Jatropha Genome Database

JcCB0076221.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0076221.10 + phase: 0 /partial
         (108 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g099820.1 Protein FLOWERING LOCUS T, putative chr07_p...   184   8e-48
IMGA|Medtr7g006170.1 PEBP chr07_pseudomolecule_IMGAG_V3 881445-8...   182   3e-47
IMGA|Medtr7g099890.1 PEBP chr07_pseudomolecule_IMGAG_V3 22393578...   162   3e-41
IMGA|AC146807_6.1 Phosphatidylethanolamine-binding protein AC146...   159   4e-40
IMGA|Medtr7g127250.1 PEBP chr07_pseudomolecule_IMGAG_V3 29786109...   144   1e-35
IMGA|Medtr7g006200.1 PEBP chr07_pseudomolecule_IMGAG_V3 920474-9...   141   9e-35
IMGA|Medtr2g108000.1 PEBP chr02_pseudomolecule_IMGAG_V3 25518987...   139   3e-34
IMGA|Medtr7g099870.1 PEBP chr07_pseudomolecule_IMGAG_V3 22384098...   118   7e-28
IMGA|Medtr4g155400.1 Phosphatidylethanolamine-binding protein ch...   113   2e-26
IMGA|Medtr7g099850.1 PEBP chr07_pseudomolecule_IMGAG_V3 22382227...    66   5e-12
IMGA|Medtr5g086050.1 PEBP chr05_pseudomolecule_IMGAG_V3 32969840...    55   7e-09
IMGA|AC233673_6.1 PEBP AC233673.1 13786-12948 H EGN_Mt090430 200...    46   5e-06
IMGA|Medtr7g026480.1 PEBP chr07_pseudomolecule_IMGAG_V3 6806133-...    46   6e-06

>IMGA|Medtr7g099820.1 Protein FLOWERING LOCUS T, putative
           chr07_pseudomolecule_IMGAG_V3 22362201-22364275 F
           EGN_Mt090430 20090702
          Length = 176

 Score =  184 bits (468), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 85/106 (80%), Positives = 94/106 (88%)

Query: 1   VMVDPDAPSPSDPNLREYLHWLVTDIPATTGVTFGQEIVCYESPRPSLGIHRFVFILFRQ 60
           VMVDPD+PSPS+P  +EYLHWLVTDIP TT VTFG E+V YE PRP+ GIHRFVF+LFRQ
Sbjct: 68  VMVDPDSPSPSNPTFKEYLHWLVTDIPGTTEVTFGNEVVNYERPRPTSGIHRFVFVLFRQ 127

Query: 61  LGRQTVYPPGWRQNFNTRDFAELYNLGSPVAAVYFNCQRESGTGGR 106
             RQ VY PGWRQNFNTR+FAELYNLGSPVAAV+FNCQRESG+GGR
Sbjct: 128 QCRQRVYAPGWRQNFNTREFAELYNLGSPVAAVFFNCQRESGSGGR 173


>IMGA|Medtr7g006170.1 PEBP chr07_pseudomolecule_IMGAG_V3
           881445-879387 H EGN_Mt090430 20090702
          Length = 173

 Score =  182 bits (463), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 83/107 (77%), Positives = 94/107 (87%)

Query: 1   VMVDPDAPSPSDPNLREYLHWLVTDIPATTGVTFGQEIVCYESPRPSLGIHRFVFILFRQ 60
           VMVDPD PSPS+PN+REYLHW+VT+IPATTG TFGQEIV YE+PRP+ GIHR +F+LFRQ
Sbjct: 64  VMVDPDGPSPSNPNMREYLHWMVTNIPATTGTTFGQEIVSYENPRPTSGIHRVIFVLFRQ 123

Query: 61  LGRQTVYPPGWRQNFNTRDFAELYNLGSPVAAVYFNCQRESGTGGRR 107
             R TV  PGWRQNF TRDFAE YNLG PVAA+YFNCQRE+G+GGRR
Sbjct: 124 PCRHTVLAPGWRQNFITRDFAEFYNLGLPVAALYFNCQRENGSGGRR 170


>IMGA|Medtr7g099890.1 PEBP chr07_pseudomolecule_IMGAG_V3
           22393578-22395716 H EGN_Mt090430 20090702
          Length = 171

 Score =  162 bits (411), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 76/107 (71%), Positives = 88/107 (82%), Gaps = 1/107 (0%)

Query: 1   VMVDPDAPSPSDPNLREYLHWLVTDIPATTGVTFGQEIVCYESPRPSLGIHRFVFILFRQ 60
           VMVD DAPSPS+P L+EYLHW+VTDIPATT  +FG+E+V YESP+PS GIHRFV  LF+Q
Sbjct: 65  VMVDADAPSPSNPFLKEYLHWMVTDIPATTSASFGKEVVFYESPKPSAGIHRFVIALFKQ 124

Query: 61  LGRQTVYPPGWRQNFNTRDFAELYNLGSPVAAVYFNCQRESGTGGRR 107
           LGR TV+ P WR NFNT +FAE+ NL   VA+VYFNCQRE G GGRR
Sbjct: 125 LGRDTVFAPDWRHNFNTTNFAEINNL-VIVASVYFNCQRERGCGGRR 170


>IMGA|AC146807_6.1 Phosphatidylethanolamine-binding protein
           AC146807.56 102779-100897 H EGN_Mt090430 20090702
          Length = 172

 Score =  159 bits (401), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 75/108 (69%), Positives = 87/108 (80%), Gaps = 2/108 (1%)

Query: 1   VMVDPDAPSPSDPNLREYLHWLVTDIPATTGVTFGQEIVCYESPRPSLGIHRFVFILFRQ 60
           +M DPDAPSPSDP+LRE+LHW+VTDIP TT V+FG EIV YE+P+P +GIHR+VFILF+Q
Sbjct: 67  IMTDPDAPSPSDPHLREHLHWMVTDIPGTTDVSFGNEIVEYENPKPVIGIHRYVFILFKQ 126

Query: 61  LGRQTVYPPGWRQNFNTRDFAELYNLGSPVAAVYFNCQRESGTGGRRR 108
            GRQTV  P  R NFNTR F++  NLG PVAAVYFN QRE  T  RRR
Sbjct: 127 RGRQTVRSPSSRDNFNTRRFSQENNLGLPVAAVYFNAQRE--TAARRR 172


>IMGA|Medtr7g127250.1 PEBP chr07_pseudomolecule_IMGAG_V3
           29786109-29784646 F EGN_Mt090430 20090702
          Length = 174

 Score =  144 bits (363), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 69/109 (63%), Positives = 82/109 (75%), Gaps = 3/109 (2%)

Query: 1   VMVDPDAPSPSDPNLREYLHWLVTDIPATTGVTFGQEIVCYESPRPSLGIHRFVFILFRQ 60
           VM DPD P PSDP LRE+LHW+VTDIP TT  TFG+E+V YE P+P++GIHRFVF+LF+Q
Sbjct: 68  VMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVVSYEIPKPNIGIHRFVFVLFKQ 127

Query: 61  LGRQTVYP-PGWRQNFNTRDFAELYNLGSPVAAVYFNCQRESGTGGRRR 108
             R++V   P  R  FNTR+FA   +LG PVAAVYFN QRE  T  RRR
Sbjct: 128 KNRESVTASPSSRDYFNTRNFASQNDLGLPVAAVYFNAQRE--TAARRR 174


>IMGA|Medtr7g006200.1 PEBP chr07_pseudomolecule_IMGAG_V3
           920474-919320 H EGN_Mt090430 20090702
          Length = 89

 Score =  141 bits (355), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 66/86 (76%), Positives = 74/86 (86%)

Query: 22  LVTDIPATTGVTFGQEIVCYESPRPSLGIHRFVFILFRQLGRQTVYPPGWRQNFNTRDFA 81
           +VT+IPATTG TFGQEIV YESPRP+ GIHR +F+LFRQ  R TV  PGWRQNF TRDFA
Sbjct: 1   MVTNIPATTGTTFGQEIVSYESPRPASGIHRVIFVLFRQPCRHTVLAPGWRQNFITRDFA 60

Query: 82  ELYNLGSPVAAVYFNCQRESGTGGRR 107
           E YNLG PVAA+YFNCQRE+G+GGRR
Sbjct: 61  EFYNLGLPVAALYFNCQRENGSGGRR 86


>IMGA|Medtr2g108000.1 PEBP chr02_pseudomolecule_IMGAG_V3
           25518987-25526865 H EGN_Mt090430 20090702
          Length = 173

 Score =  139 bits (351), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 67/109 (61%), Positives = 82/109 (75%), Gaps = 3/109 (2%)

Query: 1   VMVDPDAPSPSDPNLREYLHWLVTDIPATTGVTFGQEIVCYESPRPSLGIHRFVFILFRQ 60
           VM DPD P PSDP L+E+LHW+VTDIP TT  TFG+E++ YE PRP++GIHRFVF+L++Q
Sbjct: 67  VMTDPDVPGPSDPYLKEHLHWIVTDIPGTTDATFGKEVMKYEMPRPNIGIHRFVFLLYKQ 126

Query: 61  LGRQTVYP-PGWRQNFNTRDFAELYNLGSPVAAVYFNCQRESGTGGRRR 108
             RQTV   P  R  FNT+ FA+  +LG PVAAV+FN QRE  T  RRR
Sbjct: 127 KRRQTVMKIPTSRDLFNTKKFAQDNDLGPPVAAVFFNAQRE--TAARRR 173


>IMGA|Medtr7g099870.1 PEBP chr07_pseudomolecule_IMGAG_V3
           22384098-22384447 H EGN_Mt090430 20090702
          Length = 78

 Score =  118 bits (296), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 53/70 (75%), Positives = 60/70 (85%)

Query: 37  EIVCYESPRPSLGIHRFVFILFRQLGRQTVYPPGWRQNFNTRDFAELYNLGSPVAAVYFN 96
           E+V YE PRP+LGIHRFVF+L  Q  RQ VY PGWRQNFNTR+F E YNLGSPVAAV+FN
Sbjct: 6   EVVSYEKPRPNLGIHRFVFVLLHQQCRQRVYAPGWRQNFNTREFIEFYNLGSPVAAVFFN 65

Query: 97  CQRESGTGGR 106
           CQRE+G+GGR
Sbjct: 66  CQRETGSGGR 75


>IMGA|Medtr4g155400.1 Phosphatidylethanolamine-binding protein
           chr04_pseudomolecule_IMGAG_V3 38349106-38351707 F
           EGN_Mt090430 20090702
          Length = 172

 Score =  113 bits (283), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 55/101 (54%), Positives = 69/101 (68%), Gaps = 1/101 (0%)

Query: 1   VMVDPDAPSPSDPNLREYLHWLVTDIPATTGVTFGQEIVCYESPRPSLGIHRFVFILFRQ 60
           VM DPDAPSPS+P++RE +HW+V DIP  T    G+EI+ Y  P+P +GIHR++ +LF Q
Sbjct: 66  VMTDPDAPSPSEPSMRELIHWIVVDIPGGTNPKRGKEILPYIGPKPPVGIHRYILVLFEQ 125

Query: 61  LGR-QTVYPPGWRQNFNTRDFAELYNLGSPVAAVYFNCQRE 100
            G    V  P  R +FNTR FA   NLG PVA VYFN Q+E
Sbjct: 126 KGPIGMVEQPTSRVSFNTRYFASQMNLGLPVATVYFNSQKE 166


>IMGA|Medtr7g099850.1 PEBP chr07_pseudomolecule_IMGAG_V3
           22382227-22382815 H EGN_Mt090430 20090702
          Length = 130

 Score = 65.9 bits (159), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 6/61 (9%)

Query: 1   VMVDPDAPSPSDPNLREYLHWLVTDIPATTGVTFGQEIVCYESP------RPSLGIHRFV 54
           V+VDPDAPSPS P+ REYLHW+VTDIPAT   +FG  ++ Y  P      +P L +   +
Sbjct: 69  VLVDPDAPSPSYPSFREYLHWMVTDIPATNAASFGMYVITYFHPFHRPKSKPELEVQWII 128

Query: 55  F 55
           +
Sbjct: 129 Y 129


>IMGA|Medtr5g086050.1 PEBP chr05_pseudomolecule_IMGAG_V3
           32969840-32972621 E EGN_Mt090430 20090702
          Length = 89

 Score = 55.1 bits (131), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 1/68 (1%)

Query: 34  FGQEIVCYESPRPSLGIHRFVFILFRQLG-RQTVYPPGWRQNFNTRDFAELYNLGSPVAA 92
           +G+EI+ Y  P+P +GIHR++ +LF Q G    V  P  R +F T  F+   NL   +A 
Sbjct: 16  WGKEIIPYIEPKPPVGIHRYILVLFEQKGPIGMVEQPTSRVSFKTPYFSNQLNLSLHMAT 75

Query: 93  VYFNCQRE 100
           +YFN Q+E
Sbjct: 76  IYFNSQKE 83


>IMGA|AC233673_6.1 PEBP AC233673.1 13786-12948 H EGN_Mt090430
          20090702
          Length = 89

 Score = 45.8 bits (107), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 18/21 (85%), Positives = 21/21 (100%)

Query: 1  VMVDPDAPSPSDPNLREYLHW 21
          VMV+PDAPSPSDPN+REYL+W
Sbjct: 69 VMVNPDAPSPSDPNMREYLYW 89


>IMGA|Medtr7g026480.1 PEBP chr07_pseudomolecule_IMGAG_V3
          6806133-6806933 H EGN_Mt090430 20090702
          Length = 51

 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 18/21 (85%), Positives = 20/21 (95%)

Query: 1  VMVDPDAPSPSDPNLREYLHW 21
          VMVDPD PSPS+PN+REYLHW
Sbjct: 31 VMVDPDGPSPSNPNMREYLHW 51