Jatropha Genome Database

JcCB0077821.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0077821.10 + phase: 0 
         (362 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC235567_90.1 Ketopantoate hydroxymethyltransferase AC23556...   530   e-151

>IMGA|AC235567_90.1 Ketopantoate hydroxymethyltransferase AC235567.1
           345051-342096 E EGN_Mt090430 20090702
          Length = 351

 Score =  530 bits (1365), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 259/348 (74%), Positives = 290/348 (83%), Gaps = 3/348 (0%)

Query: 1   MALFAKLYRSSSVIKAHYLHHCLRSMSNVPENTVYGGPKSQNPNERVTLTQLKQKHKKGE 60
           MA+   + +++     H     LR+MSN+PENTVY GP  QN  +RVTL+QL QKHK  +
Sbjct: 1   MAILRSILKATKTTLQHS-SSLLRNMSNLPENTVYTGPTPQN--KRVTLSQLHQKHKNSQ 57

Query: 61  PITVVTAYDYPSAVHLDQAGIDICLVGDSAAMVVHGHDTTLPISLEEMLVHCRAVARGAK 120
           PIT+VTAYDYPSAVHLD A IDICLVGDSA+MVVHGHDTTLPI+L+EMLVHCRAVARGAK
Sbjct: 58  PITMVTAYDYPSAVHLDMAAIDICLVGDSASMVVHGHDTTLPITLDEMLVHCRAVARGAK 117

Query: 121 RPLLVGDLPFGTYESSTKQAVDTAVRVLKEGGMDAIKLEGGSPSRITAAKAIVEAGIAVM 180
            PLLVGDLPFGTYE S+ QAVDTAVR+LKEG MDAIKLEGGSPSRI AAKAIVEAGIAV+
Sbjct: 118 TPLLVGDLPFGTYECSSNQAVDTAVRILKEGQMDAIKLEGGSPSRIVAAKAIVEAGIAVI 177

Query: 181 GHVGLTPQAISVLGGFRPQGKNISSAVKVVETSLALQEVGCFSVVLECXXXXXXXXXTSA 240
           GHVGLTPQAISVLGGFRPQG+N++SAVKVVET+LALQE GCF+VVLEC         T+A
Sbjct: 178 GHVGLTPQAISVLGGFRPQGRNVASAVKVVETALALQEAGCFAVVLECVPAPVAAAATAA 237

Query: 241 LRIPTIGIGAGPFCSGQVLVYHDLLGMLQHPHHAKVTPKFCKQYAQVGDVINKALLEYKE 300
           L+IPTIGIGAGP+CSGQVLVYHDLLGMLQHPHHAKVTPKFCKQYA+VGDVINKALLEYKE
Sbjct: 238 LQIPTIGIGAGPYCSGQVLVYHDLLGMLQHPHHAKVTPKFCKQYARVGDVINKALLEYKE 297

Query: 301 EVTNSSFPGPAHSPYKINAADINGLLNELQKLGLNKXXXXXXXXXEKI 348
           +V N SFP   HSPYKI+  D NG LNELQKLG +K         +K+
Sbjct: 298 DVMNGSFPDAQHSPYKISETDANGFLNELQKLGFDKAASAASEAVQKM 345