Jatropha Genome Database

JcCB0070851.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0070851.20 - phase: 0 
         (151 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g139440.1 hypothetical protein chr07_pseudomolecule_I...   115   7e-27

>IMGA|Medtr7g139440.1 hypothetical protein
           chr07_pseudomolecule_IMGAG_V3 33365576-33364411 H
           EGN_Mt090430 20090702
          Length = 223

 Score =  115 bits (289), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 64/129 (49%), Positives = 85/129 (65%), Gaps = 11/129 (8%)

Query: 11  DSLKISPSREFEDYILQNLPADSHKALNSWQPVEVSIHDVDTDETFKVNLAKKQSFWSEP 70
           DSLKISPS++FE+Y+L+ +   S KAL SW P+ + I+DVDT ET+  NL+KK+SFW +P
Sbjct: 34  DSLKISPSKDFEEYVLEYMNESSRKALESWIPLNILIYDVDTCETYDSNLSKKESFWFDP 93

Query: 71  LPDVGQK-KVA---------SSDLTITMENCFDEYKDMSEMFAYSLHPFRQIIKKRKLSY 120
           +P VG+K KV          S + T+    C+D  K   E F YS+ PFR II+KR L Y
Sbjct: 94  MPLVGEKTKVGKHSFSYSSSSYEETMWELPCYDLEKARKEFF-YSIEPFRHIIRKRDLKY 152

Query: 121 DQEIGLRLV 129
           DQ+IGLR  
Sbjct: 153 DQQIGLRFC 161