Jatropha Genome Database

JcCB0080951.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0080951.20 + phase: 0 /partial
         (513 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr6g080620.1 Serine/threonine protein phosphatase 7 long...    75   1e-13
IMGA|Medtr3g026520.1 Glycoside hydrolase, family 1 chr03_pseudom...    52   6e-07
IMGA|Medtr5g022780.1 hypothetical protein chr05_pseudomolecule_I...    52   6e-07
IMGA|Medtr7g094200.1 hypothetical protein chr07_pseudomolecule_I...    51   1e-06
IMGA|Medtr5g094720.1 Polynucleotidyl transferase, Ribonuclease H...    51   1e-06

>IMGA|Medtr6g080620.1 Serine/threonine protein phosphatase 7 long
           form homolog, related chr06_pseudomolecule_IMGAG_V3
           16204778-16202363 E EGN_Mt090430 20090702
          Length = 578

 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 109/272 (40%), Gaps = 47/272 (17%)

Query: 36  IIGPSHLDFLRNLE------LGRQNY-KSLLGALAERWWDTTNTFHFSWGEMTMTPTDFS 88
           I  P   D+LR  E      +GR    + ++ AL ERW   T+TFHF  GE T+T  D  
Sbjct: 36  IPSPYIEDYLRQAEFFEVSQIGRYKIDRHIVTALVERWRSETHTFHFRTGECTITLEDVY 95

Query: 89  LISGIPFG----TRPIELYDDWRTAVTPDRMTELIGIDLPRIVRPSYSTPDLSVSRHWLS 144
           ++ G+PFG    T P  L   W          +L+G     I  P++ T   ++S  WL 
Sbjct: 96  ILLGLPFGGPVVTAPPNL--PWNNCA------QLLG-----ITHPAHKTDGFTLSLSWLK 142

Query: 145 LQAPDIYARHRQGELTATQVARFTLLLLFASSFWSNRKEKF-NPSILKSLEDLAHLTKYD 203
               D     +       Q  R  LL LF    + N    F + S L  L D      Y 
Sbjct: 143 DNLIDNNFSEQSPPEVKIQHTRRYLLYLFEGFLFPNTTGLFVHNSWLYLLMDFNETRNYS 202

Query: 204 WAGAILSRMYDDMCDLSRGHCK-LSGTYYFWETWAFEYFPYIRPELSRTDLGLGLVPLAW 262
           W  A+L+ +Y  +C+ S  + K L G ++  + W +    YI P   + D  L   PL  
Sbjct: 203 WGSAVLTYLYRGLCEASHPNIKALFGCHFLLQVWGYCRLSYIAP---KNDNPLQW-PLGL 258

Query: 263 RW-----------------YRANHQSVLRHKF 277
           +W                 YR     +L H+F
Sbjct: 259 KWTGAGSRYYENPSHDTISYRKKFDDILEHQF 290


>IMGA|Medtr3g026520.1 Glycoside hydrolase, family 1
           chr03_pseudomolecule_IMGAG_V3 7157869-7154911 H
           EGN_Mt090430 20090702
          Length = 452

 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 9/134 (6%)

Query: 115 MTELIGIDLPRIVRPSYSTPDLSVSR-HWLSLQAPDIYARHRQGELTATQVARFTLLLLF 173
           ++EL+G+ +    R  +   + S  R  WL     D+Y   R GE    + AR  L  L 
Sbjct: 133 LSELLGVSIS-FARTEFRVTNASHVRFSWLL----DLY-NQRCGEKRWVEAARAFLFCLV 186

Query: 174 ASSFWSNRKEK-FNPSILKSLEDLAHLTKYDWAGAILSRMYDDMCDLSRGHCKLSGTYY- 231
             + ++++     + + L+   DL     Y W  A L+ +YD++C  S  H K   +Y  
Sbjct: 187 GCTLFTDKSANGVDVAYLECFRDLDSCGGYAWGTAALAYLYDNLCHASLHHIKTISSYLT 246

Query: 232 FWETWAFEYFPYIR 245
             + W +E+FP +R
Sbjct: 247 LMQAWVYEHFPSLR 260


>IMGA|Medtr5g022780.1 hypothetical protein
           chr05_pseudomolecule_IMGAG_V3 8902349-8901212 E
           EGN_Mt090430 20090702
          Length = 272

 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/221 (23%), Positives = 89/221 (40%), Gaps = 15/221 (6%)

Query: 58  LLGALAERWWDTTNTFHFSWGEMTMTPTDFSLISGIPFGTRPIELYDDWRTAVTPDRMTE 117
           ++ A+ ERW   T++FH   G+MT+T  D   +  IP   R ++  +        D MT 
Sbjct: 1   MIRAMCERWHTETSSFHLLVGDMTITLDDVHHLLHIPIHGRMLDHDEAMGQERAIDLMTR 60

Query: 118 LIGID---------LPRIVRPSYSTPDLSVSRHWLS---LQAPDIYARHRQGELTATQVA 165
           L+G+              V  +Y T       H      L+ P      ++         
Sbjct: 61  LLGMSDADARAETMTESAVHINYPTLKRVYEGHLTEARRLEDPQTREELQERARRRQWCV 120

Query: 166 RFTLLLLFASSFWSNRKEKFNPSI-LKSLEDLAHLTKYDWAGAILSRMYDDMCD-LSRGH 223
           R  LL L   + ++N+  +    I L  + DL  + K+ W G  L+ +YD + D +   +
Sbjct: 121 RSFLLYLVGCALFTNKTNRHIDLIYLDCMADLQAIGKWSWGGMALAYLYDYLDDSVILNN 180

Query: 224 CKLSGTYYFWETWAFEYFPYIRPELSRTDLGLGLVPLAWRW 264
             ++G+   +  W  E+ P + P   + +      P A RW
Sbjct: 181 RTMAGSTTLFMGWILEHLPGLYPR-KKNNEWTSERPCAGRW 220


>IMGA|Medtr7g094200.1 hypothetical protein
           chr07_pseudomolecule_IMGAG_V3 21294812-21292307 E
           EGN_Mt090430 20090702
          Length = 563

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 8/140 (5%)

Query: 149 DIYARHRQGELTATQVARFTLLLLFASSFWSNRKEKF-NPSILKSLEDLAHLTKYDWAGA 207
           D++ RH + ++     +R  +LLL   + +SN+     +   L   EDL++  +Y W  A
Sbjct: 251 DLFVRHCKTDMFEY-ASRAYMLLLVGCTIFSNKSITLVDAKYLSLFEDLSNCGRYCWGAA 309

Query: 208 ILSRMYDDMCDLSRGHCKLSGTY-YFWETWAFEYFPY----IRPELSRTDLGLGLV-PLA 261
            L  +Y+ + + S   CK  G Y    + W +EYFP     +   ++  + G+G+   + 
Sbjct: 310 SLVTLYEHLGNGSMMSCKQLGGYATLLQCWIYEYFPTLGNRVENRVACDEPGMGVARAMR 369

Query: 262 WRWYRANHQSVLRHKFLGDL 281
           W++ R N +     + + DL
Sbjct: 370 WKYPRGNLKVDQIRRMIDDL 389


>IMGA|Medtr5g094720.1 Polynucleotidyl transferase, Ribonuclease H
           fold chr05_pseudomolecule_IMGAG_V3 37505006-37502180 E
           EGN_Mt090430 20090702
          Length = 605

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 72/175 (41%), Gaps = 13/175 (7%)

Query: 57  SLLGALAERWWDTTNTFHFSWGEMTMTPTDFSLISGIPFGTRPIELYDDWRTAVTPDRMT 116
           +++ A+ ERW   T++FH   GEMT+T  D   +  IP   R +   +        D MT
Sbjct: 53  AMIRAMCERWHTETSSFHLPVGEMTVTLDDVHNLLHIPIHGRMLNHDEAMGQERAIDLMT 112

Query: 117 ELIGI---DLPRIVRP------SYSTPDLSVSRHWLS---LQAPDIYARHRQGELTATQV 164
            L  +   D    +R       SY T       H +    L+ P      R+  +     
Sbjct: 113 RLFSMSDADARAEIRSESVGHISYPTLKRVYEHHLIEARRLEEPRTREDLRERGMRRVWC 172

Query: 165 ARFTLLLLFASSFWSNRKEKFNPSI-LKSLEDLAHLTKYDWAGAILSRMYDDMCD 218
            R  LL L   + ++N+  +    I L  + DL  + K+ W G  L+ MYD + D
Sbjct: 173 VRSFLLYLVGCALFTNKTNRHIDLIYLDCMADLQAIGKWSWGGMTLAYMYDYLDD 227