Jatropha Genome Database
- JcCB0075441.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0075441.10 - phase: 0 /partial
(471 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr3g086860.1 Glutamate decarboxylase; chr03_pseudomolecu... 845 0.0
IMGA|Medtr5g084950.1 Glutamate decarboxylase; chr05_pseudomolecu... 598 e-171
IMGA|Medtr5g084960.1 Glutamate decarboxylase chr05_pseudomolecul... 189 4e-48
IMGA|Medtr7g022250.1 Pyridoxal-dependent decarboxylase; chr07_ps... 97 2e-20
IMGA|Medtr5g083680.1 Glutamate decarboxylase 2, putative chr05_p... 77 2e-14
IMGA|Medtr5g083650.1 Pyridoxal-dependent decarboxylase; Thioredo... 75 9e-14
IMGA|Medtr5g083620.1 Glutamate decarboxylase chr05_pseudomolecul... 61 1e-09
IMGA|Medtr2g008250.1 Pyridoxal-dependent decarboxylase; chr02_ps... 58 1e-08
IMGA|Medtr4g104280.1 Pyridoxal-dependent decarboxylase; chr04_ps... 50 3e-06
>IMGA|Medtr3g086860.1 Glutamate decarboxylase;
chr03_pseudomolecule_IMGAG_V3 20503200-20508077 F
EGN_Mt090430 20090702
Length = 508
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/474 (86%), Positives = 430/474 (90%), Gaps = 3/474 (0%)
Query: 1 MVLSKIASESDVSVHSTFASRYVRESLPRYKMPENSIPKEAAFQIINDELMLDGKPRLNL 60
MVLSK ASESDVSVHSTFASRYVR SLPR+KMPE SIPK+AA+QIINDELMLDG PRLNL
Sbjct: 1 MVLSKTASESDVSVHSTFASRYVRTSLPRFKMPEESIPKDAAYQIINDELMLDGNPRLNL 60
Query: 61 ASFVTTWMEPECDKLIMDAMNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGESEAAVG 120
ASFVTTWMEPECDKLIM ++NKNYVDMDEYPVTTELQNRCVNMIAHLFNAPL E+EAAVG
Sbjct: 61 ASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEENEAAVG 120
Query: 121 VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180
VGTVGSSEAIMLAGLAFKRKWQNKRK EGKPYDKPNIVTGANVQVCWEKFARYFEVELKE
Sbjct: 121 VGTVGSSEAIMLAGLAFKRKWQNKRKQEGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180
Query: 181 VKLSEGCYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKVTGWDTP 240
VKLSEG YVMDP KAVE+VDENTICVAAILGSTLNGEFEDVK LNDLLVEKNK TGWDTP
Sbjct: 181 VKLSEGYYVMDPAKAVELVDENTICVAAILGSTLNGEFEDVKRLNDLLVEKNKETGWDTP 240
Query: 241 IHVDAASGGFIAPFLWPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRSKEDLPEEL 300
IHVDAASGGFIAPF++PELEWDFRLPLVKSINVSGHKYGLVYAG+GW IWRSKEDLPEEL
Sbjct: 241 IHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWAIWRSKEDLPEEL 300
Query: 301 IFHINYLGTDQPTFTLNFSKGSSQIIAQYYQLIRLGYEGYRNVMENCHQNAIVLKEGLEK 360
IFHINYLG DQPTFTLNFSKGSSQ+IAQYYQLIRLGYEGY+NVMENC N IVLKEGLEK
Sbjct: 301 IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYKNVMENCRDNMIVLKEGLEK 360
Query: 361 TGRFNIVSKDIGVPLVAFSLKDNSKHTEFEIADMLRRFGWIVPAYTMPADAQHITVLRVV 420
GRFNIVSKD GVPLVAF+LKD EF+I+D+LRRFGWIVPAY+MP DAQHITVLRVV
Sbjct: 361 MGRFNIVSKDDGVPLVAFTLKDPHNFDEFQISDLLRRFGWIVPAYSMPPDAQHITVLRVV 420
Query: 421 IREDFSRTLAERLVLDITKVLLELDMLPAKI---NAKLIVAAEQNNGKNGTVVV 471
IREDFSRTLAERLV DI KVL ELD L AKI + V + NG VVV
Sbjct: 421 IREDFSRTLAERLVADIEKVLHELDSLTAKIKMLSGTSSVTVHEVVKDNGQVVV 474
>IMGA|Medtr5g084950.1 Glutamate decarboxylase;
chr05_pseudomolecule_IMGAG_V3 32390561-32395009 E
EGN_Mt090430 20090702
Length = 351
Score = 598 bits (1543), Expect = e-171, Method: Compositional matrix adjust.
Identities = 285/325 (87%), Positives = 300/325 (92%)
Query: 1 MVLSKIASESDVSVHSTFASRYVRESLPRYKMPENSIPKEAAFQIINDELMLDGKPRLNL 60
MVLS+ A+ D SVHSTFASRYVR SLPR+KM ENSIPKEAA+QIINDELMLDG PRLNL
Sbjct: 1 MVLSETATHMDASVHSTFASRYVRTSLPRFKMGENSIPKEAAYQIINDELMLDGNPRLNL 60
Query: 61 ASFVTTWMEPECDKLIMDAMNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGESEAAVG 120
ASFVTTWMEPECDKLIM ++NKNYVDMDEYPVTTELQNRCVNMIAHLFNAPL +SE AVG
Sbjct: 61 ASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEDSEPAVG 120
Query: 121 VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180
VGTVGSSEAIMLAGLAFKRKWQN+RK+EGK + PNIVTGANVQVCWEKFARYFEVELKE
Sbjct: 121 VGTVGSSEAIMLAGLAFKRKWQNRRKSEGKSCENPNIVTGANVQVCWEKFARYFEVELKE 180
Query: 181 VKLSEGCYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKVTGWDTP 240
VKL +G YVMDP KA EMVDENTICVAAILGSTLNGEFEDVK LNDLLVEKN TGWDTP
Sbjct: 181 VKLRDGYYVMDPEKAAEMVDENTICVAAILGSTLNGEFEDVKRLNDLLVEKNAETGWDTP 240
Query: 241 IHVDAASGGFIAPFLWPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRSKEDLPEEL 300
IHVDAASGGFIAPFL+PEL WDFRL LVKSINVSGHKYGLVYAG+GW+IWRSKEDLPEEL
Sbjct: 241 IHVDAASGGFIAPFLYPELVWDFRLSLVKSINVSGHKYGLVYAGIGWIIWRSKEDLPEEL 300
Query: 301 IFHINYLGTDQPTFTLNFSKGSSQI 325
IFHINYLG DQPTFTLNFSKG +I
Sbjct: 301 IFHINYLGADQPTFTLNFSKGKHRI 325
>IMGA|Medtr5g084960.1 Glutamate decarboxylase
chr05_pseudomolecule_IMGAG_V3 32395011-32395905 E
EGN_Mt090430 20090702
Length = 171
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 87/140 (62%), Positives = 113/140 (80%), Gaps = 3/140 (2%)
Query: 335 LGYEGYRNVMENCHQNAIVLKEGLEKTGRFNIVSKDIGVPLVAFSLKDNSKHTEFEIADM 394
L ++GYRNVMENC N +VLK+GLEKT RF IVSKD GVPLVAF+LKD++ EF+I+DM
Sbjct: 2 LTWQGYRNVMENCRDNMMVLKDGLEKTERFEIVSKDEGVPLVAFTLKDHNNFNEFQISDM 61
Query: 395 LRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLLELDMLPAKI--- 451
L+R GWI+PAYTMP DA+H+TVLRVVIREDFSRT AERLV+DIT+V+ ELD++P+++
Sbjct: 62 LKRHGWIIPAYTMPPDAEHVTVLRVVIREDFSRTFAERLVIDITRVIHELDLVPSRVVST 121
Query: 452 NAKLIVAAEQNNGKNGTVVV 471
N + E++ +GTV +
Sbjct: 122 NTITVTGGEEDADNDGTVTI 141
>IMGA|Medtr7g022250.1 Pyridoxal-dependent decarboxylase;
chr07_pseudomolecule_IMGAG_V3 5518776-5527735 E
EGN_Mt090430 20090702
Length = 541
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 163/360 (45%), Gaps = 24/360 (6%)
Query: 81 NKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGESEAAV-GVGTVGSSEAIMLAGLAFKR 139
+ N + +D + + V M A L + S + G T G +E+I+LA + R
Sbjct: 157 HTNPLHLDVFQSVVRFEAEVVAMTAALLGSKEKTSGGQICGNMTSGGTESILLA-VKSSR 215
Query: 140 KWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGCYVMDPVKAVEMV 199
+ +K KP ++ + ++K A+YF ++L V + + + D +
Sbjct: 216 DYMKSKKG----ITKPEMIIPESGHSAYDKAAQYFNIKLWRVPVDKN-FQADVKATRRYI 270
Query: 200 DENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKVTGWDTPIHVDAASGGFIAPFL---- 255
++NTI + +G + +K L L + +D HVD GGF+ PF
Sbjct: 271 NKNTIMLVGSSPGFPHGIIDPIKELGQL------ASNFDICFHVDLCLGGFVLPFARELG 324
Query: 256 WPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRSKEDLPEELIFHINYLGTDQPTFT 315
+P +DF + V SI+V HKYGL G V++R+ + + + + G + T
Sbjct: 325 YPIQPYDFTVKGVTSISVDVHKYGLAPKGTSIVLYRNHDIRKHQFVAVTEWSGGLYVSPT 384
Query: 316 LNFSKGSSQIIAQYYQLIRLGYEGYRNVMENCHQNAIVLKEGLEKTGRFNIVSKDIGVPL 375
+ S+ S I + +I LG EGY + + + L++G+E+ ++ + + +
Sbjct: 385 IAGSRPGSLIAGAWAAMISLGKEGYLENTKAIMEGSKKLQKGIEEIPELFVIGRP-DMTI 443
Query: 376 VAFSLKDNSKHTEFEIADMLRRFGWIVPAYTMPADAQHI--TVLRVVIREDFSRTLAERL 433
VAF ++ FE+ DM+ GW + A P ++ HI T+ V + EDF R L E +
Sbjct: 444 VAFG---SNVLDIFEVNDMMSSKGWHLNALQRP-NSIHICVTLQHVPVIEDFLRDLNESV 499
>IMGA|Medtr5g083680.1 Glutamate decarboxylase 2, putative
chr05_pseudomolecule_IMGAG_V3 31761731-31762087 H
EGN_Mt090430 20090702
Length = 118
Score = 77.4 bits (189), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 50/84 (59%)
Query: 372 GVPLVAFSLKDNSKHTEFEIADMLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAE 431
GV ++AFS K + E+ I+ MLR +GWIV AY M AQHI VLR VIR FS L E
Sbjct: 19 GVSVMAFSHKHRRIYNEYTISKMLRHYGWIVLAYQMFLGAQHIIVLRAVIRARFSCALVE 78
Query: 432 RLVLDITKVLLELDMLPAKINAKL 455
RLVL+I V EL K+ L
Sbjct: 79 RLVLNIKIVFRELHKFSLKLRPTL 102
>IMGA|Medtr5g083650.1 Pyridoxal-dependent decarboxylase; Thioredoxin
domain 2 chr05_pseudomolecule_IMGAG_V3 31752615-31753412
H EGN_Mt090430 20090702
Length = 111
Score = 74.7 bits (182), Expect = 9e-14, Method: Composition-based stats.
Identities = 31/42 (73%), Positives = 35/42 (83%)
Query: 252 APFLWPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRSK 293
+ F + LEWDFRLPLVKSINVSGHKYGL Y G+GWVIW S+
Sbjct: 15 SSFPYKMLEWDFRLPLVKSINVSGHKYGLFYIGIGWVIWCSR 56
>IMGA|Medtr5g083620.1 Glutamate decarboxylase
chr05_pseudomolecule_IMGAG_V3 31746151-31746542 H
EGN_Mt090430 20090702
Length = 74
Score = 60.8 bits (146), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 251 IAPFLWPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRSKEDL 296
I F + L+ DFRL LVKSINVSGHK LVY+G+GW+IW S+ +
Sbjct: 27 ILSFPYKMLQRDFRLSLVKSINVSGHKNDLVYSGIGWIIWCSRRGI 72
>IMGA|Medtr2g008250.1 Pyridoxal-dependent decarboxylase;
chr02_pseudomolecule_IMGAG_V3 1485157-1479953 E
EGN_Mt090430 20090702
Length = 486
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 169 KFARYFEVELKEVK-LSEGCYVMDPVKAVEMVDENTICVAAI-LGSTLNGEFEDVKLLND 226
K AR + +E ++V+ L+ G D KA + ++ + + +G+T+ G +D+ D
Sbjct: 209 KAARMYRMECEKVETLNSGEIDCDDFKAKLLRHQDKPAIINVNIGTTVKGAVDDL----D 264
Query: 227 LLVEKNKVTGWDTP---IHVDAASGGFIAPFLWPELEWDFRLPLVKSINVSGHKYGLVYA 283
L+++K + G+ IHVD A G + PF+ + F+ P + S++VSGHK+
Sbjct: 265 LVIQKLEEAGFSQDRFYIHVDGALFGLMMPFVKRAPKVTFKKP-IGSVSVSGHKFVGCPM 323
Query: 284 GVGWVIWRSKEDLPEELIFHINYLGTDQPTFTLNFSKGSSQIIAQYYQLIRLGYEGYRNV 343
G I R + L ++ YL + T + S+ I +Y L R GY G++
Sbjct: 324 PCGVQITRLEH--INALSRNVEYLASRDAT--IMGSRNGHAPIFLWYTLNRKGYRGFQKE 379
Query: 344 MENCHQNAIVLKEGLEKTG 362
++ C +NA K+ L + G
Sbjct: 380 VQKCLRNAHYFKDRLIEAG 398
>IMGA|Medtr4g104280.1 Pyridoxal-dependent decarboxylase;
chr04_pseudomolecule_IMGAG_V3 22696433-22699000 E
EGN_Mt090430 20090702
Length = 452
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 67/153 (43%), Gaps = 6/153 (3%)
Query: 210 LGSTLNGEFEDVKLLNDLLVEKNKVTGWDTPIHVDAASGGFIAPFLWPELEWDFRLPLVK 269
+G+TL G +D+ L+ L +K T IH D A G + PF+ L F+ P +
Sbjct: 213 IGTTLKGGIDDLDLVIQTL-DKCGFTRDQFYIHCDGALFGIMLPFINQALRISFKKP-ID 270
Query: 270 SINVSGHKYGLVYAGVGWVIWRSKEDLPEELIFHINYLGTDQPTFTLNFSKGSSQIIAQY 329
S+ +SGHK+ + G +I R K L + Y+ + T T S+ I +
Sbjct: 271 SVTISGHKFLGCPSPCGVLITRLK--YINALSRDVEYIASRDATIT--GSRSGHAPILLW 326
Query: 330 YQLIRLGYEGYRNVMENCHQNAIVLKEGLEKTG 362
Y L + G G N + C NA L L G
Sbjct: 327 YALKKRGLIGLENEVHECITNARYLLNQLRDAG 359