Jatropha Genome Database

JcCB0083891.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0083891.10 - phase: 0 
         (288 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g136890.1 GHMP kinase; chr08_pseudomolecule_IMGAG_V3 ...   488   e-138
IMGA|Medtr8g136890.2 hypothetical protein chr08_pseudomolecule_I...   185   2e-47
IMGA|Medtr4g160950.1 Mevalonate and galactokinase; chr04_pseudom...    49   3e-06

>IMGA|Medtr8g136890.1 GHMP kinase; chr08_pseudomolecule_IMGAG_V3
           32715995-32709541 E EGN_Mt090430 20090702
          Length = 497

 Score =  488 bits (1255), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 237/288 (82%), Positives = 259/288 (89%)

Query: 1   MDQAISVMAQAGFAELIDFNPIRATDVKLPAGGTFVIAHSLAESQKAVTAATNYNNRVVE 60
           MDQAISVMA+ GFAELIDFNPIR TDV+LPAGGTFVIA+SLAESQKAVTAATNYNNRVVE
Sbjct: 210 MDQAISVMAKNGFAELIDFNPIRVTDVQLPAGGTFVIANSLAESQKAVTAATNYNNRVVE 269

Query: 61  CRLAAIVLGIKLGMKPQDAISKVKTLSDVEGLCVSFAGRHNSSDPVVAVKELLKEEPYTA 120
           CRLAAIVL IKLGM P +AISKVKTLSDVEGLCVSFAG  NSSDPV+AVKE LKEEPYTA
Sbjct: 270 CRLAAIVLAIKLGMAPTEAISKVKTLSDVEGLCVSFAGTRNSSDPVLAVKEYLKEEPYTA 329

Query: 121 EEIEKITEQDLPXXXXXXXXXLDVLKAATHFKLHQRAAHVYSEAKRVHAFKDTVSSNLSE 180
           EEIE++T + L          L+V+KAA  +KLHQRAAHVYSEAKRV+AFKD VSSNLS+
Sbjct: 330 EEIEEVTREKLTTFLNINASYLEVIKAAKQYKLHQRAAHVYSEAKRVYAFKDVVSSNLSD 389

Query: 181 EDKLKKLGDLMNESHYSCSVLYECSCPELEELVKICREHGALGARLTGAGWGGCAVALVK 240
           E+ LKKLGDLMNESHYSCS LYECSCPELEEL KI R++GA GARLTGAGWGGCAVALVK
Sbjct: 390 EETLKKLGDLMNESHYSCSNLYECSCPELEELTKISRDNGAFGARLTGAGWGGCAVALVK 449

Query: 241 EAIVPQFILNLKENFFQSRIDKGIIGKNDLGLYVFASKPSSGAAIFKF 288
           E+IVPQFILNLKE+++QSRIDKG+I KNDLGLYVFASKPSSG+AIFKF
Sbjct: 450 ESIVPQFILNLKEHYYQSRIDKGVIKKNDLGLYVFASKPSSGSAIFKF 497


>IMGA|Medtr8g136890.2 hypothetical protein
           chr08_pseudomolecule_IMGAG_V3 32715995-32709541 E
           EGN_Mt090430 20090702
          Length = 98

 Score =  185 bits (469), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 85/98 (86%), Positives = 93/98 (94%)

Query: 191 MNESHYSCSVLYECSCPELEELVKICREHGALGARLTGAGWGGCAVALVKEAIVPQFILN 250
           MNESHYSCS LYECSCPELEEL KI R++GA GARLTGAGWGGCAVALVKE+IVPQFILN
Sbjct: 1   MNESHYSCSNLYECSCPELEELTKISRDNGAFGARLTGAGWGGCAVALVKESIVPQFILN 60

Query: 251 LKENFFQSRIDKGIIGKNDLGLYVFASKPSSGAAIFKF 288
           LKE+++QSRIDKG+I KNDLGLYVFASKPSSG+AIFKF
Sbjct: 61  LKEHYYQSRIDKGVIKKNDLGLYVFASKPSSGSAIFKF 98


>IMGA|Medtr4g160950.1 Mevalonate and galactokinase;
           chr04_pseudomolecule_IMGAG_V3 40948008-40939554 E
           EGN_Mt090430 20090702
          Length = 437

 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 6/108 (5%)

Query: 153 LHQRAAHVYSEAKRVHAFKDTVSSNLSEEDKLKKLGDLMNESHYSCSVLYECSCPELEEL 212
           L +RA H +SE  RV    +       E   L+  G L+  S  S    YEC    L +L
Sbjct: 310 LAKRAEHYFSENMRVMKGVEAW-----ETGSLEDFGILIAASGRSSIQNYECGSEPLIQL 364

Query: 213 VKIC-REHGALGARLTGAGWGGCAVALVKEAIVPQFILNLKENFFQSR 259
            +I  R  G LGAR +GAG+ GC +ALV+E +  +    ++  + +++
Sbjct: 365 YEILLRAPGVLGARFSGAGFRGCCIALVEEHLATEAASFVRREYLKAQ 412