS 119
           F SSH+P TS+D  LD ES N     FEK+ISGMYLG+IVR V+L+M+QET +F G V  
Sbjct: 195 FNSSHVPLTSFDTILDAESSNSGSGIFEKLISGMYLGEIVRHVLLKMAQETALFGGSVPP 254

Query: 120 RLTTPFILETYLVVDMHEDDSPDLQEVARILKEILEITEIPLKARKLVVRICDVVTXXXX 179
           +L TP+ L +  +  MH+D S D + V+  L E+       +  RK              
Sbjct: 255 KLMTPYSLRSPDMAAMHQDKSEDREVVSEKLNEVFASGWNCINNRK-------------- 300

Query: 180 XXXXXGIVGILKKXXXXXXXXXXXXXXXXXXKMKRTVVAIEGDLYTTYTMFREYLHEALN 239
                                              ++V +E +LY  Y +FR YLH ++ 
Sbjct: 301 -----------------------------------SMVTVEIELYEHYRIFRNYLHSSVW 325

Query: 240 EILGEDVAPHVILKATE 256
           E+LG D++ +VI++ + 
Sbjct: 326 EMLGNDLSDNVIIEHSH 342