Jatropha Genome Database

JcCB0071491.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0071491.10 - phase: 2 /partial
         (386 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g149560.1 Flavodoxin/nitric oxide synthase; Sulphite ...   600   e-172
IMGA|Medtr8g129070.1 Flavodoxin/nitric oxide synthase; Sulphite ...   555   e-158
IMGA|Medtr8g129070.2 Flavoprotein pyridine nucleotide cytochrome...   554   e-158
IMGA|Medtr7g121460.1 Flavoprotein pyridine nucleotide cytochrome...   183   1e-46
IMGA|AC235665_1.1 FAD-binding AC235665.2 2725-5080 E EGN_Mt09043...    86   4e-17
IMGA|Medtr5g022240.1 Oxidoreductase FAD/NAD(P)-binding chr05_pse...    70   2e-12
IMGA|Medtr2g129660.1 Oxidoreductase FAD/NAD(P)-binding chr02_pse...    63   2e-10

>IMGA|Medtr3g149560.1 Flavodoxin/nitric oxide synthase; Sulphite
           reductase [NADPH] flavoprotein, alpha chain
           chr03_pseudomolecule_IMGAG_V3 39167161-39159456 F
           EGN_Mt090430 20090702
          Length = 692

 Score =  600 bits (1546), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 279/341 (81%), Positives = 308/341 (90%)

Query: 1   YETGDHVGVYSENFDETVEEAAKLLGQPLDLLFSVYTDNEDGTPLGSSLPPAFPGPCTLR 60
           YETGDHVGVY++N DETV+EA KLLGQ LDLLFS++TDNEDGT LG SL P FPGPCT+R
Sbjct: 326 YETGDHVGVYADNCDETVKEAGKLLGQDLDLLFSLHTDNEDGTSLGGSLLPPFPGPCTVR 385

Query: 61  TALARYADLLNSPRKXXXXXXXXXXSDPSEAERLRFLASPQGKDEYAQWIVASQRSLLEV 120
           TALARYADLLN PRK          S+PSEAERL+FL+SPQGKDEY++W+V S R+LLEV
Sbjct: 386 TALARYADLLNPPRKAALIALAAHASEPSEAERLKFLSSPQGKDEYSKWVVGSHRTLLEV 445

Query: 121 MAEFPSAKPPLGVFFAAVAPRLQPRYYSISSSPRFAPSRVHVTCALVYGPTPTGRIHKGV 180
           MA+FPSAKPPLGVFFAA+APRLQPRYYSISSSPRFAP RVHVTCALV GPTPTGRIHKGV
Sbjct: 446 MADFPSAKPPLGVFFAAIAPRLQPRYYSISSSPRFAPQRVHVTCALVEGPTPTGRIHKGV 505

Query: 181 CSTWMKNAVPLERSSDCSWAPIFIRTSNFKLPSDPSVPIIMVGPGTGLAPFRGFLQERMA 240
           CSTWMKNA+P E S DCSWAPIFIR SNFKLP+DPS+PIIMVGPGTGLAPFRGFLQER A
Sbjct: 506 CSTWMKNAIPSEESRDCSWAPIFIRPSNFKLPADPSIPIIMVGPGTGLAPFRGFLQERFA 565

Query: 241 LKQEGAQLGPALLFFGCRNRRMDFIYEDELNNFVEQGVISELIVAFSREGPQKEYVQHKM 300
           LK++G QLGPALLFFGCRNR+MDFIYE+ELNNFVEQG +SELIVAFSREGP+KEYVQHKM
Sbjct: 566 LKEDGVQLGPALLFFGCRNRQMDFIYEEELNNFVEQGSLSELIVAFSREGPEKEYVQHKM 625

Query: 301 VQKAAQIWAIISQGGYLYVCGDAKGMARDVHRTLHNIVQEQ 341
           + KA+  W++ISQGGYLYVCGDAKGMARDVHRTLH IVQ+Q
Sbjct: 626 MDKASYFWSLISQGGYLYVCGDAKGMARDVHRTLHTIVQQQ 666


>IMGA|Medtr8g129070.1 Flavodoxin/nitric oxide synthase; Sulphite
           reductase [NADPH] flavoprotein, alpha chain
           chr08_pseudomolecule_IMGAG_V3 30351607-30346025 E
           EGN_Mt090430 20090702
          Length = 701

 Score =  555 bits (1431), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 258/342 (75%), Positives = 299/342 (87%), Gaps = 2/342 (0%)

Query: 1   YETGDHVGVYSENFDETVEEAAKLLGQPLDLLFSVYTDNEDGTPLG-SSLPPAFPGPCTL 59
           YETGDHVGVY EN  +TVEEA ++LG   D  FSV+TD+EDG PLG SSLPP FP PCTL
Sbjct: 335 YETGDHVGVYCENLSDTVEEAERILGLSPDTYFSVHTDDEDGKPLGGSSLPPPFP-PCTL 393

Query: 60  RTALARYADLLNSPRKXXXXXXXXXXSDPSEAERLRFLASPQGKDEYAQWIVASQRSLLE 119
           RTALA+YAD+L+SP+K          SDPSEA+RLR LASP GKDEYA+W++ASQRSLLE
Sbjct: 394 RTALAKYADVLSSPKKSALLALAAHASDPSEADRLRHLASPAGKDEYAEWVIASQRSLLE 453

Query: 120 VMAEFPSAKPPLGVFFAAVAPRLQPRYYSISSSPRFAPSRVHVTCALVYGPTPTGRIHKG 179
           VMAEF SAKPP+GVFFA+VAPRLQPRYYSISSSPR APSR+HVTCALV+   PTGRIH+G
Sbjct: 454 VMAEFSSAKPPIGVFFASVAPRLQPRYYSISSSPRVAPSRIHVTCALVHDKMPTGRIHQG 513

Query: 180 VCSTWMKNAVPLERSSDCSWAPIFIRTSNFKLPSDPSVPIIMVGPGTGLAPFRGFLQERM 239
           VCSTWMKN+ PLE+S DCSWAPIF+R SNF+LP+D  VPIIM+GPGTGLAPFRGFLQER+
Sbjct: 514 VCSTWMKNSAPLEKSQDCSWAPIFVRQSNFRLPADNKVPIIMIGPGTGLAPFRGFLQERL 573

Query: 240 ALKQEGAQLGPALLFFGCRNRRMDFIYEDELNNFVEQGVISELIVAFSREGPQKEYVQHK 299
           ALK+EGA+LGP++LFFGCRNR++D+IYEDELN+FV  G +SELIVAFSREGP KEYVQHK
Sbjct: 574 ALKEEGAELGPSVLFFGCRNRQVDYIYEDELNHFVHGGALSELIVAFSREGPTKEYVQHK 633

Query: 300 MVQKAAQIWAIISQGGYLYVCGDAKGMARDVHRTLHNIVQEQ 341
           M++KA+ IW +ISQG Y+YVCGDAKGMA+DVHRTLH I+QEQ
Sbjct: 634 MIEKASDIWNMISQGAYIYVCGDAKGMAKDVHRTLHTILQEQ 675


>IMGA|Medtr8g129070.2 Flavoprotein pyridine nucleotide cytochrome
           reductase chr08_pseudomolecule_IMGAG_V3
           30350021-30346025 E EGN_Mt090430 20090702
          Length = 490

 Score =  554 bits (1427), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 258/342 (75%), Positives = 299/342 (87%), Gaps = 2/342 (0%)

Query: 1   YETGDHVGVYSENFDETVEEAAKLLGQPLDLLFSVYTDNEDGTPLG-SSLPPAFPGPCTL 59
           YETGDHVGVY EN  +TVEEA ++LG   D  FSV+TD+EDG PLG SSLPP FP PCTL
Sbjct: 124 YETGDHVGVYCENLSDTVEEAERILGLSPDTYFSVHTDDEDGKPLGGSSLPPPFP-PCTL 182

Query: 60  RTALARYADLLNSPRKXXXXXXXXXXSDPSEAERLRFLASPQGKDEYAQWIVASQRSLLE 119
           RTALA+YAD+L+SP+K          SDPSEA+RLR LASP GKDEYA+W++ASQRSLLE
Sbjct: 183 RTALAKYADVLSSPKKSALLALAAHASDPSEADRLRHLASPAGKDEYAEWVIASQRSLLE 242

Query: 120 VMAEFPSAKPPLGVFFAAVAPRLQPRYYSISSSPRFAPSRVHVTCALVYGPTPTGRIHKG 179
           VMAEF SAKPP+GVFFA+VAPRLQPRYYSISSSPR APSR+HVTCALV+   PTGRIH+G
Sbjct: 243 VMAEFSSAKPPIGVFFASVAPRLQPRYYSISSSPRVAPSRIHVTCALVHDKMPTGRIHQG 302

Query: 180 VCSTWMKNAVPLERSSDCSWAPIFIRTSNFKLPSDPSVPIIMVGPGTGLAPFRGFLQERM 239
           VCSTWMKN+ PLE+S DCSWAPIF+R SNF+LP+D  VPIIM+GPGTGLAPFRGFLQER+
Sbjct: 303 VCSTWMKNSAPLEKSQDCSWAPIFVRQSNFRLPADNKVPIIMIGPGTGLAPFRGFLQERL 362

Query: 240 ALKQEGAQLGPALLFFGCRNRRMDFIYEDELNNFVEQGVISELIVAFSREGPQKEYVQHK 299
           ALK+EGA+LGP++LFFGCRNR++D+IYEDELN+FV  G +SELIVAFSREGP KEYVQHK
Sbjct: 363 ALKEEGAELGPSVLFFGCRNRQVDYIYEDELNHFVHGGALSELIVAFSREGPTKEYVQHK 422

Query: 300 MVQKAAQIWAIISQGGYLYVCGDAKGMARDVHRTLHNIVQEQ 341
           M++KA+ IW +ISQG Y+YVCGDAKGMA+DVHRTLH I+QEQ
Sbjct: 423 MIEKASDIWNMISQGAYIYVCGDAKGMAKDVHRTLHTILQEQ 464


>IMGA|Medtr7g121460.1 Flavoprotein pyridine nucleotide cytochrome
           reductase chr07_pseudomolecule_IMGAG_V3
           28602996-28605309 E EGN_Mt090430 20090702
          Length = 319

 Score =  183 bits (465), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/293 (37%), Positives = 170/293 (58%), Gaps = 18/293 (6%)

Query: 56  PCTLRTALARYADLLN-SPRKXXXXXXXXXXSDPSEAERLRFLASPQGKDEYAQWIVASQ 114
           P  LRT +    D+ + SPR+              E ERL + ASP+G+D+  Q+    +
Sbjct: 11  PVKLRTFVELTMDVASASPRRYFFEAR----CSEHERERLEYFASPEGRDDLYQYNQKER 66

Query: 115 RSLLEVMAEFPSAKPPLGVFFAAVAPRLQPRYYSISSSPRFAPSRVHVTCALVYGPTPTG 174
           R++LEV+ +FPS + PL  +   + P L+ R +SISSS    P++VH+T ++V   TP  
Sbjct: 67  RTVLEVLKDFPSVQMPLE-WLIQLVPMLKKREFSISSSQSSHPNQVHLTVSVVSWTTPYK 125

Query: 175 RIHKGVCSTWMKNAVPLERSSDCSWAPIFIRTSNFKLPSDPSVPIIMVGPGTGLAPFRGF 234
           R  KG+CS+W+    P +  S     P++ +  +   PS PS+P+I+VGPGTG APFRGF
Sbjct: 126 RKKKGLCSSWLAALDPRDAVS----LPVWFQKGSLPTPS-PSLPLILVGPGTGCAPFRGF 180

Query: 235 LQERMALKQEGAQLGPALLFFGCRNRRMDFIYED-ELNNFVEQGVISE-----LIVAFSR 288
           ++ER AL+ +   + P + FFGC N   DF+Y+D  LN+    GV+SE       VAFSR
Sbjct: 181 IEER-ALQSKTISIAPIIFFFGCWNEDGDFLYKDFWLNHSQNNGVLSESTGGGFYVAFSR 239

Query: 289 EGPQKEYVQHKMVQKAAQIWAIISQGGYLYVCGDAKGMARDVHRTLHNIVQEQ 341
           + P+K YVQHK+ + + ++W ++++G  +Y+ G    M  DV      IV ++
Sbjct: 240 DQPEKVYVQHKLREHSGRVWNLLAEGASVYIAGSLTKMPTDVTSAFEEIVSKE 292


>IMGA|AC235665_1.1 FAD-binding AC235665.2 2725-5080 E EGN_Mt090430
           20090702
          Length = 188

 Score = 85.5 bits (210), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 1/109 (0%)

Query: 90  EAERLRFLASPQGKDEYAQWIVASQRSLLEVMAEFPSAKPPLGVFFAAVAPRLQPRYYSI 149
           E ERL++ +SP+G+D+  Q+    +R++LEV+ +FPS + PL  +   + P L+ R +SI
Sbjct: 58  EKERLQYFSSPEGRDDLYQYNQKERRTVLEVLEDFPSVQMPLE-WLIQLVPMLKTRAFSI 116

Query: 150 SSSPRFAPSRVHVTCALVYGPTPTGRIHKGVCSTWMKNAVPLERSSDCS 198
           SSS    P++VH+T ++V   TP  R  KG+CS+W+    P     D S
Sbjct: 117 SSSQSVHPNQVHLTVSVVSWTTPYKRKKKGLCSSWLATLDPRNGDGDAS 165


>IMGA|Medtr5g022240.1 Oxidoreductase FAD/NAD(P)-binding
           chr05_pseudomolecule_IMGAG_V3 8651184-8654622 E
           EGN_Mt090430 20090702
          Length = 361

 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 93/216 (43%), Gaps = 49/216 (22%)

Query: 145 RYYSISSSP--RFAPSRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAVPLERSSDCSWA 200
           R YSI+SS    F  S+    C   LVY     G + KGVCS ++ +  P          
Sbjct: 140 RLYSIASSALGDFGDSKTVSLCVKRLVY-TNDAGEVVKGVCSNFLCDLRPGSEVQIT--G 196

Query: 201 PIFIRTSNFKLPSDPSVPIIMVGPGTGLAPFRGFLQERMALKQEGAQL-GPALLFFGC-- 257
           P+        +P DP+  +IM+G GTG+APFR FL +    K E  +  G A LF G   
Sbjct: 197 PV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYKFNGLAWLFLGVPT 253

Query: 258 ------------------RNRRMDFIYEDELNNFVEQGVISELIVAFSREGPQKEYVQHK 299
                              N R+DF    E  N  ++G              +K Y+Q +
Sbjct: 254 SSSLLYKEEFEKMKEKAPENFRLDFAVSREQVN--DKG--------------EKMYIQTR 297

Query: 300 MVQKAAQIWAIISQGG-YLYVCGDAKGMARDVHRTL 334
           M Q A ++W ++ +   ++Y+CG  KGM + +   +
Sbjct: 298 MAQYAEELWELLKKDNTFVYMCG-LKGMEKGIDDIM 332


>IMGA|Medtr2g129660.1 Oxidoreductase FAD/NAD(P)-binding
           chr02_pseudomolecule_IMGAG_V3 31398307-31401968 F
           EGN_Mt090430 20090702
          Length = 378

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 29/215 (13%)

Query: 145 RYYSISSS--PRFAPSRVHVTC---ALVYGPTPTGR---IHKGVCSTWMKNAVPLERSSD 196
           R YSI+S+    F   +    C   A+ Y P  TG+      GVCS ++ ++ P ++   
Sbjct: 153 RLYSIASTRYGDFFDGKTASLCVRRAVYYDPE-TGKEDPSKNGVCSNFLCDSKPGDK--- 208

Query: 197 CSWAPIFIRTSNFKL----PSDPSVPIIMVGPGTGLAPFRGFLQERMALKQEGAQLGP-A 251
                I I   + K+      DP+   IM+  GTG+AP+RG+L+          + G  A
Sbjct: 209 -----IKITGPSGKIMLLPEDDPNATHIMIATGTGVAPYRGYLRRMFMESVPTFKFGGLA 263

Query: 252 LLFFGCRNRRMDFIYEDELNNFVEQGVIS-ELIVAFSREGPQ----KEYVQHKMVQKAAQ 306
            LF G  N     +Y+DE   +++    +     A SRE       K YVQ K+ + + +
Sbjct: 264 WLFLGVANSD-SLLYDDEFTKYLKDYPENFRYDRALSREEKNRNGGKMYVQDKIEEYSDE 322

Query: 307 IWAIISQGGYLYVCGDAKGMARDVHRTLHNIVQEQ 341
           I+ ++  G ++Y CG  KGM   +  TL  + + +
Sbjct: 323 IFKLLDNGAHIYFCG-LKGMMPGIQETLKRVAENR 356