Jatropha Genome Database

JcCB0079621.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0079621.20 - phase: 0 /pseudo/partial
         (207 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|CU179634_11.1 Auxin Efflux Carrier CU179634.6 45127-49222 H...   202   1e-52
IMGA|Medtr5g024900.1 Auxin Efflux Carrier chr05_pseudomolecule_I...   183   6e-47
IMGA|Medtr5g024900.2 Auxin Efflux Carrier chr05_pseudomolecule_I...   182   9e-47
IMGA|Medtr8g087050.1 Auxin Efflux Carrier chr08_pseudomolecule_I...   178   1e-45
IMGA|Medtr5g024590.1 Auxin Efflux Carrier chr05_pseudomolecule_I...   135   1e-32
IMGA|Medtr5g024600.1 Auxin Efflux Carrier chr05_pseudomolecule_I...   134   2e-32
IMGA|Medtr5g024490.1 Auxin Efflux Carrier chr05_pseudomolecule_I...   132   1e-31
IMGA|Medtr5g024890.1 Auxin Efflux Carrier chr05_pseudomolecule_I...   132   1e-31
IMGA|Medtr5g024510.1 Auxin Efflux Carrier chr05_pseudomolecule_I...   132   1e-31
IMGA|Medtr8g087670.1 Auxin Efflux Carrier chr08_pseudomolecule_I...   129   1e-30
IMGA|Medtr1g137540.1 Auxin Efflux Carrier chr01_pseudomolecule_I...    80   7e-16
IMGA|Medtr5g068420.1 Auxin Efflux Carrier chr05_pseudomolecule_I...    80   1e-15
IMGA|Medtr7g080730.1 Auxin Efflux Carrier chr07_pseudomolecule_I...    77   6e-15

>IMGA|CU179634_11.1 Auxin Efflux Carrier CU179634.6 45127-49222 H
           EGN_Mt090430 20090702
          Length = 407

 Score =  202 bits (513), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 101/154 (65%), Positives = 117/154 (75%)

Query: 54  IVGFVIGLVPYIRKLLIGVEAPLHVIRDTTSLLGEAAIPXXXXXXXXXXXXXXXXXXXXK 113
           I GF++GLVP +RKL+IG  APL VI ++  LLG+ AIP                    K
Sbjct: 254 IAGFIVGLVPQMRKLMIGDVAPLRVIENSAILLGDGAIPLLTLIMGGNLLKGLTGSGIQK 313

Query: 114 SVLFGIIVARYIALPLIGIVIVKGALRFGFIPSDPLYQFVLLLQFAVPPAMNIGVITQLF 173
           S+L GIIV RYIALPLIGIV+VKGA+R G +  DPLYQFVLLLQFA+PPAMNIG ITQLF
Sbjct: 314 SLLLGIIVVRYIALPLIGIVVVKGAIRLGLVQHDPLYQFVLLLQFALPPAMNIGTITQLF 373

Query: 174 GAGETECSVIMFWAYALASVSLTLWSTIFMWLVA 207
           GAGE+ECSVIMFWAYALAS+SLTLW+T FMWLV+
Sbjct: 374 GAGESECSVIMFWAYALASISLTLWTTFFMWLVS 407


>IMGA|Medtr5g024900.1 Auxin Efflux Carrier
           chr05_pseudomolecule_IMGAG_V3 9956007-9959633 E
           EGN_Mt090430 20090702
          Length = 417

 Score =  183 bits (464), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 88/154 (57%), Positives = 112/154 (72%)

Query: 54  IVGFVIGLVPYIRKLLIGVEAPLHVIRDTTSLLGEAAIPXXXXXXXXXXXXXXXXXXXXK 113
           IVGF++G+VP++R+L+IG  APLHVI D+ S+LG+AAIP                     
Sbjct: 264 IVGFIVGVVPWLRRLMIGSNAPLHVIEDSASMLGDAAIPTITLIMGANLLRGLKGASTPF 323

Query: 114 SVLFGIIVARYIALPLIGIVIVKGALRFGFIPSDPLYQFVLLLQFAVPPAMNIGVITQLF 173
             + GIIV RYI LP+ G++I+KGA   G +  DPLYQFVLLLQ+A+PPAMNIG I QLF
Sbjct: 324 WTIIGIIVVRYILLPIFGVLIIKGATHLGLVQIDPLYQFVLLLQYALPPAMNIGTIAQLF 383

Query: 174 GAGETECSVIMFWAYALASVSLTLWSTIFMWLVA 207
           GAGE+ECSV+M W YALAS+++TLWST FMWLV+
Sbjct: 384 GAGESECSVMMLWTYALASIAVTLWSTYFMWLVS 417


>IMGA|Medtr5g024900.2 Auxin Efflux Carrier
           chr05_pseudomolecule_IMGAG_V3 9956007-9959633 E
           EGN_Mt090430 20090702
          Length = 353

 Score =  182 bits (462), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 88/154 (57%), Positives = 112/154 (72%)

Query: 54  IVGFVIGLVPYIRKLLIGVEAPLHVIRDTTSLLGEAAIPXXXXXXXXXXXXXXXXXXXXK 113
           IVGF++G+VP++R+L+IG  APLHVI D+ S+LG+AAIP                     
Sbjct: 200 IVGFIVGVVPWLRRLMIGSNAPLHVIEDSASMLGDAAIPTITLIMGANLLRGLKGASTPF 259

Query: 114 SVLFGIIVARYIALPLIGIVIVKGALRFGFIPSDPLYQFVLLLQFAVPPAMNIGVITQLF 173
             + GIIV RYI LP+ G++I+KGA   G +  DPLYQFVLLLQ+A+PPAMNIG I QLF
Sbjct: 260 WTIIGIIVVRYILLPIFGVLIIKGATHLGLVQIDPLYQFVLLLQYALPPAMNIGTIAQLF 319

Query: 174 GAGETECSVIMFWAYALASVSLTLWSTIFMWLVA 207
           GAGE+ECSV+M W YALAS+++TLWST FMWLV+
Sbjct: 320 GAGESECSVMMLWTYALASIAVTLWSTYFMWLVS 353


>IMGA|Medtr8g087050.1 Auxin Efflux Carrier
           chr08_pseudomolecule_IMGAG_V3 18011108-18008418 H
           EGN_Mt090430 20090702
          Length = 404

 Score =  178 bits (452), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 87/154 (56%), Positives = 112/154 (72%), Gaps = 1/154 (0%)

Query: 54  IVGFVIGLVPYIRKLLIGVEAPLHVIRDTTSLLGEAAIPXXXXXXXXXXXXXXXXXXXXK 113
           I+GF IG++  IRKL++G  APLHV+ D+ S+LGEAAIP                     
Sbjct: 250 IIGFCIGVINPIRKLMVGNNAPLHVVEDSASMLGEAAIPTVTLILGANLLKGLKGTSTPV 309

Query: 114 SVLFGIIVARYIALPLIGIVIVKGALRFGFIPSDPLYQFVLLLQFAVPPAMNIGVITQLF 173
             + GII  RYI LP+IG+V+V+GA++FG +  DPLYQFVLLLQ+A+PPAMNIG + QLF
Sbjct: 310 WTIVGIIAVRYIFLPIIGVVVVQGAIKFGLVQPDPLYQFVLLLQYALPPAMNIGTMAQLF 369

Query: 174 GA-GETECSVIMFWAYALASVSLTLWSTIFMWLV 206
           G+ GE+ECSVIM W+YALAS+++TLWST FMWLV
Sbjct: 370 GSGGESECSVIMLWSYALASIAVTLWSTFFMWLV 403


>IMGA|Medtr5g024590.1 Auxin Efflux Carrier
           chr05_pseudomolecule_IMGAG_V3 9763626-9758122 F
           EGN_Mt090430 20090702
          Length = 421

 Score =  135 bits (340), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 66/152 (43%), Positives = 91/152 (59%)

Query: 56  GFVIGLVPYIRKLLIGVEAPLHVIRDTTSLLGEAAIPXXXXXXXXXXXXXXXXXXXXKSV 115
           GF+ G V ++RKL+IG  AP  VI+ T  LLG   IP                       
Sbjct: 269 GFLFGAVAWLRKLIIGDNAPFRVIQSTLELLGNGTIPCITLLLGGNLTAGLKSSSVKPLT 328

Query: 116 LFGIIVARYIALPLIGIVIVKGALRFGFIPSDPLYQFVLLLQFAVPPAMNIGVITQLFGA 175
           L  II+ R   LP+IG+ IVK A  +GF+P DPL+Q+ L++Q+A+PPAMNI  + QLF  
Sbjct: 329 LICIIITRLFLLPVIGLFIVKAAASYGFLPVDPLFQYTLVMQYAMPPAMNISTMAQLFDV 388

Query: 176 GETECSVIMFWAYALASVSLTLWSTIFMWLVA 207
           G  ECSVI+ W Y+ A+++LT WST  +WL++
Sbjct: 389 GNEECSVILLWTYSAAAIALTAWSTFLLWLLS 420


>IMGA|Medtr5g024600.1 Auxin Efflux Carrier
           chr05_pseudomolecule_IMGAG_V3 9771231-9768528 E
           EGN_Mt090430 20090702
          Length = 420

 Score =  134 bits (338), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 65/152 (42%), Positives = 89/152 (58%)

Query: 56  GFVIGLVPYIRKLLIGVEAPLHVIRDTTSLLGEAAIPXXXXXXXXXXXXXXXXXXXXKSV 115
           GF+ G V ++R L+IG  AP  VI+DT  LLG   IP                       
Sbjct: 269 GFLFGAVAWLRNLIIGDNAPFSVIQDTLELLGNGTIPCITLLLGGNLTAGLKSSSVKPLT 328

Query: 116 LFGIIVARYIALPLIGIVIVKGALRFGFIPSDPLYQFVLLLQFAVPPAMNIGVITQLFGA 175
           L  II+ R   LP+IG+ IVK    FG +P DPL+Q+ L++Q+A+PPAMNI  + QLF  
Sbjct: 329 LISIIITRLFVLPVIGLFIVKAVASFGILPVDPLFQYTLVMQYAMPPAMNISTMAQLFDV 388

Query: 176 GETECSVIMFWAYALASVSLTLWSTIFMWLVA 207
           G  ECSVI+ W Y+ A+++LT WST  +WL++
Sbjct: 389 GNEECSVILLWTYSAAAIALTSWSTFLLWLLS 420


>IMGA|Medtr5g024490.1 Auxin Efflux Carrier
           chr05_pseudomolecule_IMGAG_V3 9725026-9727679 E
           EGN_Mt090430 20090702
          Length = 355

 Score =  132 bits (333), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 66/152 (43%), Positives = 88/152 (57%)

Query: 56  GFVIGLVPYIRKLLIGVEAPLHVIRDTTSLLGEAAIPXXXXXXXXXXXXXXXXXXXXKSV 115
           GF+ G V ++R L+IG  AP  VI+DT  LLG   IP                       
Sbjct: 203 GFLFGAVAWLRNLIIGDNAPFSVIQDTLELLGNGTIPCITLLLGGKLTAGLKSSSVKPLT 262

Query: 116 LFGIIVARYIALPLIGIVIVKGALRFGFIPSDPLYQFVLLLQFAVPPAMNIGVITQLFGA 175
           L  II+ R   LP+IG+ IVK A  FG +P DPL+Q+ L++Q+A+PPAMNI  I QLF  
Sbjct: 263 LISIIITRLFVLPVIGLFIVKAAANFGILPVDPLFQYTLVMQYAMPPAMNISTIAQLFDV 322

Query: 176 GETECSVIMFWAYALASVSLTLWSTIFMWLVA 207
           G  ECSVI+   Y+ A+++LT WST   WL++
Sbjct: 323 GNEECSVILLRTYSAAAIALTAWSTFLSWLLS 354


>IMGA|Medtr5g024890.1 Auxin Efflux Carrier
           chr05_pseudomolecule_IMGAG_V3 9953611-9954192 H
           EGN_Mt090430 20090702
          Length = 114

 Score =  132 bits (332), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 62/90 (68%), Positives = 75/90 (83%)

Query: 118 GIIVARYIALPLIGIVIVKGALRFGFIPSDPLYQFVLLLQFAVPPAMNIGVITQLFGAGE 177
           GII  RYI LP+ GI+IVKGA   G +  DPLYQF+LLLQ+A+PPAM+IG I QLFGAGE
Sbjct: 25  GIIAVRYIFLPISGILIVKGATHLGLVQVDPLYQFILLLQYALPPAMSIGTIAQLFGAGE 84

Query: 178 TECSVIMFWAYALASVSLTLWSTIFMWLVA 207
           +ECSV+M W YALAS+++TLWST FMWLV+
Sbjct: 85  SECSVMMLWTYALASIAVTLWSTYFMWLVS 114


>IMGA|Medtr5g024510.1 Auxin Efflux Carrier
           chr05_pseudomolecule_IMGAG_V3 9734075-9732639 E
           EGN_Mt090430 20090702
          Length = 175

 Score =  132 bits (331), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 64/152 (42%), Positives = 91/152 (59%)

Query: 56  GFVIGLVPYIRKLLIGVEAPLHVIRDTTSLLGEAAIPXXXXXXXXXXXXXXXXXXXXKSV 115
           GF+ G V ++R L+IG  AP  VI+ T  LLG   IP                       
Sbjct: 23  GFLFGAVAWLRNLIIGDNAPFRVIQSTLELLGNGTIPCITLLLGGNLTAGLKSSSVKPLT 82

Query: 116 LFGIIVARYIALPLIGIVIVKGALRFGFIPSDPLYQFVLLLQFAVPPAMNIGVITQLFGA 175
           L  II+ R   LP+IG+ IVK A  +GF+P DPL+Q+ L++Q+A+PPAM+I  + Q+F  
Sbjct: 83  LICIIITRLFVLPVIGLFIVKAAANYGFLPVDPLFQYTLVMQYAMPPAMSISTMAQVFDV 142

Query: 176 GETECSVIMFWAYALASVSLTLWSTIFMWLVA 207
           G  ECSVI+ WAY+ A+++LT WST  +WL++
Sbjct: 143 GNEECSVILLWAYSAAAIALTAWSTFLLWLLS 174


>IMGA|Medtr8g087670.1 Auxin Efflux Carrier
           chr08_pseudomolecule_IMGAG_V3 18278553-18280159 H
           EGN_Mt090430 20090702
          Length = 284

 Score =  129 bits (323), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 65/150 (43%), Positives = 91/150 (60%), Gaps = 6/150 (4%)

Query: 55  VGFVIGLVPYIRKLLIGVEAPLHVIRDTTSLLGEAAIPXXXXXXXXXXXXXXXXXXXXKS 114
           +GF+ G V  +R L+IG +APL VI+D+  LLG+  IP                      
Sbjct: 138 LGFLFGGVKTLRNLIIGQDAPLKVIQDSIQLLGDGTIPCITLLLGMRSSSIKPL------ 191

Query: 115 VLFGIIVARYIALPLIGIVIVKGALRFGFIPSDPLYQFVLLLQFAVPPAMNIGVITQLFG 174
           VL  II+ +   LP+IG  +VK A   GF+P DPL+Q+VL++Q+ +PPAMNI  +TQLF 
Sbjct: 192 VLISIIIVKLFLLPVIGFFVVKAAANLGFLPLDPLFQYVLIIQYVLPPAMNISTMTQLFD 251

Query: 175 AGETECSVIMFWAYALASVSLTLWSTIFMW 204
            G  E SVI+ W+Y  A+++LTLWST  +W
Sbjct: 252 VGTEEFSVILLWSYGAAAIALTLWSTFLLW 281


>IMGA|Medtr1g137540.1 Auxin Efflux Carrier
           chr01_pseudomolecule_IMGAG_V3 30506293-30504911 E
           EGN_Mt090430 20090702
          Length = 460

 Score = 80.1 bits (196), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 1/151 (0%)

Query: 53  QIVGFVIGLVPYIRKLLIGVEAPLHVIRDTTSLLGEAAIPXXXXXXXXXXXXXXXXXXXX 112
            ++  +IG VP ++    G +AP+  + D+  +L  A +P                    
Sbjct: 303 SLLAIIIGTVPQLKTFFFGNDAPMSFMTDSLEILAGAMVPCVMLILGGMLAEGPNESTLG 362

Query: 113 KSVLFGIIVARYIALPLIGIVIVKGALRFGF-IPSDPLYQFVLLLQFAVPPAMNIGVITQ 171
                GIIVAR + LP+IGI +V  A +  F + +D +++FVLLLQ+  P A+ +G I  
Sbjct: 363 IKTTIGIIVARLVVLPVIGIGVVVLADKLNFLVENDAMFRFVLLLQYTTPSAILLGAIAS 422

Query: 172 LFGAGETECSVIMFWAYALASVSLTLWSTIF 202
           L G   +E S ++FW +  A  SL+L+  I+
Sbjct: 423 LRGYAVSEASAVLFWQHVFALFSLSLYIIIY 453


>IMGA|Medtr5g068420.1 Auxin Efflux Carrier
           chr05_pseudomolecule_IMGAG_V3 24468877-24470728 E
           EGN_Mt090430 20090702
          Length = 453

 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 1/155 (0%)

Query: 53  QIVGFVIGLVPYIRKLLIGVEAPLHVIRDTTSLLGEAAIPXXXXXXXXXXXXXXXXXXXX 112
            ++  +IG VP ++ L  G +AP   I D+  +LG A +P                    
Sbjct: 296 SLLAIIIGTVPQLKALFFGYDAPFSFITDSLEILGGAMVPSVMLILGGMLAEGPNESRLG 355

Query: 113 KSVLFGIIVARYIALPLIGIVIVKGALRFGF-IPSDPLYQFVLLLQFAVPPAMNIGVITQ 171
                GI+VAR + LP++GI IV  + +  F + +D +++FVLLLQ+  P A+ +G I  
Sbjct: 356 LRTTIGIVVARLLVLPVLGIGIVALSNKLNFLVENDAMFRFVLLLQYTSPSAILLGAIAS 415

Query: 172 LFGAGETECSVIMFWAYALASVSLTLWSTIFMWLV 206
           L G   +E S ++FW +  A  SL+ +  I+  ++
Sbjct: 416 LRGYAVSEASALLFWQHVFALFSLSFYIVIYFRII 450


>IMGA|Medtr7g080730.1 Auxin Efflux Carrier
           chr07_pseudomolecule_IMGAG_V3 17249252-17244889 E
           EGN_Mt090430 20090702
          Length = 418

 Score = 77.0 bits (188), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 2/152 (1%)

Query: 53  QIVGFVIGLVPYIRKLLIGVEAPLHVIRDTTSLLGEAAIPXXXXXXXXXXXXXXXXXXXX 112
            I+   +G VP+++KL+   EAPL    D+  +LGEA IP                    
Sbjct: 264 SILAMTLGAVPFLKKLIFTPEAPLFFFTDSCMILGEAMIPCILLALGGNLIDGPGSSKLG 323

Query: 113 KSVLFGIIVARYIALPLIGIVIVKGALRFGFI-PSDPLYQFVLLLQFAVPPAMNIGVITQ 171
                 I+ AR + +P +G+ IV  A + GF+ P D +++FVLLLQ ++P ++  G +  
Sbjct: 324 FKTTAAIVFARLVLVPPVGLGIVMLADKLGFLPPDDKMFRFVLLLQHSMPTSVLSGAVAN 383

Query: 172 LFGAGETECSVIMFWAYALASVSLTLWSTIFM 203
           L G G  E + ++FW +  A +S+ +W  +++
Sbjct: 384 LRGCGR-EAAAVLFWVHIFAVISMAVWIVLYL 414