Jatropha Genome Database
- JcCB0070021.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0070021.10 - phase: 1 /TE
(585 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr2g117110.1 RNA-directed DNA polymerase (Reverse transc... 233 2e-61
IMGA|Medtr8g024620.1 hypothetical protein chr08_pseudomolecule_I... 226 2e-59
IMGA|Medtr2g005080.1 RNA-directed DNA polymerase (Reverse transc... 224 1e-58
IMGA|Medtr8g034900.1 contains similarity to reverse trancriptase... 215 4e-56
IMGA|Medtr2g034130.1 Polynucleotidyl transferase, Ribonuclease H... 214 1e-55
IMGA|Medtr7g107300.1 RNA-directed DNA polymerase (reverse transc... 201 9e-52
IMGA|Medtr3g138250.1 RNA-directed DNA polymerase (reverse transc... 201 1e-51
IMGA|AC225611_8.1 contains similarity to reverse trancriptase, r... 198 6e-51
IMGA|Medtr1g089710.1 RNA-directed DNA polymerase (Reverse transc... 188 5e-48
IMGA|Medtr1g024000.1 RNA-directed DNA polymerase (Reverse transc... 187 1e-47
IMGA|Medtr3g025680.1 RNA-directed DNA polymerase (reverse transc... 184 1e-46
IMGA|Medtr8g037100.1 hypothetical protein chr08_pseudomolecule_I... 175 6e-44
IMGA|Medtr3g044190.1 RNA-directed DNA polymerase (reverse transc... 165 6e-41
IMGA|Medtr3g019330.1 RNA-directed DNA polymerase (reverse transc... 164 1e-40
IMGA|Medtr2g088060.1 Polynucleotidyl transferase, Ribonuclease H... 155 4e-38
IMGA|Medtr8g021900.1 contains similarity to reverse trancriptase... 155 4e-38
IMGA|Medtr2g111140.1 RNA-directed DNA polymerase (reverse transc... 154 2e-37
IMGA|Medtr8g105650.1 reverse transcriptase, putative; 100033-105... 154 2e-37
IMGA|Medtr3g016900.1 RNA-directed DNA polymerase (Reverse transc... 149 5e-36
IMGA|Medtr5g029030.1 RNA-directed DNA polymerase (reverse transc... 145 4e-35
IMGA|Medtr4g160830.1 Putative ribonuclease H protein At1g65750, ... 142 3e-34
IMGA|Medtr8g125530.1 RNA-directed DNA polymerase (Reverse transc... 141 9e-34
IMGA|Medtr5g088270.1 RNA-directed DNA polymerase (reverse transc... 134 2e-31
IMGA|Medtr5g083870.1 RNA-directed DNA polymerase (reverse transc... 131 8e-31
IMGA|Medtr1g117580.1 hypothetical protein chr01_pseudomolecule_I... 127 1e-29
IMGA|Medtr4g129960.1 Polynucleotidyl transferase, Ribonuclease H... 124 1e-28
IMGA|Medtr3g125040.1 RNA-directed DNA polymerase (reverse transc... 115 4e-26
IMGA|Medtr1g122150.1 contains similarity to reverse trancriptase... 115 5e-26
IMGA|Medtr2g114260.1 hypothetical protein chr02_pseudomolecule_I... 113 2e-25
IMGA|Medtr4g084360.1 Putative ribonuclease H protein At1g65750, ... 113 3e-25
IMGA|Medtr8g053420.1 RNA-directed DNA polymerase (Reverse transc... 105 8e-23
IMGA|Medtr3g024330.1 RNA-directed DNA polymerase (reverse transc... 103 3e-22
IMGA|AC146793_2.1 RNA-directed DNA polymerase, related AC146793.... 102 4e-22
IMGA|Medtr4g079290.1 RNA-directed DNA polymerase (Reverse transc... 97 3e-20
IMGA|Medtr2g095830.1 Lipocalin chr02_pseudomolecule_IMGAG_V3 220... 96 5e-20
IMGA|Medtr5g021560.1 RNA-directed DNA polymerase (reverse transc... 94 2e-19
IMGA|Medtr3g124260.1 Polynucleotidyl transferase, Ribonuclease H... 94 3e-19
IMGA|AC233685_57.1 RNA-directed DNA polymerase (Reverse transcri... 93 4e-19
IMGA|AC233572_22.1 RNA-directed DNA polymerase (Reverse transcri... 92 5e-19
IMGA|Medtr4g084370.1 contains similarity to reverse trancriptase... 92 6e-19
IMGA|Medtr4g084240.1 Polynucleotidyl transferase, Ribonuclease H... 92 8e-19
IMGA|Medtr4g042860.1 contains similarity to reverse trancriptase... 92 9e-19
IMGA|Medtr5g073420.1 RNA-directed DNA polymerase (reverse transc... 90 3e-18
IMGA|Medtr3g009350.1 RNA-directed DNA polymerase (reverse transc... 89 6e-18
IMGA|Medtr2g100330.1 RNA-directed DNA polymerase (reverse transc... 88 1e-17
IMGA|Medtr7g068430.1 RNA-directed DNA polymerase (reverse transc... 86 6e-17
IMGA|Medtr3g043440.1 Polynucleotidyl transferase, Ribonuclease H... 85 8e-17
IMGA|Medtr7g084960.1 RNA-directed DNA polymerase (reverse transc... 84 1e-16
IMGA|Medtr1g084160.1 Ribonuclease H chr01_pseudomolecule_IMGAG_V... 84 2e-16
IMGA|Medtr1g147120.1 Polynucleotidyl transferase, Ribonuclease H... 84 2e-16
IMGA|Medtr5g073410.1 RNA-directed DNA polymerase (reverse transc... 84 3e-16
IMGA|Medtr5g088710.1 RNA-directed DNA polymerase (reverse transc... 83 4e-16
IMGA|Medtr2g100360.1 RNA-directed DNA polymerase (reverse transc... 82 6e-16
IMGA|Medtr4g140270.1 RNA-directed DNA polymerase ; Ribonuclease ... 82 6e-16
IMGA|Medtr2g100610.1 RNA-directed DNA polymerase (reverse transc... 82 7e-16
IMGA|Medtr2g100590.1 Ribonuclease H chr02_pseudomolecule_IMGAG_V... 82 8e-16
IMGA|Medtr3g103220.1 RNA-directed DNA polymerase (reverse transc... 82 9e-16
IMGA|Medtr1g122160.1 contains similarity to reverse trancriptase... 82 1e-15
IMGA|Medtr7g068050.1 hypothetical protein chr07_pseudomolecule_I... 80 3e-15
IMGA|Medtr1g010300.1 RNA-directed DNA polymerase (Reverse transc... 76 4e-14
IMGA|Medtr2g055540.1 RNA-directed DNA polymerase (reverse transc... 75 8e-14
IMGA|Medtr1g089830.1 Polynucleotidyl transferase, Ribonuclease H... 75 8e-14
IMGA|Medtr5g090160.1 Haem peroxidase, plant/fungal/bacterial chr... 75 1e-13
IMGA|Medtr7g021160.1 Ribonuclease H chr07_pseudomolecule_IMGAG_V... 74 2e-13
IMGA|Medtr4g107070.1 Polynucleotidyl transferase, Ribonuclease H... 74 2e-13
IMGA|Medtr3g021630.1 RNA-directed DNA polymerase (reverse transc... 72 9e-13
IMGA|Medtr4g070130.1 RNA-directed DNA polymerase (Reverse transc... 71 1e-12
IMGA|Medtr4g069720.1 RNA-directed DNA polymerase (Reverse transc... 71 1e-12
IMGA|AC233662_12.1 Lipocalin AC233662.1 48072-47128 H EGN_Mt0904... 71 2e-12
IMGA|AC233657_3.1 Lipocalin AC233657.1 16055-16999 H EGN_Mt09043... 71 2e-12
IMGA|Medtr3g030620.1 RNA-directed DNA polymerase (reverse transc... 70 3e-12
IMGA|Medtr4g157980.1 contains similarity to reverse trancriptase... 70 3e-12
IMGA|Medtr8g128940.1 RNA-directed DNA polymerase, related chr08_... 69 7e-12
IMGA|Medtr8g133770.1 hypothetical protein chr08_pseudomolecule_I... 68 1e-11
IMGA|Medtr8g093640.1 Polynucleotidyl transferase, Ribonuclease H... 65 9e-11
IMGA|Medtr6g024980.1 Putative ribonuclease H protein At1g65750, ... 65 1e-10
IMGA|Medtr5g084580.1 RNA-directed DNA polymerase (reverse transc... 65 1e-10
IMGA|Medtr5g040610.1 RNA-directed DNA polymerase (reverse transc... 64 2e-10
IMGA|AC235675_13.1 RNA-directed DNA polymerase (reverse transcri... 64 2e-10
IMGA|AC225507_9.1 Polynucleotidyl transferase, Ribonuclease H fo... 64 2e-10
IMGA|Medtr4g032720.1 RNA-directed DNA polymerase, related chr04_... 63 4e-10
IMGA|Medtr6g015400.1 probable reverse transcriptase At2g02650 -,... 63 5e-10
IMGA|Medtr8g026870.1 Polynucleotidyl transferase, Ribonuclease H... 62 6e-10
IMGA|Medtr3g024790.1 RNA-directed DNA polymerase (Reverse transc... 62 7e-10
IMGA|Medtr1g009220.1 contains similarity to reverse trancriptase... 62 8e-10
IMGA|Medtr2g056130.1 hypothetical protein chr02_pseudomolecule_I... 62 1e-09
IMGA|Medtr5g086160.1 RNA-directed DNA polymerase (reverse transc... 61 2e-09
IMGA|AC233100_8.1 RNA-directed DNA polymerase (reverse transcrip... 61 2e-09
IMGA|Medtr4g036130.1 Polynucleotidyl transferase, Ribonuclease H... 60 2e-09
IMGA|Medtr1g016440.1 probable reverse transcriptase At2g02650 -,... 60 4e-09
IMGA|Medtr1g016370.1 probable reverse transcriptase At2g02650 -,... 60 4e-09
IMGA|Medtr4g021840.1 RNA-directed DNA polymerase, related, putat... 59 9e-09
IMGA|AC232874_27.1 hypothetical protein AC232874.1 84446-85505 H... 59 9e-09
IMGA|Medtr3g147880.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V... 57 2e-08
IMGA|Medtr2g129530.1 RNA-directed DNA polymerase (reverse transc... 57 2e-08
IMGA|Medtr6g094210.1 RNA polymerase Rpb8; chr06_pseudomolecule_I... 57 2e-08
IMGA|Medtr7g127430.1 hypothetical protein chr07_pseudomolecule_I... 57 2e-08
IMGA|Medtr3g103760.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V... 57 2e-08
IMGA|Medtr2g104180.1 RNA-directed DNA polymerase (reverse transc... 57 3e-08
IMGA|Medtr4g107980.1 hypothetical protein chr04_pseudomolecule_I... 56 4e-08
IMGA|Medtr1g025190.1 RNA-directed DNA polymerase, related chr01_... 56 6e-08
IMGA|AC235567_37.1 RNA-directed DNA polymerase (reverse transcri... 55 9e-08
IMGA|Medtr8g119160.1 hypothetical protein chr08_pseudomolecule_I... 55 1e-07
IMGA|Medtr8g073360.1 Shikimate kinase; Carbohydrate kinase, ther... 55 1e-07
IMGA|Medtr8g015930.1 hypothetical protein chr08_pseudomolecule_I... 54 2e-07
IMGA|Medtr3g149300.1 RNA-directed DNA polymerase (reverse transc... 54 2e-07
IMGA|Medtr5g025230.1 RNA-directed DNA polymerase (reverse transc... 54 2e-07
IMGA|Medtr4g129200.1 hypothetical protein chr04_pseudomolecule_I... 54 2e-07
IMGA|Medtr4g023500.1 hypothetical protein chr04_pseudomolecule_I... 54 3e-07
IMGA|Medtr8g109180.1 hypothetical protein chr08_pseudomolecule_I... 53 3e-07
IMGA|Medtr5g034410.1 RNA-directed DNA polymerase (reverse transc... 53 4e-07
IMGA|Medtr7g077260.1 RNA-directed DNA polymerase (reverse transc... 52 6e-07
IMGA|Medtr1g149770.1 contains similarity to reverse trancriptase... 52 7e-07
IMGA|Medtr1g065590.1 Polynucleotidyl transferase, Ribonuclease H... 52 1e-06
IMGA|Medtr1g024010.1 hypothetical protein chr01_pseudomolecule_I... 51 2e-06
IMGA|Medtr7g080740.1 RNA-directed DNA polymerase (reverse transc... 51 2e-06
IMGA|Medtr5g105670.1 Polynucleotidyl transferase, Ribonuclease H... 50 2e-06
IMGA|Medtr3g069130.1 RNA-directed DNA polymerase (reverse transc... 50 2e-06
IMGA|Medtr7g077740.1 RNA-directed DNA polymerase (reverse transc... 50 3e-06
IMGA|Medtr1g105630.1 H+-transporting two-sector ATPase, alpha/be... 50 3e-06
IMGA|AC233668_9.1 RNA-directed DNA polymerase (reverse transcrip... 50 3e-06
IMGA|Medtr6g012820.1 hypothetical protein chr06_pseudomolecule_I... 50 3e-06
IMGA|Medtr1g133000.1 Putative non-LTR retroelement reverse trans... 50 4e-06
IMGA|Medtr2g111150.1 probable reverse transcriptase At2g02650 -,... 50 4e-06
IMGA|Medtr5g100090.1 Polynucleotidyl transferase, Ribonuclease H... 50 4e-06
IMGA|Medtr5g027340.1 RNA-directed DNA polymerase (reverse transc... 49 5e-06
IMGA|Medtr6g092910.1 H+-transporting two-sector ATPase, alpha/be... 49 5e-06
IMGA|Medtr4g101430.1 Polynucleotidyl transferase, Ribonuclease H... 49 5e-06
IMGA|Medtr8g026580.1 H+-transporting two-sector ATPase, alpha/be... 49 5e-06
IMGA|Medtr2g014330.1 hypothetical protein chr02_pseudomolecule_I... 49 5e-06
IMGA|Medtr2g013680.1 hypothetical protein chr02_pseudomolecule_I... 49 5e-06
IMGA|Medtr3g013410.1 RNA-directed DNA polymerase (reverse transc... 49 6e-06
IMGA|Medtr8g109790.1 hypothetical protein chr08_pseudomolecule_I... 49 8e-06
>IMGA|Medtr2g117110.1 RNA-directed DNA polymerase (Reverse
transcriptase); Hemopexin; Polynucleotidyl transferase,
Ribonuclease H fold chr02_pseudomolecule_IMGAG_V3
27457173-27452820 H EGN_Mt090430 20090702
Length = 1147
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/310 (40%), Positives = 183/310 (59%), Gaps = 29/310 (9%)
Query: 2 GFLKERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSF 61
++K+R+W I+ S++ LS+AG+E+LIKSV QA+P+YCMSVF LP + D++EKM+NSF
Sbjct: 587 NYIKDRIWNRISGLSSKMLSQAGKEVLIKSVAQAIPSYCMSVFLLPHSIADDIEKMLNSF 646
Query: 62 WWGSKGSEKK-LHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRV 120
WWG K + + W++W R+ K+ GGMGFR +H F++AM KQ LT+P+ ++ R+
Sbjct: 647 WWGMKNEGRGGIRWMSWERLTMRKEWGGMGFRHIHGFDLAMSGKQCWNFLTNPDAMVSRI 706
Query: 121 FKSKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDG 180
FK+KYF + L A GH+PS+V R I S + LK G +WR+G+G
Sbjct: 707 FKAKYFTNENFLGASLGHNPSYVWRSIWSSRIFLKTGYQWRIGDG--------------- 751
Query: 181 AFYVEDDSLFIDNTLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDIPLSVRDLEDELI 240
T V L+ R W+ I N F+L D+ IL IPL + D +I
Sbjct: 752 -----------STTATVSHLIDAQTRSWNEPLIRNNFNLRDVDEILKIPLLHCEQNDAII 800
Query: 241 WHYDKKGNFSIKSCYYLALRVLGRGDE-SIEGEGWGSIWKFNVAPKVRDFIWRTLRNLLP 299
W +DKKG +S+K+ Y + + VL DE +EG+ +W + PKV+ F+WR R+ LP
Sbjct: 801 WRFDKKGVYSVKNAYRVCVDVLINRDEWKVEGDR-NKLWSLPIPPKVKHFMWRLGRDCLP 859
Query: 300 TRWGLSRRGV 309
R L+ +GV
Sbjct: 860 NRQRLNCKGV 869
>IMGA|Medtr8g024620.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 4663551-4665766 E
EGN_Mt090430 20090702
Length = 587
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/327 (39%), Positives = 180/327 (55%), Gaps = 23/327 (7%)
Query: 15 WSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFWWGSKGSEKK-LH 73
WS++ LSKAGRE++IKSV+Q +P+Y MSVF LP L DE+EKM+N FWWG GS +K +H
Sbjct: 41 WSSQCLSKAGREVMIKSVLQVIPSYIMSVFLLPTTLVDEIEKMVNGFWWGHGGSRRKGIH 100
Query: 74 WLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFKSKYFRDRRLLD 133
WL+W+++ K GGMGF+DL FN+ ML KQG + T N L+ ++FK++YF L
Sbjct: 101 WLSWDKLTVHKNYGGMGFKDLTAFNLVMLGKQGWKFQTQTNCLVSKLFKARYFPSSDYLG 160
Query: 134 AQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGAFYVEDDSLFIDN 193
A+ GH PSFV R I S V++ G + G G+ V++ + + SL ID+
Sbjct: 161 AKLGHKPSFVWRSIFSAKRVIREGGKCVSGEGQNSEVIQ----------HAKIHSL-IDH 209
Query: 194 TLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDIPLSVRDLEDELIWHYDKKGNFSIKS 253
L R W+ I F IL PL + ED+LIW +K G++S++S
Sbjct: 210 NL----------RCWNQDVIHCYFDNSTAQQILKTPLFRQVEEDQLIWKAEKNGHYSVRS 259
Query: 254 CYYLALRVLGRGDESIEGEGWGSIWKFNVAPKVRDFIWRTLRNLLPTRWGLSRRGVNVDT 313
Y + + +G W IWK +PKV++ IWR LPTR L + VN +
Sbjct: 260 AYRICMEEIGDNSYLHRPGFWNGIWKLKASPKVKNLIWRICLGCLPTRAKLLDKRVNCTS 319
Query: 314 TCPYCDLE-EDINHALLLCTKVLEVWR 339
C CD ED H L C + +WR
Sbjct: 320 MCSMCDGNYEDDLHVLFDCQRARSIWR 346
>IMGA|Medtr2g005080.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr02_pseudomolecule_IMGAG_V3 86385-88912
E EGN_Mt090430 20090702
Length = 566
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 134/392 (34%), Positives = 195/392 (49%), Gaps = 82/392 (20%)
Query: 3 FLKERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFW 62
F+K+ +WK IN W R LSKAG+E++IKSV+Q++P+Y MS++ LP + D++EKM+N+FW
Sbjct: 147 FIKDSIWKRINVWRGRALSKAGKEVMIKSVLQSIPSYIMSIYLLPSSVIDDIEKMVNAFW 206
Query: 63 WGSKGSEKKLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFK 122
WG + + + + W+AW M K+ GGMGFR+ FN+AM+AKQG LL++P +L+ RVFK
Sbjct: 207 WGGRSNNRGIKWMAWEHMACPKEFGGMGFRNFKAFNIAMVAKQGWSLLSTPESLVARVFK 266
Query: 123 SKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWL-SIDGA 181
S+YF L A+ VGNG+++SV+ DPW+ + G+
Sbjct: 267 SRYFPRSSFLGAKL-------------------------VGNGQQVSVMNDPWVRGVQGS 301
Query: 182 FYVEDDSLFIDNTLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDIPL----------- 230
S + + L V DL+ + +R WDV KI +LF + ILD PL
Sbjct: 302 CIQSPQSQGV-HILSVSDLIADEDRVWDVDKIESLFPDDMVQAILDTPLFAEVHNDRITW 360
Query: 231 ------------------SVRDLE-------------------------DELIWHYDKKG 247
SV D++ D + W + G
Sbjct: 361 MVECNGSCYILIGSMLKKSVWDVDKIESLFPDDMVQAILDTPLFAEVHNDRITWMVECNG 420
Query: 248 NFSIKSCYYLALRVLGRGDESIEGEGWGSIWKFNVAPKVRDFIWRTLRNLLPTRWGLSRR 307
++I + Y +A+ L D E W IWK N K R+ +WR R +PTR L R
Sbjct: 421 RYTINTGYKIAMMELLHTDRFHVEEEWKRIWKVNSHHKARNLLWRICRGCVPTRLRLQSR 480
Query: 308 GVNVDTTCPYCD-LEEDINHALLLCTKVLEVW 338
V + CP CD + ED HA + CT E W
Sbjct: 481 HVQCEVICPSCDTVVEDDWHAFVGCTVACESW 512
>IMGA|Medtr8g034900.1 contains similarity to reverse trancriptase,
related, putative chr08_pseudomolecule_IMGAG_V3
7642559-7645649 E EGN_Mt090430 20090702
Length = 541
Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 112/327 (34%), Positives = 184/327 (56%), Gaps = 5/327 (1%)
Query: 3 FLKERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFW 62
F+ +R+WK + W + LS GR LI+++ QA+P Y MS F LP LC+++EK + +FW
Sbjct: 15 FIMDRIWKKLKGWKEKSLSFEGRGTLIRAIAQAIPTYVMSCFLLPKGLCEKIEKAVCAFW 74
Query: 63 WGSKGSEKKLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFK 122
WG S++K+HW + + GGMGF+ L FNMAMLAKQ R T+ +L+ RVFK
Sbjct: 75 WGGSDSKRKIHWTKKENLFKPRHKGGMGFKILRDFNMAMLAKQVWRFQTNQKSLISRVFK 134
Query: 123 SKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGAF 182
+KYF + +L G++ S+ R I V++ G W++GNG+++ + +D W+
Sbjct: 135 AKYFPYQDILQTNLGYNLSYAWRSIFHSIWVIQKGSCWKIGNGQKVRIWEDNWIPTHQNL 194
Query: 183 YVEDDSLFIDNTLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDIPLSVRDLEDELIWH 242
+ ++ + +LVKDL+ E W+ + + F +D I IPL +DE+IWH
Sbjct: 195 RIFTPNMGNPDVVLVKDLINTDEPSWNNSILNTHFLSIDKDQIECIPLINLANDDEIIWH 254
Query: 243 YDKKGNFSIKSCY-----YLALRVLGRGDESIEGEGWGSIWKFNVAPKVRDFIWRTLRNL 297
+++ GN++++S Y + + + +IE W +W + P+ + +WR L N
Sbjct: 255 FNQDGNYTVRSGYQAIQNWKITTISEPSNSNIETNLWKKLWTIHTIPRHKMILWRVLNNT 314
Query: 298 LPTRWGLSRRGVNVDTTCPYCDLEEDI 324
LP R L +RG+ + CP LE++I
Sbjct: 315 LPLRSELGKRGILCNPLCPRYLLEDEI 341
>IMGA|Medtr2g034130.1 Polynucleotidyl transferase, Ribonuclease H
fold chr02_pseudomolecule_IMGAG_V3 9482517-9480709 E
EGN_Mt090430 20090702
Length = 602
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 182/342 (53%), Gaps = 14/342 (4%)
Query: 6 ERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFWWGS 65
+R+ K + W + LS GR +LI++V QA+P Y MS + LP+ LC+++E+ + +FWWG
Sbjct: 2 DRIRKKLKGWKEKNLSFEGRGVLIRAVAQAIPVYVMSCYLLPISLCEDIERAVCNFWWGG 61
Query: 66 KGSEKKLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFKSKY 125
+K+HW++ + KK+GGMGF+ L FN+AMLAKQ RL P++LL + K+KY
Sbjct: 62 TEHTRKIHWVSKQILFKQKKEGGMGFKILRDFNLAMLAKQIWRLHIYPDSLLAKCLKAKY 121
Query: 126 FRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGAF--- 182
+ + +L A G++PS+ R + +L G WR+GNG ++ + D WL + +
Sbjct: 122 YPNSDVLKATAGYNPSYAWRSLQKSIWILNKGCCWRIGNGDQVHIQSDNWLPYNNGYKPI 181
Query: 183 YVEDDSLFIDNTLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDIPLSVRDLEDELIWH 242
Y +S +VKDLL E W+ + F MD I +P+ + D L+W
Sbjct: 182 YSNPNS-----PPMVKDLLTEFPFDWNYNLLQQNFLPMDSSQIAQLPIIHPNKPDVLMWM 236
Query: 243 YDKKGNFSIKSCY-----YLALRVLGRGDESIEGEGWGSIWKFNVAPKVRDFIWRTLRNL 297
+D G++++KS Y + A S+ W +W P+ + +WR L N
Sbjct: 237 FDLSGSYTVKSGYNAIQNWKATASNDSSASSVNNTLWQKLWNLKTIPRHKSLLWRILNNS 296
Query: 298 LPTRWGLSRRGVNVDTTCPYCDL-EEDINHALLLCTKVLEVW 338
LP R L RRG+ CP C++ EE + H + C+ VW
Sbjct: 297 LPLRDNLLRRGIQCSILCPRCNIKEETMTHLFMRCSHSERVW 338
>IMGA|Medtr7g107300.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr07_pseudomolecule_IMGAG_V3
25061037-25062481 E EGN_Mt090430 20090702
Length = 407
Score = 201 bits (511), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 119/345 (34%), Positives = 185/345 (53%), Gaps = 12/345 (3%)
Query: 3 FLKERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFW 62
F+ ER+WK W + LS GR +LIK+V QA+P Y MS F LP LC ++EK + SFW
Sbjct: 47 FIMERIWKKHKGWKKKCLSFEGRGVLIKAVAQAIPTYYMSCFMLPKGLCTKIEKAICSFW 106
Query: 63 WGSKGSEKKLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFK 122
WG+ KK+HW++ ++ SK GG+GF+ L FN+AMLAK+ R T+PN+L+ + FK
Sbjct: 107 WGTTDKNKKMHWVSKKKLFRSKHSGGLGFKTLRDFNLAMLAKKVRRFYTNPNSLIAKCFK 166
Query: 123 SKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGAF 182
+ Y+ +L A+ G++PS+ + I + V+ G WR+G+G I++ +D W+
Sbjct: 167 ANYYPHTDILQAKVGNYPSYAWKSIQNAIWVISKGSCWRIGDGGSINIWEDNWVPTYKGL 226
Query: 183 YV---EDDSLFIDNTLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDIPLSVRDLEDEL 239
V + + F++ VKDL+ E W+ + + F ++I I IPL D L
Sbjct: 227 KVMTTKGPNHFVNR---VKDLINNQESLWNKVILEDQFISINIDQISHIPLVNTTNPDSL 283
Query: 240 IWHYDKKGNFSIKSCY-----YLALRVLGRGDESIEGEGWGSIWKFNVAPKVRDFIWRTL 294
+W ++ G +S+KS Y + ++ S E W IW + P+ + +WR L
Sbjct: 284 MWMHNPTGIYSVKSGYNTLRTWQTQQINNTSTSSDETLIWKKIWSLHTIPRHKVLLWRIL 343
Query: 295 RNLLPTRWGLSRRGVNVDTTCPYCDLE-EDINHALLLCTKVLEVW 338
+ LP R L +RG+ CP C + E I H + C VW
Sbjct: 344 NDSLPVRSSLRKRGIQCYPLCPRCHSKTETITHLFMSCPLSKRVW 388
>IMGA|Medtr3g138250.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
35324945-35323011 H EGN_Mt090430 20090702
Length = 613
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 187/364 (51%), Gaps = 46/364 (12%)
Query: 3 FLKERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFW 62
FL +R+W + W + LS GR ILI++V QA+ Y MS F LP LCD++EK + +FW
Sbjct: 39 FLMDRVWNKLKGWKEKSLSFEGRGILIRAVAQAISTYIMSCFLLPKGLCDKIEKAVCAFW 98
Query: 63 WGSKGSEKKLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFK 122
WGS +++K+HW + SK +GGMGF L FN+AMLAKQ R T PN+L+ R +K
Sbjct: 99 WGSTDNKRKIHWTKKENLFKSKLEGGMGFNILRDFNLAMLAKQDWRFHTEPNSLISRCYK 158
Query: 123 SKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGAF 182
+KY+ +L A G++PS+ R I + ++K G WR+GNG+
Sbjct: 159 AKYYPHCNVLQATIGNNPSYAWRSIFNALWIIKKGSCWRIGNGQ---------------- 202
Query: 183 YVEDDSLFIDNTLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDIPLSVRDLEDELIWH 242
+DL++ W+ + N F +D I IP+ D L+W
Sbjct: 203 ---------------EDLIMVNSSTWNSELLNNQFLGIDTEAIEQIPIIDIFHRDTLMWM 247
Query: 243 YDKKGNFSIKSCYYLALRVLGRGDESI------EGEGWGSIWKFNVAPKVRDFIWRTLRN 296
++K G++++KS Y A+++ G ++ + W IW + P+ + +WR L N
Sbjct: 248 FEKTGSYTVKSG-YTAIQIWKNGSQNSPSSSSENTKLWKKIWNLHTIPRHKTILWRILNN 306
Query: 297 LLPTRWGLSRRGVNVDTTCPYCDLE-EDINHALLLCTKVLEVWRVCRVEEAFTNLSFKSL 355
+P R L +RGV CP C+ + E +H + C + ++W +NL+ K+L
Sbjct: 307 SIPLRSELGKRGVLCSPLCPRCETKIETTDHIFMHCPNISKIW-------FRSNLNLKTL 359
Query: 356 YLQV 359
L +
Sbjct: 360 DLPI 363
>IMGA|AC225611_8.1 contains similarity to reverse trancriptase,
related, putative AC225611.10 67770-68780 H EGN_Mt090430
20090702
Length = 336
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 165/304 (54%), Gaps = 7/304 (2%)
Query: 2 GFLKERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSF 61
FL +R+WK + W + LS GR +LI+ V QA+P Y MS F LP +CD +E+ + SF
Sbjct: 14 NFLMDRIWKKLKGWKEKSLSFEGRGVLIRVVAQAIPTYIMSCFLLPKSICDRIERAICSF 73
Query: 62 WWGSKGSEKKLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVF 121
WWGS +++K+HW+ + + K DGGMGFR+L FN+AMLAKQ RL T P +L+ R +
Sbjct: 74 WWGSNETKRKIHWIKKDHLFKFKHDGGMGFRNLRDFNLAMLAKQVWRLHTQPQSLIARCY 133
Query: 122 KSKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGA 181
K++Y+ + +L G++PS+ R I ++ G R+GNG + +D W+
Sbjct: 134 KARYYPNSDVLQVSQGYNPSYAWRSISQSIWIINKGSCKRIGNGYNTKIWEDNWIPYHSN 193
Query: 182 FYVEDDSLFIDNTLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDIPLSVRDLEDELIW 241
F V L N LVKDL+ + +W+ + F + I IPL + DEL+W
Sbjct: 194 FKVLSPKLDTTNINLVKDLIQDNGTEWNTDILQANFIPYEQDLIKQIPLINHNNSDELMW 253
Query: 242 HYDKKGNFSIKSCYYLALRVLGRGDE------SIEGEGWGSIWKFNVAPKVRDFIWRTLR 295
D G +++KS Y A++ + D+ + + W +W P+ + +WR +
Sbjct: 254 MKDTDGLYTVKSGYQ-AIQSWKQNDQDRPTTSNTSPKIWKKLWALQTIPRHKMLMWRIIN 312
Query: 296 NLLP 299
N LP
Sbjct: 313 NALP 316
>IMGA|Medtr1g089710.1 RNA-directed DNA polymerase (Reverse
transcriptase); Histone H2B; Histone-fold;
Polynucleotidyl transferase, Ribonuclease H fold
chr01_pseudomolecule_IMGAG_V3 17931605-17934389 E
EGN_Mt090430 20090702
Length = 802
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 174/335 (51%), Gaps = 17/335 (5%)
Query: 2 GFLKERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSF 61
++ +++ K + W R LS AGR +LIK+V+QA+ + MS F LP CD +E+ + F
Sbjct: 171 NYIMDKVIKKMKGWKERNLSFAGRSVLIKAVVQAIHVFVMSCFLLPQETCDNIERAVCKF 230
Query: 62 WWGSKGSEKKLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVF 121
WWGS G KK+HW+ +++ S DGG+GFR+L FNM MLAKQ RL T+ L+ +VF
Sbjct: 231 WWGSNGDNKKIHWVKKDKVLRSTIDGGLGFRNLRDFNMVMLAKQIWRLHTNQQALISKVF 290
Query: 122 KSKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGA 181
K+KY+ +L A G+ PS+ R +L G +VGNG I + KD WL
Sbjct: 291 KAKYYPTTDVLQATVGYAPSYAWRSFHQAIWILNKGCCMKVGNGASIDIWKDQWLHNQIG 350
Query: 182 FYVEDDSLFIDNTLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDIPL----SVRDLED 237
F V + +DN V+DL+++ ++W+ I ++F + + L R L
Sbjct: 351 FKVLTHNPGVDNVERVQDLIIDNPQRWNKDLIEHIFLFFLKEPLFNKSLLPSTKARTLSC 410
Query: 238 ELIWHYDKKGNFSIKSCYYLALRVLGRGDESIEGEGWGSIWKFNVAPKVRDFIWRTLRNL 297
I + + N +K L+ GR +++ IW + P+ R +WR +
Sbjct: 411 GCIMNLE---NTLLKRATLLSR--FGRPNKT-------KIWSLDTIPRHRVLLWRIINKA 458
Query: 298 LPTRWGLSRRGVNVDTTCPYCDLE-EDINHALLLC 331
LP R L +RG+N CP C+ E I+H L C
Sbjct: 459 LPVREELHKRGINCSLLCPRCEEGIETIDHLFLNC 493
>IMGA|Medtr1g024000.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr01_pseudomolecule_IMGAG_V3
5513052-5515983 E EGN_Mt090430 20090702
Length = 591
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 170/340 (50%), Gaps = 78/340 (22%)
Query: 6 ERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFWWGS 65
+R+WK IN+W R LSKAG+E++IKSV+Q++P+Y MS++ +P + D++EKM+N+FWWG
Sbjct: 251 DRIWKRINAWRGRALSKAGKEVMIKSVLQSIPSYIMSIYLMPSSVIDDIEKMINAFWWGG 310
Query: 66 KGSEKKLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFKSKY 125
+ + + + W+AW RM K+ GGMGF + FN+AM+AKQG L+ +L+ RVF+++Y
Sbjct: 311 RSNNRGIKWMAWERMACPKEFGGMGFMNFKAFNIAMVAKQGWSFLSKLESLVARVFEARY 370
Query: 126 FRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGAFYVE 185
F L A+ G++ SF R I + +L HG RW VGNG+++SV+ DPW+ V+
Sbjct: 371 FPRSSFLGAKLGNNLSFAWRSIWNSRQILLHGCRWTVGNGQQVSVMNDPWVR-----GVQ 425
Query: 186 DDSLFIDNTLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDIPLSVRDLEDELIWHYDK 245
DD + ILD PL D + W ++
Sbjct: 426 DDM---------------------------------VQVILDTPLFAEVQNDRITWMMER 452
Query: 246 KGNFSIKSCYYLAL-----RVLGRGDESIEGEG-WGSIWKFNVAPKVRDFIWRTLRNLLP 299
+ +K+ Y LA+ R+ + + +G W IWK
Sbjct: 453 NRRYIVKTDYKLAMMELLWRIYCQDCYKLAIKGAWQRIWK-------------------- 492
Query: 300 TRWGLSRRGVNVDTTCPYCD-LEEDINHALLLCTKVLEVW 338
CP+CD + ED +A + CT E W
Sbjct: 493 -------------VICPWCDTIVEDDWNAFVGCTVARESW 519
>IMGA|Medtr3g025680.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
6753317-6752601 H EGN_Mt090430 20090702
Length = 238
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 139/209 (66%), Gaps = 2/209 (0%)
Query: 3 FLKERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFW 62
F+K+++W+ INSW R LSKAG+E++IKS +Q++P Y MS+F +P L DE+EKMMNSFW
Sbjct: 12 FIKDQVWRKINSWGGRSLSKAGKEVMIKSALQSIPTYFMSIFLIPSSLGDEIEKMMNSFW 71
Query: 63 WGSKGSEKK-LHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVF 121
WG+ G+ K + WL+W ++ K+ GGMGF++L+ FNMA+L KQ RL+ P L+ R+F
Sbjct: 72 WGNGGNRNKGIRWLSWYKLYVHKRSGGMGFKNLYMFNMALLGKQVWRLMCQPELLIARLF 131
Query: 122 KSKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGA 181
K++Y++ + +A+ G++ S+V + I ++K G RW++G +I V +D WL ++G
Sbjct: 132 KARYYQRNDIFEAKKGNNSSYVWKSIHEAIPMVKQGTRWKIGKKDKIRVFQDRWL-MNGG 190
Query: 182 FYVEDDSLFIDNTLLVKDLLVEGERQWDV 210
L VK+LL G++ WD+
Sbjct: 191 LAQPAAQYNQLLQLNVKELLQPGQKSWDL 219
>IMGA|Medtr8g037100.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 7957038-7958530 H
EGN_Mt090430 20090702
Length = 410
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 137/242 (56%), Gaps = 3/242 (1%)
Query: 99 MAMLAKQGXRLLTSPNTLLYRVFKSKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGV 158
MAML KQG R+LT P+TL+ R++K++YF L+A+ GH+PSFV R I +L+ G
Sbjct: 1 MAMLGKQGWRILTKPDTLIARIYKARYFPRCNFLEAELGHNPSFVWRSIYKSKFILRAGS 60
Query: 159 RWRVGNGRRISVVKDPWLSIDGAFYVEDDSLFIDNTLLVKDLLVEGERQWDVAKIINLFS 218
RW++G+G ISV + W+ + + DD L V D L+ ++ WDV + ++FS
Sbjct: 61 RWKIGDGMSISVWNNYWMKDNVTIFPLDDVATTLANLRVSDCLLPNQKSWDVPFLHSIFS 120
Query: 219 LMDIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCYYLAL-RVLGRGDESIEGEGWGSI 277
+ I+ PL ED+LIW + +S++S Y L L +L +EG W +
Sbjct: 121 EQIVEHIVATPLYSSVREDQLIWKKENNEEYSVRSAYRLCLNELLDTSHFKVEG-AWDLV 179
Query: 278 WKFNVAPKVRDFIWRTLRNLLPTRWGLSRRGVNVDTTCPYCDLEEDIN-HALLLCTKVLE 336
WK V P+V++ IWR RN LPTR L +GVN T C C+LEE+ + H L C +
Sbjct: 180 WKLKVPPRVKNLIWRICRNFLPTRKRLRDKGVNCTTVCALCNLEEEGSMHLLFKCAGSMN 239
Query: 337 VW 338
+W
Sbjct: 240 IW 241
>IMGA|Medtr3g044190.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
12265782-12266442 H EGN_Mt090430 20090702
Length = 195
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 112/173 (64%), Gaps = 1/173 (0%)
Query: 41 MSVFELPLCLCDELEKMMNSFWWGSKGSEKK-LHWLAWNRMCGSKKDGGMGFRDLHCFNM 99
MS+F LP LCDE+EKMMNSFWWG GS +K +H ++W+++ KKDGGM F+ L FNM
Sbjct: 1 MSLFTLPSSLCDEIEKMMNSFWWGHSGSHRKGIHRMSWDKLSMHKKDGGMSFKSLGTFNM 60
Query: 100 AMLAKQGXRLLTSPNTLLYRVFKSKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVR 159
AML KQG R+LT P+TL+ R++K++YF L+A+ GH+PSFV R I +L+ G R
Sbjct: 61 AMLGKQGWRILTKPDTLIARIYKARYFPRCNFLEAELGHNPSFVWRSICKSKFILRAGSR 120
Query: 160 WRVGNGRRISVVKDPWLSIDGAFYVEDDSLFIDNTLLVKDLLVEGERQWDVAK 212
W++G+G ISV + W+ + + DD L V D L+ ++ WD K
Sbjct: 121 WKIGDGTSISVWNNYWMKDNVTIFPLDDVATTLANLRVSDCLLPNQKSWDCVK 173
>IMGA|Medtr3g019330.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
3889810-3888042 H EGN_Mt090430 20090702
Length = 489
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 153/301 (50%), Gaps = 48/301 (15%)
Query: 28 LIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFWWG-SKGSEKKLHWLAWNRMCGSKKD 86
+IKSV+QA+ +Y MS+F+LP L +E+MMNSFWWG + + + ++WL+W ++ K
Sbjct: 1 MIKSVLQAIMSYVMSLFQLPTTLITTIERMMNSFWWGHDRSTHQSINWLSWEKLSMHKSH 60
Query: 87 GGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFKSKYFRDRRLLDAQTGHHPSFVSRV 146
GGMGF+DL FN+AML KQG + L+ N+L+ F
Sbjct: 61 GGMGFKDLSAFNLAMLGKQGWKFLSDTNSLVTPRF------------------------- 95
Query: 147 IMSFNMVLKHGVRWRVGNGRRISVVKDPWL----SIDGA----FYVEDDSLFIDNTLLVK 198
+++ RW + +G + ++ P L SIDG+ FYV D V+
Sbjct: 96 ------IVRGRARWSISSGVSLPILDAPLLSNGESIDGSITEGFYVRD--------FKVQ 141
Query: 199 DLLVEGERQWDVAKIINLFSLMDIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCYYLA 258
L+ E ++ +V + +FS + IL+ PL + +D LIW ++ G ++++S Y L
Sbjct: 142 SLISEHGKRRNVPLVRQVFSNDIVDAILNTPLYDQVHQDRLIWKAERNGCYTVRSAYRLC 201
Query: 259 LRVLGRGDESIEGEGWGSIWKFNVAPKVRDFIWRTLRNLLPTRWGLSRRGVNVDTTCPYC 318
+ L W +IW+ V PKV++ + R R LPTR L +GV+ T C C
Sbjct: 202 VEKLMDVSYLHRPGSWNNIWRLKVPPKVKNLLVRMCRGCLPTRARLQDKGVSCPTNCGSC 261
Query: 319 D 319
D
Sbjct: 262 D 262
>IMGA|Medtr2g088060.1 Polynucleotidyl transferase, Ribonuclease H
fold chr02_pseudomolecule_IMGAG_V3 19822787-19820648 H
EGN_Mt090430 20090702
Length = 612
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 139/272 (51%), Gaps = 14/272 (5%)
Query: 80 MCGSKKDGGMGF---RDLHCFN------MAMLAKQGXRLLTSPNTLLYRVFKSKYFRDRR 130
M G K+ GF R H N ++ ++G R T L+ R+FK++YF +
Sbjct: 77 MVGRSKEATFGFIKDRIWHKINSWSSKCLSKAGREGWRFQTESTNLVCRLFKARYFPNSD 136
Query: 131 LLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGAFYVEDDSLF 190
+ ++ GH+PS+V R I S +V+K G RWR+G+G I + PWL DG + +F
Sbjct: 137 FIGSKIGHNPSYVWRSIFSAKIVVKQGARWRIGSGVNIPFLGAPWLK-DGLSLSITNPIF 195
Query: 191 IDNTLLVK--DLLVEGERQWDVAKIINLFSLMDIHTILDIPLSVRDLEDELIWHYDKKGN 248
+ + VK D + + + W I +LF IL+ PL LED++IW +K G
Sbjct: 196 -EPLMQVKLCDFIEQDVKMWKAPLIHSLFDAQTAELILNTPLQPLVLEDKMIWKGEKNGT 254
Query: 249 FSIKSCYYLALRVLGRGDESIEGEGWGSIWKFNVAPKVRDFIWRTLRNLLPTRWGLSRRG 308
+S+KS Y + + + W IWK V PK++ F+WR R PTR L+ RG
Sbjct: 255 YSLKSAYRICVTEIADNSHMHVNGRWNLIWKLKVPPKIKKFLWRVCRGCFPTRARLNSRG 314
Query: 309 VNVDTTCPYCDLE-EDINHALLLCTKVLEVWR 339
V+ C +C+ ED H L+ C KV++VWR
Sbjct: 315 VSCPLDCVHCNHNYEDSIHILIECPKVVQVWR 346
>IMGA|Medtr8g021900.1 contains similarity to reverse trancriptase,
related, putative chr08_pseudomolecule_IMGAG_V3
4206337-4207793 E EGN_Mt090430 20090702
Length = 357
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 119/205 (58%)
Query: 3 FLKERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFW 62
F+ ER+ + W R LS +GR +LI++VIQALP Y MS+F +P +CD++E+ + FW
Sbjct: 133 FIMERVRAKLKGWKERNLSFSGRGVLIRAVIQALPTYVMSMFLIPEGICDKIEQAICRFW 192
Query: 63 WGSKGSEKKLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFK 122
WG +++HW + + K GG GFR + FN A+LAKQ RL+ P + L K
Sbjct: 193 WGGNEDRRRIHWKNKDFLFKPKFSGGQGFRTMRSFNEALLAKQVWRLIKYPTSFLATCLK 252
Query: 123 SKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGAF 182
+K+F + +L A+ G+ PSFV I ++K G RW +G+G++I V D WL F
Sbjct: 253 AKHFPNTDVLKAKLGNQPSFVWSSIYHTKWIIKKGGRWLIGDGKKIDVWDDNWLPHQNGF 312
Query: 183 YVEDDSLFIDNTLLVKDLLVEGERQ 207
+ +VKDL+VEG+++
Sbjct: 313 KTVSKPTNNIDIRIVKDLMVEGQKK 337
>IMGA|Medtr2g111140.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
26300425-26300964 H EGN_Mt090430 20090702
Length = 179
Score = 154 bits (388), Expect = 2e-37, Method: Composition-based stats.
Identities = 70/178 (39%), Positives = 118/178 (66%)
Query: 28 LIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFWWGSKGSEKKLHWLAWNRMCGSKKDG 87
+IK V+Q++P+Y MS++ LP + D++EKM+N+FWWG + + + + W+AW R+ K+ G
Sbjct: 1 MIKYVLQSIPSYIMSIYLLPNSVIDDIEKMINAFWWGGRSNNRGIKWMAWERVACPKEFG 60
Query: 88 GMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFKSKYFRDRRLLDAQTGHHPSFVSRVI 147
GM FR+ FN+AM+AKQG L+ P++L+ R+FKS+YF L A+ G++PSF R I
Sbjct: 61 GMRFRNFKAFNIAMVAKQGWSFLSKPDSLVARIFKSRYFPRSSFLGAKLGNNPSFAWRSI 120
Query: 148 MSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGAFYVEDDSLFIDNTLLVKDLLVEGE 205
+ +L +G RW +G+G+++SV+ DPW+ +++ ++L V DL+ + E
Sbjct: 121 WNSCQLLLYGCRWTIGDGQQVSVMNDPWVRGVHGSWIQSPQGQDVHSLPVSDLIADEE 178
>IMGA|Medtr8g105650.1 reverse transcriptase, putative;
100033-105622, related chr08_pseudomolecule_IMGAG_V3
23385469-23384651 H EGN_Mt090430 20090702
Length = 244
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 133/253 (52%), Gaps = 28/253 (11%)
Query: 3 FLKERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFW 62
F+ +R+WK + W + LS GR LI++V QA+P Y MS F LP LC+++EK++ +FW
Sbjct: 15 FIMDRIWKKLKGWKEKSLSFEGRGTLIRAVAQAIPTYVMSCFLLPKGLCEKIEKVVCAFW 74
Query: 63 WGSKGSEKKLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFK 122
WG S+KK+HW + + GGMGF+ L FNMAMLAKQ
Sbjct: 75 WGGTDSKKKIHWTKRENLFKPRHKGGMGFKILRDFNMAMLAKQ----------------- 117
Query: 123 SKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGAF 182
A G+ PS+ R I V++ G W++GNG+++ + +D W+ F
Sbjct: 118 -----------ANLGYSPSYAWRSIFHSIWVIQKGSCWKIGNGQKVRIWEDNWIPTHHNF 166
Query: 183 YVEDDSLFIDNTLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDIPLSVRDLEDELIWH 242
+ +L + +LVKDL E W+ + + F +D I IPL +DE++WH
Sbjct: 167 RIFTPNLGNPDVVLVKDLTNMDEPSWNNSILNTHFLSIDKDQIECIPLINLANDDEIMWH 226
Query: 243 YDKKGNFSIKSCY 255
+++ G +++ S Y
Sbjct: 227 FNQDGKYTVHSGY 239
>IMGA|Medtr3g016900.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
3397609-3394716 E EGN_Mt090430 20090702
Length = 703
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 140/278 (50%), Gaps = 22/278 (7%)
Query: 18 RFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFWWGSKGSEKKLHWLAW 77
R LS + R +LI++VIQA+P+Y +SV F WG ++++HW +
Sbjct: 438 RNLSFSSRGVLIRAVIQAIPSY-LSV----------------DFGWGGSEEKRRIHWKSK 480
Query: 78 NRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFKSKYFRDRRLLDAQTG 137
+ SK +GG GFR +H FN A+ AKQ RL+ P TL+ + K+KY+ LL A+ G
Sbjct: 481 EVLFKSKFNGGQGFRTMHHFNEALFAKQAWRLIHQPQTLISKCLKAKYYPHTDLLRARRG 540
Query: 138 HHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGAFYVEDDSLFIDNTLLV 197
+PSFV I V++ G W++GNG +++V +D W+ F + + V
Sbjct: 541 RNPSFVWSSIHHAEWVIQKGGCWKIGNGSQVNVWEDNWIPQHNGFKIYTPGANSSSIRQV 600
Query: 198 KDLLVEGERQWDVAKIINLFSLMDIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCYYL 257
K+LLVE R W + + N F + I +PL LED +W Y + GN+++KS Y
Sbjct: 601 KELLVEDPRGWHQSILENHFLSFESERIQQLPLVQEVLEDSYMWMYSQDGNYTVKSGYNF 660
Query: 258 ALR-----VLGRGDESIEGEGWGSIWKFNVAPKVRDFI 290
+ G + + W + W + P+ +D +
Sbjct: 661 IKEWHYNSLPGPSNNNNNQRIWKASWNLDTIPRHKDLL 698
>IMGA|Medtr5g029030.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
12035165-12036141 H EGN_Mt090430 20090702
Length = 250
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 122/213 (57%)
Query: 84 KKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFKSKYFRDRRLLDAQTGHHPSFV 143
K+ GGMGFR FN+AML KQG +LLT+ +T++ R++K+KY+ + L A+ GH+ S++
Sbjct: 3 KEYGGMGFRHFFGFNLAMLGKQGWKLLTNQDTIVARIYKAKYYPNTYFLGARLGHNQSYI 62
Query: 144 SRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGAFYVEDDSLFIDNTLLVKDLLVE 203
R I + ++++ G RWR+GNG+ I+V DPWL D V + L V DL+
Sbjct: 63 WRSIFALQVLVRGGQRWRIGNGKNIAVWTDPWLREDKNSVVSSTRVQGTENLKVADLMDS 122
Query: 204 GERQWDVAKIINLFSLMDIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCYYLALRVLG 263
W+ I LF+ D I + L+ R+ ED+ IW ++ +G +++KS Y A+ L
Sbjct: 123 NGVTWNWGLIAALFNEQDKAAIAKLALTNREGEDKRIWKFNSQGFYTVKSAYRYAMETLI 182
Query: 264 RGDESIEGEGWGSIWKFNVAPKVRDFIWRTLRN 296
+E W + K + +++ F+WR LR+
Sbjct: 183 DNEEYRVPREWLKMLKMQIPQRIKVFLWRVLRD 215
>IMGA|Medtr4g160830.1 Putative ribonuclease H protein At1g65750,
chr04_pseudomolecule_IMGAG_V3 40910518-40909919 H
EGN_Mt090430 20090702
Length = 199
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 115/196 (58%)
Query: 6 ERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFWWGS 65
+R+WK + W + LS GR +LI++V Q +P Y MS F LP LC+++E+++ SFWWGS
Sbjct: 2 DRIWKKLKGWKEKSLSFEGRGVLIRAVTQVIPTYYMSCFLLPKGLCEKIERVVCSFWWGS 61
Query: 66 KGSEKKLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFKSKY 125
++KK+HW + K DGGM F+ L FN+AMLAKQ R T+ NTL+ + FKSKY
Sbjct: 62 TNTKKKIHWKNKEILFKFKHDGGMVFKSLRDFNIAMLAKQVWRFHTNLNTLIAKCFKSKY 121
Query: 126 FRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGAFYVE 185
+ +L+A G++P++ R I + + G WRVG G I + D W+ + V
Sbjct: 122 YPHTDILEADLGNNPNYAWRSIQNAIWPILKGSCWRVGKGDNIRIWDDNWIPTYHSLRVL 181
Query: 186 DDSLFIDNTLLVKDLL 201
+ + VKDL+
Sbjct: 182 NPKRNNPHINKVKDLI 197
>IMGA|Medtr8g125530.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr08_pseudomolecule_IMGAG_V3
29296065-29298854 H EGN_Mt090430 20090702
Length = 693
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 144/337 (42%), Gaps = 94/337 (27%)
Query: 6 ERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFWWGS 65
+R+W IN WS++ LSKA RE+L+KSV+Q++P+Y MSV+ LP L D +EK++N+FWWG
Sbjct: 313 DRIWHKINCWSSKCLSKAEREVLMKSVLQSIPSYIMSVYLLPNKLVDAIEKIINAFWWGH 372
Query: 66 KGSEKK-LHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFKSK 124
G+ +K LHWL+W R+ K GGMGF+D
Sbjct: 373 GGTTRKGLHWLSWKRLSVHKNYGGMGFKD------------------------------- 401
Query: 125 YFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGAFYV 184
+ SF++ + GVRWR+G G I + WL DG
Sbjct: 402 ----------------------LTSFHVAML-GVRWRIGYGASIPLFGASWLK-DGCSLS 437
Query: 185 EDDSLFID-NTLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDIPLSVRDLEDELIWHY 243
L+ + V+D++ +
Sbjct: 438 TQSPLYASLAHVKVQDIIEPSTKA------------------------------------ 461
Query: 244 DKKGNFSIKSCYYLALRVLGRGDESIEGEGWGSIWKFNVAPKVRDFIWRTLRNLLPTRWG 303
+K G++S++S Y + + + W SIWK PK+R+F+W R PTR
Sbjct: 462 EKNGSYSVRSAYRIYVTKIADNSHLHVPGKWSSIWKLKFPPKIRNFVWPVCRGCFPTRAR 521
Query: 304 LSRRGVNVDTTCPYCDLE-EDINHALLLCTKVLEVWR 339
LS RG++ C ED H LL ++VWR
Sbjct: 522 LSSRGIHCPNDFVLCGTNYEDSIHVLLEYPGAMQVWR 558
>IMGA|Medtr5g088270.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
34195188-34196556 H EGN_Mt090430 20090702
Length = 307
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 93/150 (62%), Gaps = 1/150 (0%)
Query: 41 MSVFELPLCLCDELEKMMNSFWWGSKGSEKK-LHWLAWNRMCGSKKDGGMGFRDLHCFNM 99
MSVF LP L D++EKM+N FWWG+ GS ++ +HWL+ N++ K GGMGF+DL FN+
Sbjct: 1 MSVFLLPTTLVDQIEKMINGFWWGNGGSNRRGIHWLSCNKLRVHKNHGGMGFKDLTAFNL 60
Query: 100 AMLAKQGXRLLTSPNTLLYRVFKSKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVR 159
AML KQG + L+ ++FK++YF L A+ GH+ SFV R I S V + GVR
Sbjct: 61 AMLGKQGWKFQFQSECLVSKLFKARYFPQSDYLGAKLGHNLSFVWRSIYSARRVARSGVR 120
Query: 160 WRVGNGRRISVVKDPWLSIDGAFYVEDDSL 189
W++GN I + PWL+ G E ++
Sbjct: 121 WKIGNSVNIPIFDAPWLADGGCISGEGQTM 150
>IMGA|Medtr5g083870.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
31873812-31875697 H EGN_Mt090430 20090702
Length = 485
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 148/338 (43%), Gaps = 95/338 (28%)
Query: 2 GFLKERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSF 61
++K+R+W+ INSW R LSKAG+E++IK V+Q++P+Y MS++ LP + +++E M+NSF
Sbjct: 40 AYIKDRIWQKINSWRGRALSKAGKEVMIKFVLQSIPSYIMSIYVLPRTVINDIEMMLNSF 99
Query: 62 WWGSKGSEKKLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVF 121
+ G LT+P +L+ ++F
Sbjct: 100 -----------------------------------WWGGGGGNGGWNFLTNPPSLISQIF 124
Query: 122 KSKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGA 181
K++YF LDA+ G +PS+ R+I +L G RW +G+G I V+ DPWL
Sbjct: 125 KARYFPITSFLDAKFGFNPSYAWRIIWMSRQILSRGCRWSIGDGSHIRVMGDPWLC---- 180
Query: 182 FYVEDDSLFIDNTLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDIPLSVRDLEDELIW 241
+ L+K ++W H ++ L ED+++W
Sbjct: 181 ----------SGSQLLKT------KEWA-------------HVVIQTSLFPSVQEDKVVW 211
Query: 242 HYDKKGNFSIKSCYYLALRVLGRGDESIEGEGWGSIWKFNVAPKVRDFIWRTLRNLLPTR 301
+ G +S++S Y++ +R V P R +PTR
Sbjct: 212 QEESNGLYSVRSGYHIVVR--------------------EVVPSTH------YRGCIPTR 245
Query: 302 WGLSRRGVNVDTTCPYCDLEEDIN-HALLLCTKVLEVW 338
L++R V+ C +CD EE+ HA + C E W
Sbjct: 246 VNLNQRHVSCTNICLWCDYEEETYWHAFVECEVARESW 283
>IMGA|Medtr1g117580.1 hypothetical protein
chr01_pseudomolecule_IMGAG_V3 25273871-25275952 H
EGN_Mt090430 20090702
Length = 663
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 102/177 (57%)
Query: 86 DGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFKSKYFRDRRLLDAQTGHHPSFVSR 145
+G M F+ L FN+AML KQG R+LT+P+TL+ +++K++YF L+A GH PSFV R
Sbjct: 476 NGSMSFKSLGTFNLAMLGKQGWRILTNPDTLIAKIYKARYFSRCNFLEATIGHKPSFVWR 535
Query: 146 VIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGAFYVEDDSLFIDNTLLVKDLLVEGE 205
I + +LK G RW++GNG I V + W+ + Y +D L V D ++
Sbjct: 536 SICNSKFILKAGSRWKIGNGTSIPVWNNYWMKDNVTLYPLEDVASTLANLRVSDCILPNH 595
Query: 206 RQWDVAKIINLFSLMDIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCYYLALRVL 262
+ W++ + ++F+ + I++ PL ED LIW + G +S++S Y+L + L
Sbjct: 596 KSWNLPFLHSVFNHQVVEHIINTPLFPSVHEDRLIWKKENNGEYSVRSAYHLCMNEL 652
>IMGA|Medtr4g129960.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr04_pseudomolecule_IMGAG_V3
31059249-31058149 H EGN_Mt090430 20090702
Length = 344
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 105/204 (51%), Gaps = 3/204 (1%)
Query: 152 MVLKHGVRWRVGNGRRISVVKDPWLSIDGAFYVEDDSLFIDNTLLVKDLLVEGERQWDVA 211
MVL G RWR+G+G +I V+ DPWL + ++ L + DL++EG ++WDV
Sbjct: 1 MVLLRGCRWRIGDGTQIRVMHDPWLRNEHGGWLASPQNQDVYDLFLADLMIEGGKEWDVD 60
Query: 212 KIINLFSLMDIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCYYLALR-VLGRGDESIE 270
KI +L S +++L PL +D++IW ++ G +S+K+ Y + R V+ +
Sbjct: 61 KIFDLLSFESANSVLKTPLFPSVQDDQVIWQEEQNGVYSVKTGYRIDARDVVPASQYQVR 120
Query: 271 GEGWGSIWKFNVAPKVRDFIWRTLRNLLPTRWGLSRRGVNVDTTCPYCDLEEDIN-HALL 329
G+ W +WK PK R+ +WR +PTR L R V CP+C LE + + HA +
Sbjct: 121 GD-WNKLWKVCSPPKARNLLWRICPGCIPTRVKLVHRQVPCAYLCPWCGLEAETDWHAFI 179
Query: 330 LCTKVLEVWRVCRVEEAFTNLSFK 353
CT E W + E L F
Sbjct: 180 GCTIAKESWSFAGLSELLHELVFN 203
>IMGA|Medtr3g125040.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
31944726-31943241 H EGN_Mt090430 20090702
Length = 351
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 101/217 (46%), Gaps = 37/217 (17%)
Query: 41 MSVFELPLCLCDELEKMMNSFWWGSKGSEKKLHWLAWNRMCGSKKDGGMGFRDLHCFNMA 100
MS F LP LCD +E+++ SFWWG S +K+HW + + SK GG GF++L FN+
Sbjct: 1 MSCFLLPQGLCDRIERVVCSFWWGGSDSNRKIHWTKNDSLFQSKDSGGFGFKNLRDFNLD 60
Query: 101 MLAKQGXRLLTSPNTLLYRVFKSKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRW 160
MLAKQ R T P++ L+ G W
Sbjct: 61 MLAKQAWRFYTQPHS-------------------------------------NLQKGGCW 83
Query: 161 RVGNGRRISVVKDPWLSIDGAFYVEDDSLFIDNTLLVKDLLVEGERQWDVAKIINLFSLM 220
R+GNG I + +D W+ + F ++ N LVKDL ++ WD I N F +
Sbjct: 84 RIGNGHSIKIWEDNWIPSNNDFKTISPNIGNPNIQLVKDLFLQDGSGWDTDLIKNNFLHI 143
Query: 221 DIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCYYL 257
D I IP+ DE +W +++ G +S+K+ Y +
Sbjct: 144 DRDNITQIPIINTSKNDEYMWMHEQNGVYSVKNGYQI 180
>IMGA|Medtr1g122150.1 contains similarity to reverse trancriptase,
related, putative chr01_pseudomolecule_IMGAG_V3
26788772-26788104 H EGN_Mt090430 20090702
Length = 222
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 106/221 (47%), Gaps = 5/221 (2%)
Query: 101 MLAKQGXRLLTSPNTLLYRVFKSKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRW 160
MLAKQ R T P++L+ R FK+KYF +L A G +PS+ R I + V+ G W
Sbjct: 1 MLAKQVWRFHTKPHSLISRCFKAKYFPQSDILQAPLGCNPSYAWRSIHNSIWVILKGSCW 60
Query: 161 RVGNGRRISVVKDPWLSIDGAFYVEDDSLFIDNTLLVKDLLVEGERQWDVAKIINLFSLM 220
++GNG V D W+ + F + + + VKDL+ WD + NLF +
Sbjct: 61 KIGNGESAKVWGDNWVPLHNGFKILTQKMEPFSIRHVKDLINMDSFSWDTEILNNLFLPI 120
Query: 221 DIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCY-----YLALRVLGRGDESIEGEGWG 275
D I IP+ DE +W ++ G +++KS Y + + S + + W
Sbjct: 121 DKDHIEQIPIINTTNIDEYMWMHEPTGVYTVKSGYKAIKEWQDQQFSSTASSSCDTQVWK 180
Query: 276 SIWKFNVAPKVRDFIWRTLRNLLPTRWGLSRRGVNVDTTCP 316
+W + P+ + +WR L+N LP R LS RGV CP
Sbjct: 181 KLWAIHTIPRHKVLLWRILQNSLPVRSELSNRGVPCSILCP 221
>IMGA|Medtr2g114260.1 hypothetical protein
chr02_pseudomolecule_IMGAG_V3 26977303-26977923 H
EGN_Mt090430 20090702
Length = 178
Score = 113 bits (283), Expect = 2e-25, Method: Composition-based stats.
Identities = 60/168 (35%), Positives = 87/168 (51%), Gaps = 28/168 (16%)
Query: 3 FLKERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFW 62
FLK+R+WK + W + +S GR LI++V QA+P Y MS F LP LC +EK++ FW
Sbjct: 39 FLKDRIWKKLKGWKEKSVSFEGRAFLIRAVAQAIPTYIMSCFLLPKGLCSRIEKVVCFFW 98
Query: 63 WGSKGSEKKLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFK 122
WGS +KK+HW + SK +GGMGF+ L FN+A L KQ
Sbjct: 99 WGSTEHKKKMHWTKREHLFKSKLEGGMGFKILRGFNLAKLTKQ----------------- 141
Query: 123 SKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISV 170
G + +F R I + V++ G WR+GNG+ +++
Sbjct: 142 -----------VNIGSNSNFAWRSIYNAKWVIQKGSCWRIGNGQSVNI 178
>IMGA|Medtr4g084360.1 Putative ribonuclease H protein At1g65750,
chr04_pseudomolecule_IMGAG_V3 17721962-17723166 E
EGN_Mt090430 20090702
Length = 188
Score = 113 bits (282), Expect = 3e-25, Method: Composition-based stats.
Identities = 50/108 (46%), Positives = 72/108 (66%)
Query: 14 SWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFWWGSKGSEKKLH 73
S + LS AGR LIK+V QA+P Y MS F LP C +L++++ FWWGS K+ H
Sbjct: 81 SKRQKHLSFAGRSTLIKAVSQAIPTYIMSGFLLPKNFCQQLDRVICDFWWGSNTDSKRTH 140
Query: 74 WLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVF 121
W+ W ++C +KK+GG+GFR+L FN+A+LAKQ R+ T +L+ +V
Sbjct: 141 WIKWEKLCKAKKNGGLGFRNLRAFNIALLAKQIWRIQTQNQSLMAKVL 188
>IMGA|Medtr8g053420.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr08_pseudomolecule_IMGAG_V3
12119249-12120974 H EGN_Mt090430 20090702
Length = 477
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 138/308 (44%), Gaps = 43/308 (13%)
Query: 3 FLKERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFW 62
FL +++ + SW N+ L+KAGR L KSV+ A+P Y M + P +C++L+KM F
Sbjct: 155 FLIDKVQSCLASWKNKLLNKAGRLTLAKSVLNAIPTYYMQISWTPQSICNQLDKMTRKFI 214
Query: 63 WGSKGSE-KKLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVF 121
W KG++ K +H ++W+++ K GG+G R N A+L K + T+ N ++
Sbjct: 215 W--KGTDGKGVHLVSWDKITRPKSLGGLGVRVARNANTALLGKLVWDIHTNANKSWVQIL 272
Query: 122 KSKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGA 181
+KY + +LD + S ++ VL+ G+ +RVGNG S W ++ G
Sbjct: 273 SNKYLGNYNVLDVPK-KNGSTTWNSMLKARSVLRDGLVFRVGNG-TTSFWYSSWTTL-GT 329
Query: 182 FYVEDDSLFIDNTLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDIPLSVRDL--EDEL 239
F ++ +DIH I L +RDL +D +
Sbjct: 330 F-------------------------------ASMVLWVDIHY---ISLCIRDLIIDDHI 355
Query: 240 IWHYDKKGNFSIKSCYYLALRVLGRGDESIEGEGWGSIWKFNVAPKVRDFIWRTLRNLLP 299
W G ++++S Y+ L D E W IWK K++ W LP
Sbjct: 356 TWANHLDGIYTVRSGYFWLLTTHSE-DHHDEDVSWNWIWKMKAPEKIKFLFWTASHVSLP 414
Query: 300 TRWGLSRR 307
T+ L RR
Sbjct: 415 TKALLHRR 422
>IMGA|Medtr3g024330.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
5982582-5983034 H EGN_Mt090430 20090702
Length = 150
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Query: 28 LIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFWWGSKGSEKK-LHWLAWNRMCGSKKD 86
+IK ++Q++P Y +S+F +P L DE+EK+MN FWW + G+ K + WL+W+++ K+
Sbjct: 1 MIKYILQSIPTYFISIFLIPSSLGDEIEKIMNYFWWENGGNRNKGIRWLSWDKLYVHKRS 60
Query: 87 GGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFKSKYFRDRRLLDAQTGHHPSFVSRV 146
GMGF++L+ FNMA+ KQ RL+ P L+ R+FK++Y+R + +A+ RV
Sbjct: 61 RGMGFKNLYMFNMALHDKQVWRLMCQPELLVARLFKARYYRRNDIFEARKEIIQVMCGRV 120
Query: 147 IM 148
M
Sbjct: 121 FM 122
>IMGA|AC146793_2.1 RNA-directed DNA polymerase, related AC146793.7
10132-10811 E EGN_Mt090430 20090702
Length = 170
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 84/169 (49%), Gaps = 28/169 (16%)
Query: 87 GGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFKSKYFRDRRLLDAQTGHHPSFVSRV 146
GGM F+DL F MAML KQG R T P +L+ R+FK++YF + + + GH+PS+V R
Sbjct: 13 GGMRFKDLTSFIMAMLGKQGWRFQTDPTSLVSRLFKARYFSNSSFIQSSIGHNPSYVYRS 72
Query: 147 IMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGAFYVEDDSLFIDNTLLVKDLLVEGER 206
I S +++KH W VG+G I + PWL D L + T
Sbjct: 73 IFSAKIMVKHDALWPVGSGANIPFLGAPWL---------KDGLSLSTT------------ 111
Query: 207 QWDVAKIINLFSLMDIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCY 255
++F + IL+ PL ED+LIW DK G + ++S Y
Sbjct: 112 -------NSIFEPLFAQRILNTPLQHLVTEDKLIWKGDKSGKYFVRSAY 153
>IMGA|Medtr4g079290.1 RNA-directed DNA polymerase (Reverse
transcriptase); Polynucleotidyl transferase,
Ribonuclease H fold chr04_pseudomolecule_IMGAG_V3
15868030-15871357 E EGN_Mt090430 20090702
Length = 845
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 95/185 (51%), Gaps = 13/185 (7%)
Query: 74 WLAWNRMCGSKKDGGMGF---RDLHCFN------MAMLAKQGXRLLTSPNTLLYRVFKSK 124
+L M G K+ GF R H N ++ + ++G R T + L+ R+FK++
Sbjct: 425 YLGLPSMVGRSKEATFGFIKDRIWHKINSWSSKCLSKVGREGWRFQTESSNLVCRLFKAR 484
Query: 125 YFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGAFYV 184
YF + + ++ GH+PS+V R I S +V+K G RWR+G+G I + PWL DG F
Sbjct: 485 YFPNSDFIGSKIGHNPSYVWRSIFSAKIVVKQGARWRIGSGVNIPFLGAPWLK-DGLFLS 543
Query: 185 EDDSLFIDNTLLVK--DLLVEGERQWDVAKIINLFSLMDIHTILDIPLSVRDLEDELIWH 242
+ +F + + VK D + + + W I +LF IL+ PL LED++IW
Sbjct: 544 TTNPIF-EPLMQVKLCDFIEQDVKMWKAPLIHSLFDAQTAELILNTPLQPLVLEDKMIWK 602
Query: 243 YDKKG 247
+K G
Sbjct: 603 GEKSG 607
>IMGA|Medtr2g095830.1 Lipocalin chr02_pseudomolecule_IMGAG_V3
22005738-22006807 E EGN_Mt090430 20090702
Length = 168
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 95/183 (51%), Gaps = 19/183 (10%)
Query: 152 MVLKHGVRWRVGNGRRISVVKDPWLSIDGAFYVEDDSLFIDNTLLVKDLLVEGERQWDVA 211
++++ G RWR+GNG+ I+V DPWL ED+ V DL+ GE W+
Sbjct: 3 VIVRGGQRWRIGNGKSIAVWTDPWLR-------EDEK--------VADLM-SGE-SWNWG 45
Query: 212 KIINLFSLMDIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCYYLALRVLGRGDE-SIE 270
I +F+ D I ++ L RD ED +IW +++ GN++++S Y A+ L E +
Sbjct: 46 MIAGIFNDHDRKAISNLALLNRDGEDRIIWKFNRYGNYTVRSAYRYAMETLVDNVEYRVS 105
Query: 271 GEGWGSIWKFNVAPKVRDFIWRTLRNLLPTRWGLSRRGVNVDTTCPYCDLEEDINHALLL 330
GE W +W + +++ F+WR +R LPTR L + V CP+C+ + N + +
Sbjct: 106 GE-WLKMWSLKIPQRIKVFLWRAVRGALPTRMRLQDKVVPCTDCCPFCETNYENNWHVFM 164
Query: 331 CTK 333
K
Sbjct: 165 GVK 167
>IMGA|Medtr5g021560.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
8248910-8249829 H EGN_Mt090430 20090702
Length = 241
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 82/151 (54%)
Query: 110 LTSPNTLLYRVFKSKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRIS 169
++ P +L+ RVFKS+YF L + G++P+F R I + +L +G R +GNG+++S
Sbjct: 1 MSKPESLVVRVFKSRYFPHSSYLGPKLGYNPNFAWRSIWNSRQLLLYGCRCTIGNGQQVS 60
Query: 170 VVKDPWLSIDGAFYVEDDSLFIDNTLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDIP 229
V+ DPW+ +++ +L V DL+V+ ER WD+ K+ +LF + ILD P
Sbjct: 61 VMNDPWVRGTREKWIQSPQSQGVRSLRVSDLIVDEERVWDIDKLESLFPDDMVQAILDTP 120
Query: 230 LSVRDLEDELIWHYDKKGNFSIKSCYYLALR 260
L D + W ++ G + +C L R
Sbjct: 121 LFAEVHNDRIAWMKERSGRGCVLTCLRLQSR 151
>IMGA|Medtr3g124260.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 31444078-31442691 H
EGN_Mt090430 20090702
Length = 404
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 76/150 (50%)
Query: 152 MVLKHGVRWRVGNGRRISVVKDPWLSIDGAFYVEDDSLFIDNTLLVKDLLVEGERQWDVA 211
MV++HG RW +G+G IS++ +PW+ + V L+ + + W+
Sbjct: 1 MVVRHGTRWIIGSGYDISMINEPWIGMGLRVPPAAPDDLSYQGYSVGHLIHQDVKTWNEP 60
Query: 212 KIINLFSLMDIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCYYLALRVLGRGDESIEG 271
+I +F IL+ PL ++ ED+L+W +K G +S++S Y + + +
Sbjct: 61 LVICIFEAGTAQQILNTPLFLQVNEDKLVWKPEKNGQYSVRSAYRVCVEEIADMSHLHTN 120
Query: 272 EGWGSIWKFNVAPKVRDFIWRTLRNLLPTR 301
WG IWK V PKV++ +WR R LPTR
Sbjct: 121 GFWGGIWKLKVPPKVKNMLWRVCRECLPTR 150
>IMGA|AC233685_57.1 RNA-directed DNA polymerase (Reverse
transcriptase) AC233685.2 242381-241350 H EGN_Mt090430
20090702
Length = 268
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 2 GFLKERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSF 61
G+L++ +W+ I W + LSKAGRE+LIK V QA+P YCMS F LP L +E++ M+NSF
Sbjct: 155 GYLRDGVWRKIQQWFGKHLSKAGREVLIKFVTQAIPTYCMSTFLLPTTLGEEIQIMINSF 214
Query: 62 WWG-SKGSEKKLHWLAWNRMCGSKKDG 87
WWG ++ K + WL+W+++ K+ G
Sbjct: 215 WWGLNRRQGKGIDWLSWDKLTTRKEYG 241
>IMGA|AC233572_22.1 RNA-directed DNA polymerase (Reverse
transcriptase) AC233572.2 97249-98280 H EGN_Mt090430
20090702
Length = 258
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 2 GFLKERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSF 61
G+L++ +W+ I W + LSKAGRE+LIK V QA+P YCMS F LP L +E++ M+NSF
Sbjct: 145 GYLRDGVWRKIQQWFGKHLSKAGREVLIKFVTQAIPTYCMSTFLLPTTLGEEIQIMINSF 204
Query: 62 WWG-SKGSEKKLHWLAWNRMCGSKKDG 87
WWG ++ K + WL+W+++ K+ G
Sbjct: 205 WWGLNRRQGKGIDWLSWDKLTTRKEYG 231
>IMGA|Medtr4g084370.1 contains similarity to reverse trancriptase,
related, related chr04_pseudomolecule_IMGAG_V3
17724162-17724986 H EGN_Mt090430 20090702
Length = 274
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 120/279 (43%), Gaps = 25/279 (8%)
Query: 120 VFKSKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSID 179
+ K+K+F + + +A S+ R + V++ G W VGNG I++ +D WL
Sbjct: 1 MLKAKHFPNNTIWEAHQKPGISYSWRSFLQARWVIQKGSYWTVGNGNLINIWEDRWLPDQ 60
Query: 180 GAFYVEDDSLFIDNTLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDIPLSVRDLEDEL 239
F V + V DL+ W+ I LF + I IPL + +D+L
Sbjct: 61 NGFKVFSKKPNNCDIQKVSDLIDYTTLSWNTPLIHKLFLPFETDQIHQIPLINTNEDDDL 120
Query: 240 IWHYDKKGNFSIKSCYYLALRVLGRGDESIEGEGWGS----------IWKFNVAPKVRDF 289
+W + G++S+K Y+ + +E +G+ S +W +
Sbjct: 121 VWAHTNNGSYSVKYGYHF----IKNREEQAQGQPGNSSTCCDPISKNLWNQTIPQNKIQL 176
Query: 290 IWRTLRNLLPTRWGLSRRGVNVDTTCPYCDLE-EDINHALLLCTKVLEVWRVCRVEEAFT 348
IWR + N LP + L + G+ D CP C E I+H + C+ V VW + F
Sbjct: 177 IWRIMNNGLPVKRNLMQCGIRCDPLCPGCGNHIESISHTFMQCSWVQRVWFASPLTLNFQ 236
Query: 349 NLS------FKSLYLQVLKQNNNEKLA---FYLLCRMEC 378
NL + L LQ L++ + +KL ++L +EC
Sbjct: 237 NLDPDHPEFIEWLSLQ-LQKGDKKKLGNNLSHMLWNLEC 274
>IMGA|Medtr4g084240.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative chr04_pseudomolecule_IMGAG_V3
17645335-17644567 H EGN_Mt090430 20090702
Length = 185
Score = 91.7 bits (226), Expect = 8e-19, Method: Composition-based stats.
Identities = 73/255 (28%), Positives = 109/255 (42%), Gaps = 72/255 (28%)
Query: 57 MMNSFWWGSKGSEKK-LHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNT 115
M N FWWG G+ + + WL+W ++ K G+GF DL FN+AMLAKQG + T+P +
Sbjct: 1 MKNFFWWGHGGANNRGISWLSWKKLLMHKVHAGVGFIDLPAFNLAMLAKQGWKFQTNPES 60
Query: 116 LLYRVFKSKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPW 175
L L A+ G +PS+V I+ +++++ VRWR
Sbjct: 61 L--------------FLTARLGDNPSYVWDNILQACLIVRNEVRWR-------------- 92
Query: 176 LSIDGAFYVEDDSLFIDNTLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDIPLSVRDL 235
S D A+ V + SL V ++ N
Sbjct: 93 -SKDIAYDVLNTSL--------------------VNQVTN-------------------- 111
Query: 236 EDELIWHYDKKGNFSIKSCYYLALRVLGRGDESIEGEGWGSIWKFNVAPKV-RDFIWRTL 294
D+LIW +K G +S+KS + L + L E W IW+ V PK+ + + L
Sbjct: 112 -DKLIWKAEKNGIYSVKSTFRLCVEDLMDTTHLRCPEFWMGIWRLKVPPKIKKSHVDDML 170
Query: 295 RNLLPTRWGLSRRGV 309
+LPTR L +GV
Sbjct: 171 DEILPTRMQLKDKGV 185
>IMGA|Medtr4g042860.1 contains similarity to reverse trancriptase,
related, related chr04_pseudomolecule_IMGAG_V3
10317892-10316821 H EGN_Mt090430 20090702
Length = 341
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 98/255 (38%), Gaps = 28/255 (10%)
Query: 89 MGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFKSKYFRDRRLLDAQTGHHPSFVSRVIM 148
MG + L FN+AMLAKQG R+ + L KS YF L A G +P F R I+
Sbjct: 1 MGVKTLKDFNLAMLAKQGLRIFHHGESFLTTCLKSHYFPRCNFLQAGIGFNPGFTWRSIV 60
Query: 149 SFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGAFYVEDDSLFIDNTLLVKDLLVEGERQW 208
+ ++D WL + N LV +L+ E +W
Sbjct: 61 Q-------------------ARLEDIWLPHQYGHKLWSPKPSGSNIHLVAELIHEECGRW 101
Query: 209 DVAKIINLFSLMDIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCYYLALR----VLGR 264
+ + F IL IP+ +D IW +K F+ +L R
Sbjct: 102 NAHLVNEFFLPFKAQQILQIPVFPSQQQDCFIWAVNKNDEFT----EFLKERRERLNSNY 157
Query: 265 GDESIEGEGWGSIWKFNVAPKVRDFIWRTLRNLLPTRWGLSRRGVNVDTTCPYCD-LEED 323
S++ W +W+ P+ IW L N LP R L RGV C CD +E
Sbjct: 158 SHSSLQNGVWNKLWRVKTIPRHTHLIWCILHNWLPVRSALFNRGVQCSPLCCLCDQQQES 217
Query: 324 INHALLLCTKVLEVW 338
INH + C VW
Sbjct: 218 INHLFMECGWSKAVW 232
>IMGA|Medtr5g073420.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
26369293-26369057 H EGN_Mt090430 20090702
Length = 78
Score = 89.7 bits (221), Expect = 3e-18, Method: Composition-based stats.
Identities = 40/78 (51%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 28 LIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFWWGSKGSEKK-LHWLAWNRMCGSKKD 86
+IKSV+QA+P+Y MS+F L L D +EKM+N+FWW GS + +HWL+W ++ K+
Sbjct: 1 MIKSVLQAIPSYVMSIFLLLSSLIDAIEKMLNAFWWEHGGSNNRGIHWLSWEKLTLHKQY 60
Query: 87 GGMGFRDLHCFNMAMLAK 104
GGM F+DL FN+AML K
Sbjct: 61 GGMSFKDLTAFNLAMLGK 78
>IMGA|Medtr3g009350.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
1330505-1330813 H EGN_Mt090430 20090702
Length = 102
Score = 89.0 bits (219), Expect = 6e-18, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 51/76 (67%)
Query: 3 FLKERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFW 62
FL++R+WK + W R LS AGR +LIK V +A+P Y MS F LP C++LEK++ + W
Sbjct: 27 FLQDRIWKKLKGWKERNLSFAGRSVLIKVVAEAIPTYIMSGFLLPKSFCNQLEKLICNIW 86
Query: 63 WGSKGSEKKLHWLAWN 78
WGS + K HW+ WN
Sbjct: 87 WGSNTDQGKTHWINWN 102
>IMGA|Medtr2g100330.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
23354620-23355450 H EGN_Mt090430 20090702
Length = 276
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 124/263 (47%), Gaps = 18/263 (6%)
Query: 1 LGFLKERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNS 60
L F +E + + + SW + L+K GR L+KSV+ ++P Y M V LP C+ ++++ +
Sbjct: 9 LNFFEENISQRLASWQHHLLNKVGRMTLVKSVLNSIPYYYMQVAWLPQSTCESIDRLAIN 68
Query: 61 FWWGSKGSEK-KLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYR 119
F W KGS +++ + W ++ KK GG+ R N ++L + RL + ++L +
Sbjct: 69 FLW--KGSSNFRIYLVGWEKITKPKKLGGLEIRKAREANTSLLGRLVWRLHQNCDSLWVK 126
Query: 120 VFKSKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPW-LSI 178
V KYF +LL T S IM L+ G +R+G+ W ++
Sbjct: 127 VLTHKYFHADKLLTV-TRKSGSVTWNAIMKARFTLRDGFDFRLGDDN-----SSFWFVNW 180
Query: 179 DGAFYVEDDSLFIDN---TLLVKDLLVEGERQWDVAKIINLF--SLMDIHTILDIPLSVR 233
G + + L++D L VKD+ V G W+ I S+ D IL I L+ R
Sbjct: 181 SGIGKLTEKVLYVDIHDLNLRVKDVFVNG--AWNFNHIYTTLPASITDSLKILPICLNSR 238
Query: 234 DLEDELIWHYDKKGNFSIKSCYY 256
+ D W + G +S + YY
Sbjct: 239 -VTDGYTWKGNLHGIYSAEDGYY 260
>IMGA|Medtr7g068430.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr07_pseudomolecule_IMGAG_V3
14039604-14037230 H EGN_Mt090430 20090702
Length = 514
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 134/296 (45%), Gaps = 31/296 (10%)
Query: 70 KKLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFKSKY-FRD 128
+K+ W++W +C K+ GG+G RD+ N+++LAK RLL NTL + +Y +
Sbjct: 11 RKISWVSWKVVCPPKEVGGLGVRDVSLVNLSLLAKWKWRLLQGGNTLWKEILVERYGSKV 70
Query: 129 RRLLDAQTGHHPSFVSRVIMSFNMVLK-HGVRW-------RVGNGRRISVVKDPWLSIDG 180
L+ G + SR + K + V W +VGNG K W +
Sbjct: 71 GEFLEEGVGVWQTNASRWWKDLVSLAKGNEVDWFYEDVIRKVGNGATTGFWKTAWRGGE- 129
Query: 181 AFYVEDDSLFIDNTL---LVKDLLVE--GERQWDVAKIINLF----SLMDIHTILDIPLS 231
F ++ LF T ++++ + G +W + LF +L+D +
Sbjct: 130 PFMMKLHRLFSIATFQEATIQEMWISNVGRGRWRFSWRCQLFVWEVNLLDELLGVLEGFE 189
Query: 232 VRDLEDELIWHYDKKGNFSIKSCYYLALRVLGRGDESI---EGEG--WGSIWKFNVAPKV 286
+ ++ED+ W +K F++KS + +++ GRG + EGE + IWK + KV
Sbjct: 190 LGEVEDKWRWKLEKDDIFTVKS---INIKLEGRGLAEVVCPEGERRVFRQIWKTGASSKV 246
Query: 287 RDFIWRTLRNLLPTRWGLSRRGV---NVDTTCPYC-DLEEDINHALLLCTKVLEVW 338
RDF+W+ L + +PTR R V + C +C D E +H L C VW
Sbjct: 247 RDFVWKALLDWIPTRVNFGIRNCLPPGVGSNCVHCMDFSESTSHLFLHCDLARNVW 302
>IMGA|Medtr3g043440.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 11780720-11779218 H
EGN_Mt090430 20090702
Length = 425
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 137/315 (43%), Gaps = 27/315 (8%)
Query: 24 GREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFWWGSKGSEKKLHWLAWNRMCGS 83
GR L+KS+IQ++ +C+SV+ P+ L ++E+ M +F W +++KL ++W+++C
Sbjct: 3 GRVQLVKSLIQSMLLHCISVYSFPVKLTKDIERWMRNFVWSGDVNQRKLVTVSWHKVCLP 62
Query: 84 KKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFKSKYFRDRRLLDAQTGHHPSFV 143
K+GG+G R L N K LL S N +S+ + ++ + S
Sbjct: 63 LKEGGLGIRSLSKINEGANLKLCRELLHS-NYQWAHFLRSRVLKKKKPISYHI--FSSVW 119
Query: 144 SRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGAFYVED---DSLFIDNTLLVKDL 200
S + + VL + W +G+G I+ D W G VE+ D DN +L
Sbjct: 120 SGIKHKYTEVLANS-SWNLGDGANINFWTDSWC---GKPLVEEFSIDPGLHDNLSSTVNL 175
Query: 201 LVEGERQWDVAKII--NLFSLMDIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCYYLA 258
+E + +W + + + N ++ +I + IP+ +D DE++ G K Y
Sbjct: 176 FIE-DAKWKIPQSLLQNFPNIQNIVEKVIIPVIAKD--DEMLSKLSSNGELCFKDAYLFH 232
Query: 259 LRVLGRGDESIEGEGWGS-IWKFNVAPKVRDFIWRTLRNLLPTRWGLSRRGVNVDTTCPY 317
+ W IW + P +WR L N LPT RG P
Sbjct: 233 C-------SHGQNIAWAKIIWNKCIPPSKSMMMWRRLHNKLPTDDIPGSRGCQF----PS 281
Query: 318 CDLEEDINHALLLCT 332
+ + +H + LC+
Sbjct: 282 MNQKRFTSHPIPLCS 296
>IMGA|Medtr7g084960.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr07_pseudomolecule_IMGAG_V3
18459835-18459356 H EGN_Mt090430 20090702
Length = 144
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 84 KKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFKSKYFRDRRLLDAQTGHHPSFV 143
DGGM F++L FN+AML KQG RL+ +P++L+ R++K+KY+ ++ GH PSFV
Sbjct: 3 NSDGGMSFKNLPTFNLAMLGKQGWRLMINPDSLVARLYKAKYYPRCNFFESTLGHKPSFV 62
Query: 144 SRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGAFYVEDDSLFIDNTLLVKDLLVE 203
R I +G ISV + W++ D + F L V D ++
Sbjct: 63 WRSIC---------------DGEDISVWYNKWIANDVTLIPHANGHFPLADLRVSDCMLH 107
Query: 204 GERQWDVAKIINLFSLMDIHTILDIPLSVRDLEDELI 240
++W++ + ++F + I++ PL ED LI
Sbjct: 108 DRKEWNLPFLQSIFDHHVVENIVNTPLYPSVTEDRLI 144
>IMGA|Medtr1g084160.1 Ribonuclease H chr01_pseudomolecule_IMGAG_V3
16870634-16874775 H EGN_Mt090430 20090702
Length = 651
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 112/284 (39%), Gaps = 8/284 (2%)
Query: 61 FWWGSKGSEKKLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRV 120
F WG S + +H +W +C K G+G R N+ + K G L + ++
Sbjct: 38 FIWGDTPSHRHVHLASWASICTPKSYAGLGLRTACDMNLTAMMKVGWSLSHKKDAFWVKI 97
Query: 121 FKSKYFRDRRLLD-AQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSID 179
K+KY ++ QT S + R I + + WRVG G I+ D W+
Sbjct: 98 IKAKYRCGNDIMPRIQTNKAGSNLWRGICRNWEKVTPNLIWRVGQGDNINFWSDMWVPGA 157
Query: 180 GAFYVEDD-SLFIDNTLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDIPLSVRDLE-D 237
G + + ID+ +L W+++ ++NL I I +P + D
Sbjct: 158 GPLSCHTNLPITIDDDMLTVKEFANDAGDWNLSLLVNLLPPWIIEQIRSLPAPHSEASVD 217
Query: 238 ELIWHYDKKGNFSIKSCYYLALRVLGRGDESIEGEGWGSIWKFNVAPKVRDFIWRTLRNL 297
L W G FS Y L + + ++ + IWK+ +++ +W+ R +
Sbjct: 218 SLAWEGSLDGEFSHALAYESILSLTPSNNSNL----YKCIWKWQGPERIKFLLWKVARKI 273
Query: 298 LPTRWGLSRRGVNVDTTCPYCDLE-EDINHALLLCTKVLEVWRV 340
L T + RG+ + C C+ E E I H + C W
Sbjct: 274 LLTNLTRNSRGMAPNDRCSICNSEPESIIHTIRECHLAKATWNT 317
>IMGA|Medtr1g147120.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr01_pseudomolecule_IMGAG_V3
32701852-32701244 H EGN_Mt090430 20090702
Length = 202
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 10/149 (6%)
Query: 221 DIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCYYLALRVLG-RGDESIEGEGWGSIWK 279
D I +PL R D +IW+ G+++IKS Y + + + R + + G+ W IW
Sbjct: 5 DTSDICRLPLHSRTHSDTIIWNASPNGSYTIKSAYKMCVSISDQRSNYHVSGD-WKLIWS 63
Query: 280 FNVAPKVRDFIWRTLRNLLPTRWGLSRRGVNVDTTCPYC--DLEEDINHALLLCTKVLEV 337
VAPK++ F WR LR LPTR L GV+ +TC C DLE+++ H + C +
Sbjct: 64 LCVAPKIKHFCWRLLRGCLPTRSNLQSCGVHCQSTCVVCNRDLEDEM-HMFMHCKFATDC 122
Query: 338 WRVCRVEEAF-----TNLSFKSLYLQVLK 361
W+ + +N SF S+ +L+
Sbjct: 123 WKAANLWSKIASYMTSNGSFSSIMFAILR 151
>IMGA|Medtr5g073410.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
26368918-26367637 H EGN_Mt090430 20090702
Length = 409
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 98/228 (42%), Gaps = 23/228 (10%)
Query: 152 MVLKHGVRWRVGNGRRISVVKDPWLSIDGAFYVEDDSLFIDNTLLVKDLLVEGERQWDVA 211
M+++ G RW++GN I + + PWL G S + + V L+ + W+
Sbjct: 1 MIVRSGARWKIGNNINIPMFEAPWLRNGGVISGVGQSSDVLQNVRVHSLIDQNTNGWNYN 60
Query: 212 KIINLFSLMDIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCYYLALRVLGRGDESIEG 271
+ F + I+ P+ + ED LIW +K G++S+K + GD
Sbjct: 61 MVNYYFDYDTVQEIIRTPIFHQVEEDALIWKAEKNGHYSVKR----QAVGIAFGDSK--- 113
Query: 272 EGWGSIWKFNVAPKVRDFIWRTLRNLLPTRWGLSRRGVNVDTTCPYC-DLEEDINHALLL 330
V KV +F+WR R+ LPT+ L +GVN C C + ED H L
Sbjct: 114 ----------VPLKVNNFLWRVCRDCLPTQARLLDKGVNCTYLCGLCEECYEDTTHVLFD 163
Query: 331 CTKVLEVWRVCRVEEAFTNL-----SFKSLYLQVLKQNNNEKLAFYLL 373
C K VW C + + +++ + + L +LK+ EK + +
Sbjct: 164 CPKARNVWLNCSMVDKVSSVMLNHNTAAEIILALLKELTKEKFEQFAM 211
>IMGA|Medtr5g088710.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
34427458-34427919 H EGN_Mt090430 20090702
Length = 153
Score = 82.8 bits (203), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 3/149 (2%)
Query: 152 MVLKHGVRWRVGNGRRISVVKDPWLSIDGAFYVEDDSLFID-NTLLVKDLLVEGERQWDV 210
M++K G RWR+G+G I ++ PWL DG D+ ++ + + V +++ + W+
Sbjct: 1 MMVKQGARWRIGSGDTIPLLDAPWLK-DGRSLTMDNPMYAPLSHVKVPNIIEPSTKVWNT 59
Query: 211 AKIINLFSLMDIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCYYLALRVLGRGDESIE 270
I N+F+ IL+ PL ED+L W +K GN+S+ S Y + + +
Sbjct: 60 TLISNMFNHNTTQLILNTPLQPLVHEDKLTWKAEKNGNYSVSSAYRICVTEIADKSHLHI 119
Query: 271 GEGWGSIWKFNVAPKVRDFIWRTLRNLLP 299
W K V P +R+F+WR + LLP
Sbjct: 120 PARWNLTRKLKVPPMIRNFVWR-VSGLLP 147
>IMGA|Medtr2g100360.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
23360766-23362551 H EGN_Mt090430 20090702
Length = 379
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 114/240 (47%), Gaps = 17/240 (7%)
Query: 1 LGFLKERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNS 60
L F +E + + + SW + L+K GR L+KSV+ ++P Y M V LP C+ ++++ +
Sbjct: 9 LNFFEENISQRLASWQHHLLNKVGRMTLVKSVLNSIPYYYMQVAWLPQSTCESIDRLAIN 68
Query: 61 FWWGSKGSEK-KLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYR 119
F W KGS +++ + W ++ KK GG+ R N ++L + RL + ++L +
Sbjct: 69 FLW--KGSSNFRIYLVGWEKITKPKKLGGLEIRKAREANTSLLGRLVWRLHQNCDSLWVK 126
Query: 120 VFKSKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPW-LSI 178
V KYF +LL T S IM L+ G +R+G+ W ++
Sbjct: 127 VLTHKYFHADKLLTV-TRKSGSVTWNAIMKARFTLRDGFDFRLGDDN-----SSFWFVNW 180
Query: 179 DGAFYVEDDSLFIDN---TLLVKDLLVEGERQWDVAKIINLF--SLMDIHTILDIPLSVR 233
G + + L++D L VKD+ V G W+ I S+ D IL I L+ R
Sbjct: 181 SGIGKLTEKVLYVDIHDLNLRVKDVFVNG--AWNFNHIYTTLPASITDSLKILPICLNSR 238
>IMGA|Medtr4g140270.1 RNA-directed DNA polymerase ; Ribonuclease H,
putative chr04_pseudomolecule_IMGAG_V3 34349081-34347530
H EGN_Mt090430 20090702
Length = 346
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 114/240 (47%), Gaps = 17/240 (7%)
Query: 1 LGFLKERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNS 60
L F +E + + + SW + L+K GR L+KSV+ ++P Y M V LP C+ ++++ +
Sbjct: 9 LNFFEENISQRLASWQHHLLNKVGRMTLVKSVLNSIPYYYMQVAWLPQSTCESIDRLAIN 68
Query: 61 FWWGSKGSEK-KLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYR 119
F W KGS +++ + W ++ KK GG+ R N ++L + RL + ++L +
Sbjct: 69 FLW--KGSSNFRIYLVGWEKITKPKKLGGLEIRKAREANTSLLGRLVWRLHQNCDSLWVK 126
Query: 120 VFKSKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPW-LSI 178
V KYF +LL T S IM L+ G +R+G+ W ++
Sbjct: 127 VLTHKYFHADKLLTV-TRKSGSVTWNAIMKARFTLRDGFDFRLGDDN-----SSFWFVNW 180
Query: 179 DGAFYVEDDSLFIDN---TLLVKDLLVEGERQWDVAKIINLF--SLMDIHTILDIPLSVR 233
G + + L++D L VKD+ V G W+ I S+ D IL I L+ R
Sbjct: 181 SGIGKLTEKVLYVDIHDLNLRVKDVFVNG--AWNFNHIYTTLPASITDSLKILPICLNSR 238
>IMGA|Medtr2g100610.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
23480965-23481815 H EGN_Mt090430 20090702
Length = 251
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 114/240 (47%), Gaps = 17/240 (7%)
Query: 1 LGFLKERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNS 60
L F +E + + + SW + L+K GR L+KSV+ ++P Y M V LP C+ ++++ +
Sbjct: 9 LNFFEENISQRLASWQHHLLNKVGRMTLVKSVLNSIPYYYMQVAWLPQSTCESIDRLAIN 68
Query: 61 FWWGSKGSEK-KLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYR 119
F W KGS +++ + W ++ KK GG+ R N ++L + RL + ++L +
Sbjct: 69 FLW--KGSSNFRIYLVGWEKITKPKKLGGLEIRKAREANTSLLGRLVWRLHQNCDSLWVK 126
Query: 120 VFKSKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPW-LSI 178
V KYF +LL T S IM L+ G +R+G+ W ++
Sbjct: 127 VLTHKYFHADKLLTV-TRKSGSVTWNAIMKARFTLRDGFDFRLGDDN-----SSFWFVNW 180
Query: 179 DGAFYVEDDSLFIDN---TLLVKDLLVEGERQWDVAKIINLF--SLMDIHTILDIPLSVR 233
G + + L++D L VKD+ V G W+ I S+ D IL I L+ R
Sbjct: 181 SGIGKLTEKVLYVDIHDLNLRVKDVFVNG--AWNFNHIYTTLPASITDSLKILPICLNSR 238
>IMGA|Medtr2g100590.1 Ribonuclease H chr02_pseudomolecule_IMGAG_V3
23474829-23476616 H EGN_Mt090430 20090702
Length = 477
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 114/240 (47%), Gaps = 17/240 (7%)
Query: 1 LGFLKERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNS 60
L F +E + + + SW + L+K GR L+KSV+ ++P Y M V LP C+ ++++ +
Sbjct: 9 LNFFEENISQRLASWQHHLLNKVGRMTLVKSVLNSIPYYYMQVAWLPQSTCESIDRLAIN 68
Query: 61 FWWGSKGSEK-KLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYR 119
F W KGS +++ + W ++ KK GG+ R N ++L + RL + ++L +
Sbjct: 69 FLW--KGSSNFRIYLVGWEKITKPKKLGGLEIRKAREANTSLLGRLVWRLHQNCDSLWVK 126
Query: 120 VFKSKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPW-LSI 178
V KYF +LL T S IM L+ G +R+G+ W ++
Sbjct: 127 VLTHKYFHADKLLTV-TRKSGSVTWNAIMKARFTLRDGFDFRLGDDN-----SSFWFVNW 180
Query: 179 DGAFYVEDDSLFIDN---TLLVKDLLVEGERQWDVAKIINLF--SLMDIHTILDIPLSVR 233
G + + L++D L VKD+ V G W+ I S+ D IL I L+ R
Sbjct: 181 SGIGKLTEKVLYVDIHDLNLRVKDVFVNG--AWNFNHIYTTLPASITDSLKILPICLNSR 238
>IMGA|Medtr3g103220.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
25344775-25343668 H EGN_Mt090430 20090702
Length = 206
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 30/139 (21%)
Query: 39 YCMSVFELPLCLCDELEKMMNSFWWG-SKGSEKKLHWLAWNRMCGSKKDGGMGFRDLHCF 97
YCMSVF LP + +E+E +M SF+WG K + ++ L W+ M K GG+ FRDL +
Sbjct: 34 YCMSVFLLPTTIREEIEHVMKSFYWGLKKNGGRSINRLKWDNMTPCKDHGGLKFRDLEGY 93
Query: 98 NMAMLAKQGXRLLTSPNTLLYRVFKSKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHG 157
N+AML KQ +LLT +LL + +KY + K+
Sbjct: 94 NLAMLVKQKLKLLTKFPSLLTKAPNAKY---------------------------IFKN- 125
Query: 158 VRWRVGNGRRISVVKDPWL 176
RWR+G+G I+V PW+
Sbjct: 126 -RWRIGDGNNINVWTYPWI 143
>IMGA|Medtr1g122160.1 contains similarity to reverse trancriptase,
related, putative chr01_pseudomolecule_IMGAG_V3
26789109-26788828 H EGN_Mt090430 20090702
Length = 93
Score = 81.6 bits (200), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 53/78 (67%)
Query: 3 FLKERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFW 62
F+ +++WK + W + LS GR +LI++V QA+P Y MS F LP LC ++EK + SFW
Sbjct: 15 FIMDKIWKKLKGWKEKCLSFEGRGVLIRAVAQAIPTYYMSCFLLPKGLCTKIEKAVCSFW 74
Query: 63 WGSKGSEKKLHWLAWNRM 80
WG+ G ++K+HW +++
Sbjct: 75 WGTAGDKRKIHWTKKDKL 92
>IMGA|Medtr7g068050.1 hypothetical protein
chr07_pseudomolecule_IMGAG_V3 13863114-13862631 H
EGN_Mt090430 20090702
Length = 114
Score = 80.1 bits (196), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 67/114 (58%), Gaps = 15/114 (13%)
Query: 64 GSKGSEKK-LHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFK 122
G+ G+ K + WL+W+++ K++GGMGF++L+ FNMA+L Q RL++ P ++
Sbjct: 5 GNGGNRNKGIRWLSWDKLFVHKRNGGMGFKNLYLFNMALLGNQVWRLMSQPENAIF---- 60
Query: 123 SKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWL 176
+A G++ S+V + I ++K G RW++GNG +I V +D WL
Sbjct: 61 ----------EANKGNNLSYVWKSIHEAIPMVKQGTRWKIGNGDKIRVFQDRWL 104
>IMGA|Medtr1g010300.1 RNA-directed DNA polymerase (Reverse
transcriptase); Ribonuclease H
chr01_pseudomolecule_IMGAG_V3 1684225-1680716 E
EGN_Mt090430 20090702
Length = 659
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 4/161 (2%)
Query: 3 FLKERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFW 62
F+ +++ + W LS+ GR L KSV+ A+P Y M LP +C+ ++ + SF
Sbjct: 161 FILDKINGRLAGWKMNLLSRPGRITLAKSVVTAMPIYTMQNLWLPSGICENIDATVRSFI 220
Query: 63 WGSKGSEKKLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFK 122
WG + HW+ W + K GG+G R N+++L K +L P L ++ +
Sbjct: 221 WG----KNYCHWVNWKNLTMPKSCGGLGIRTARNSNISLLGKHIWDILHQPEKLWVQMLR 276
Query: 123 SKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVG 163
KY + ++ S + R I+ +L G RVG
Sbjct: 277 HKYLSNTHIMHTPFKLGDSCIWRAIVKAVEILGPGFVCRVG 317
>IMGA|Medtr2g055540.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
14903666-14903472 H EGN_Mt090430 20090702
Length = 64
Score = 75.1 bits (183), Expect = 8e-14, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 28 LIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFWWGSKGSEKK-LHWLAWNRMCGSKKD 86
+IKSV+Q++P Y MS+F +P + DE+EK+MNSFWW + G+ K + WL+W+++ K+D
Sbjct: 1 MIKSVLQSIPTYFMSIFLIPSSIGDEIEKIMNSFWWENGGNRNKGIKWLSWDKLSVHKRD 60
Query: 87 GGM 89
GGM
Sbjct: 61 GGM 63
>IMGA|Medtr1g089830.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr01_pseudomolecule_IMGAG_V3
18011505-18012272 H EGN_Mt090430 20090702
Length = 179
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 7/109 (6%)
Query: 235 LEDELIWHYDKKGNFSIKSCYYLALRVLGRGDE---SIEGEGWGSIWKFNVAPKVRDFIW 291
+ + LIW+ +K GN+S++S Y + + + S++G WK V PKV++F+W
Sbjct: 38 IRNMLIWNTEKNGNYSVRSAYRICVTKIADNTHLHVSVDG---NLSWKLKVPPKVKNFVW 94
Query: 292 RTLRNLLPTRWGLSRRGVNVDTTCPYCDLE-EDINHALLLCTKVLEVWR 339
R R PTR LS GV C CD ED H L+ C KV++VWR
Sbjct: 95 RVRRGCFPTRARLSSGGVAYPIDCVTCDSNYEDSIHVLVECPKVVQVWR 143
>IMGA|Medtr5g090160.1 Haem peroxidase, plant/fungal/bacterial
chr05_pseudomolecule_IMGAG_V3 35125187-35123779 E
EGN_Mt090430 20090702
Length = 360
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 6/149 (4%)
Query: 196 LVKDLLVEGERQWDVAKIINLFSLMDIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCY 255
+VKDLL+ W+ I + F + I +PL+ ++ +D L+W + + G +S+K+ Y
Sbjct: 1 MVKDLLIGSPPDWNKKLIEDTFIPFEGIQIQQLPLTDKENQDSLMWMFSETGVYSVKTGY 60
Query: 256 -----YLALRVLGRGDESIEGEGWGSIWKFNVAPKVRDFIWRTLRNLLPTRWGLSRRGVN 310
+ R G E I W +W P+ + IW+ + LP R L RG+
Sbjct: 61 QAIQCWKNNRDQGPSSEEIMKTVWKKVWGLQTIPRHKVLIWKIINRALPVRSELINRGIR 120
Query: 311 VDTTCPYCDLE-EDINHALLLCTKVLEVW 338
CP CD E INH L C W
Sbjct: 121 CSLLCPRCDSTIETINHLFLNCEHTRREW 149
>IMGA|Medtr7g021160.1 Ribonuclease H chr07_pseudomolecule_IMGAG_V3
5113686-5112454 H EGN_Mt090430 20090702
Length = 410
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 217 FSLMDIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCYYLALRVLGRGDE-------SI 269
F +D + I IP+ +DEL+W Y+ G +S+KS Y A+R + S
Sbjct: 6 FISLDQNHIEQIPIINTTNQDELMWMYELNGIYSVKSGYQ-AIRSWQIQQKHNTTPNCSS 64
Query: 270 EGEGWGSIWKFNVAPKVRDFIWRTLRNLLPTRWGLSRRGVNVDTTCPYCDLE-EDINHAL 328
E W +WK + P+ + +WR L N LP R L++RG++ CP C+ + E I H
Sbjct: 65 ETTVWKKLWKLHTIPRHKVILWRILHNSLPVRSELNKRGIHCSILCPRCNSKMETITHTF 124
Query: 329 LLCTKVLEVW 338
+ C +L W
Sbjct: 125 MTCPNILRTW 134
>IMGA|Medtr4g107070.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative chr04_pseudomolecule_IMGAG_V3
23293240-23293037 H EGN_Mt090430 20090702
Length = 67
Score = 73.6 bits (179), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/67 (49%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 41 MSVFELPLCLCDELEKMMNSFWWG-SKGSEKKLHWLAWNRMCGSKKDGGMGFRDLHCFNM 99
MS+F LP L D EKM+N FW+G + +HW++W+++ K GGMGF+DL FN+
Sbjct: 1 MSIFILPTSLIDATEKMLNGFWYGHGRLLNMGMHWMSWDKLTIHKNHGGMGFKDLKYFNI 60
Query: 100 AMLAKQG 106
AML KQG
Sbjct: 61 AMLRKQG 67
>IMGA|Medtr3g021630.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
5450314-5449526 H EGN_Mt090430 20090702
Length = 117
Score = 71.6 bits (174), Expect = 9e-13, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 236 EDELIWHYDKKGNFSIKSCYYLALRVLGRGDESIEGEGWGSIWKFNVAPKVRDFIWRTLR 295
ED+LIW +K G +S+K+ Y L + + E WGSIWK V PKV++ +WR R
Sbjct: 9 EDQLIWRLEKNGQYSVKTAYRLCMENIADNSHLYRIENWGSIWKLKVPPKVKNLLWRICR 68
Query: 296 NLLPTRWGLSRRGVNV 311
+ LPT+ L +GV V
Sbjct: 69 DCLPTQARLLDKGVTV 84
>IMGA|Medtr4g070130.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr04_pseudomolecule_IMGAG_V3
13557404-13554904 H EGN_Mt090430 20090702
Length = 447
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%)
Query: 116 LLYRVFKSKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPW 175
L + + +S YF L ++ G + FV R I S MV+K G RWR+G+G I ++ PW
Sbjct: 243 LTFMIGQSAYFPHGDFLSSRLGANLGFVLRSIFSAKMVVKQGARWRIGSGATIPLLSTPW 302
Query: 176 LSIDGAFYVEDDSLFIDNTLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDIPLSVRDL 235
L + + +++ + + V+D+ + W+ I NLF IL+ L
Sbjct: 303 LKDECSLTMDNPMYVPLSHVKVQDITEPSTKVWNTTVISNLFDHNTTQLILNTHLQPLVH 362
Query: 236 EDELIWHYDKKG 247
ED+LIW +K G
Sbjct: 363 EDKLIWKVEKNG 374
>IMGA|Medtr4g069720.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr04_pseudomolecule_IMGAG_V3
13373662-13371162 H EGN_Mt090430 20090702
Length = 447
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%)
Query: 116 LLYRVFKSKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPW 175
L + + +S YF L ++ G + FV R I S MV+K G RWR+G+G I ++ PW
Sbjct: 243 LTFMIGQSAYFPHGDFLSSRLGANLGFVLRSIFSAKMVVKQGARWRIGSGATIPLLSTPW 302
Query: 176 LSIDGAFYVEDDSLFIDNTLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDIPLSVRDL 235
L + + +++ + + V+D+ + W+ I NLF IL+ L
Sbjct: 303 LKDECSLTMDNPMYVPLSHVKVQDITEPSTKVWNTTVISNLFDHNTTQLILNTHLQPLVH 362
Query: 236 EDELIWHYDKKG 247
ED+LIW +K G
Sbjct: 363 EDKLIWKVEKNG 374
>IMGA|AC233662_12.1 Lipocalin AC233662.1 48072-47128 H EGN_Mt090430
20090702
Length = 275
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Query: 224 TILDIPLSVRDLEDELIWHYDKKGNFSIKSCYYLALRVLGRGDE-SIEGEGWGSIWKFNV 282
I ++ L RD +D LIW +++ ++++S Y A++ L E I GE W +W +
Sbjct: 21 AISNLALLNRDGKDRLIWKFNRHEIYTVRSAYRYAMKTLVDNVEYRILGE-WLKMWSLKI 79
Query: 283 APKVRDFIWRTLRNLLPTRWGLSRRGVNVDTTCPYCDLE-EDINHALLLCTKVLEVWRV 340
+V+ F+WR +R + PTR + +GV CP+C+ E+ H + C +V +WR
Sbjct: 80 PQRVKVFLWRAVRGVFPTRMRMQDKGVPCTDCCPFCETNYENDWHVFMGCEEVKTIWRT 138
>IMGA|AC233657_3.1 Lipocalin AC233657.1 16055-16999 H EGN_Mt090430
20090702
Length = 275
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Query: 224 TILDIPLSVRDLEDELIWHYDKKGNFSIKSCYYLALRVLGRGDE-SIEGEGWGSIWKFNV 282
I ++ L RD +D LIW +++ ++++S Y A++ L E I GE W +W +
Sbjct: 21 AISNLALLNRDGKDRLIWKFNRHEIYTVRSAYRYAMKTLVDNVEYRILGE-WLKMWSLKI 79
Query: 283 APKVRDFIWRTLRNLLPTRWGLSRRGVNVDTTCPYCDLE-EDINHALLLCTKVLEVWRV 340
+V+ F+WR +R + PTR + +GV CP+C+ E+ H + C +V +WR
Sbjct: 80 PQRVKVFLWRAVRGVFPTRMRMQDKGVPCTDCCPFCETNYENDWHVFMGCEEVKTIWRT 138
>IMGA|Medtr3g030620.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
8345624-8344229 H EGN_Mt090430 20090702
Length = 222
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 16/101 (15%)
Query: 27 ILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFW-WGSKGSEKKLHWLAWNRMCGSKK 85
+L K +Q + + MS+F LP+ CDE+E+MMNSFW S G + ++W++W+++ K
Sbjct: 1 MLNKYALQFILTHFMSLFTLPVSHCDEIERMMNSFWRCHSGGQSRGINWISWDKLSMHKN 60
Query: 86 DGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFKSKYF 126
DGG KQ RL+T+P +L+ R +K +Y+
Sbjct: 61 DGG---------------KQSWRLMTNPISLVARTYKERYY 86
>IMGA|Medtr4g157980.1 contains similarity to reverse trancriptase,
related, related chr04_pseudomolecule_IMGAG_V3
39513788-39514207 H EGN_Mt090430 20090702
Length = 139
Score = 70.1 bits (170), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Query: 201 LVEGERQWDVAKIINLFSLMDIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCY-YLAL 259
+V+ +++W+ + N + I +PL D+ED +W Y K +S+KS Y ++
Sbjct: 1 MVDHQQEWNQTILENNLLSFEKDHINQLPLIKEDIEDIFMWMYTKDNIYSVKSGYNFIRE 60
Query: 260 RVLGRGDESIEGEGWGSIWKFNVAPKVRDFIWRTLRNLLPTRWGLSRRGVNVDTTCPYCD 319
RG + +IW N P+ +DF+ R L + +P R+ L +G+ D CP C
Sbjct: 61 WYQNRGQRTSNNTANQTIWNLNTIPRHKDFLGRILNDPVPVRYALHLKGLLNDMLCPRCV 120
Query: 320 LE-EDINHALLLC 331
+ E +NH ++ C
Sbjct: 121 TKMETLNHVIMEC 133
>IMGA|Medtr8g128940.1 RNA-directed DNA polymerase, related
chr08_pseudomolecule_IMGAG_V3 30299266-30298795 H
EGN_Mt090430 20090702
Length = 120
Score = 68.9 bits (167), Expect = 7e-12, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 4/102 (3%)
Query: 213 IINLFSLMDIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCYYLALRVLGRGD---ESI 269
I +FS + + IL+IPLS R D+ +WH+++ GNFS++S ++L V R S
Sbjct: 18 IKEIFSEFEANQILNIPLSWRLPSDKRVWHWERNGNFSVRSAHHLIKDVDARNTLEASST 77
Query: 270 EG-EGWGSIWKFNVAPKVRDFIWRTLRNLLPTRWGLSRRGVN 310
G E W ++W+ V++F+ R R++LP R L R+G++
Sbjct: 78 NGQEIWKAVWRIKAPHSVKNFLRRLTRDILPARCRLKRKGLS 119
>IMGA|Medtr8g133770.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 31993480-31994567 H
EGN_Mt090430 20090702
Length = 318
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 222 IHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCYYLALRVLGRGDE-SIEGEGWGSIWKF 280
+ ILD PL D + W ++ G +++K+ Y LA+ L D+ +EGE IWK
Sbjct: 24 VQAILDRPLFAEVHNDRIAWMMERSGRYTVKTDYKLAMMELLHTDQFHVEGEC-HRIWKV 82
Query: 281 NVAPKVRDFIWRTLRNLLPTRWGLSRRGVNVDTTCPYCDLE-EDINHALLLCTKVLEVW 338
N K + +WR R + R L R V + CP+CD ED HA + CT V E W
Sbjct: 83 NSPHKAHNLLWRICRGCVLMRLRLQSRHVLCEVLCPWCDTTVEDDWHAFVGCTVVRESW 141
>IMGA|Medtr8g093640.1 Polynucleotidyl transferase, Ribonuclease H
fold chr08_pseudomolecule_IMGAG_V3 20655028-20657384 H
EGN_Mt090430 20090702
Length = 376
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 251 IKSCYYLALRVLGRGDESIEGEGWGSIWKFNVAPKVRDFIWRTLRNLLPTRWGLSRRGVN 310
+KS Y L + L W SIWK V PKVR+ IWR R L TR L +GV
Sbjct: 30 VKSAYRLCVEELIDASHLRRPGNWSSIWKLKVPPKVRNLIWRICRLCLSTRIRLHDKGVQ 89
Query: 311 VDTTCPYCDLE-EDINHALLLCTKVLEVWRV 340
T C C+ ED+ H C+ ++VWR+
Sbjct: 90 CPTQCVSCESSHEDMAHLFFACSFAIQVWRL 120
>IMGA|Medtr6g024980.1 Putative ribonuclease H protein At1g65750,
chr06_pseudomolecule_IMGAG_V3 5466766-5467589 H
EGN_Mt090430 20090702
Length = 259
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 97/224 (43%), Gaps = 19/224 (8%)
Query: 6 ERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFWWGS 65
+++ K + +W L+KAGR L+KSV A+P E PL G
Sbjct: 45 DKVLKRLATWKGNILNKAGRACLVKSVTTAIPVR-YDGKEFPL---------------GG 88
Query: 66 KGSEKKLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFKSKY 125
G + + + WN + K+ GG+G R+ ++A+L+K +L + + L +V KY
Sbjct: 89 DGLSRTWNHVNWNMVTTPKRFGGLGIREARLTDLALLSKLVWNMLHNKDKLWVKVLSHKY 148
Query: 126 FRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGAFYVE 185
+ L + + PS R I+ G +RVG+G S+ + W + +
Sbjct: 149 LYNTSLWMNKKHNKPSITCRGILHAITSFAPGYNFRVGSGDS-SIWNNDWTQLGPLCQLV 207
Query: 186 DDSLFIDNTLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDIP 229
D+ + +KD+ G +W++ + + +H I +P
Sbjct: 208 PFVNISDSVMCLKDVWENG--KWNLQGLATMIPTDIVHYIHQLP 249
>IMGA|Medtr5g084580.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
32212318-32210868 H EGN_Mt090430 20090702
Length = 201
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 53/102 (51%)
Query: 14 SWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFWWGSKGSEKKLH 73
SW LS AGR L KSVI+A+P Y M +P + +K+ +F WG +K +H
Sbjct: 32 SWKASHLSFAGRVNLAKSVIEAVPTYPMMSCAIPKACLQDSQKVQKAFIWGDNDFQKHVH 91
Query: 74 WLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNT 115
+ W+ M K+ GG+G R L N A L K G +L N+
Sbjct: 92 AVNWSTMTKPKRCGGLGIRRLEEMNEACLLKLGWKLRRGKNS 133
>IMGA|Medtr5g040610.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
17349249-17348078 H EGN_Mt090430 20090702
Length = 340
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 274 WGSIWKFNVAPKVRDFIWRTLRNLLPTRWGLSRRGVNVDTTCPYCDLE-EDINHALLLCT 332
W +W P+ ++F+WR + N LP R L +RG+ CP+C+ + EDINHA + C+
Sbjct: 35 WKKLWALKTIPRHKNFLWRVINNSLPLRSELGKRGIQCSPLCPHCNSKIEDINHAFMTCS 94
Query: 333 KVLEVW 338
+ VW
Sbjct: 95 YITRVW 100
>IMGA|AC235675_13.1 RNA-directed DNA polymerase (reverse
transcriptase), related AC235675.1 34455-34255 H
EGN_Mt090430 20090702
Length = 66
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 2/64 (3%)
Query: 58 MNSFWWGSKGS-EKKLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTL 116
MNSFWWG+ G K++ WL+W+++ K++GGMGF+DL+ N+A+L KQ RL+T+PN L
Sbjct: 1 MNSFWWGNGGGLNKEIKWLSWSKL-DLKENGGMGFKDLYMSNLALLGKQVWRLVTNPNFL 59
Query: 117 LYRV 120
+ R+
Sbjct: 60 VARL 63
>IMGA|AC225507_9.1 Polynucleotidyl transferase, Ribonuclease H fold
AC225507.11 35556-36938 E EGN_Mt090430 20090702
Length = 358
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 240 IWHYDKKGNFSIKSCYYLALRV------LGRGDESIEGEGWGSIWKFNVAPKVRDFIWRT 293
+W Y GN+++KS Y AL+ G S W +W + P+ + +WR
Sbjct: 1 MWMYSNNGNYTVKSGYE-ALQSWKNNSNPGPSTSSQNNNIWKKLWALHTIPRHKMIVWRI 59
Query: 294 LRNLLPTRWGLSRRGVNVDTTCPYCDLE-EDINHALLLCTKVLEVW 338
L N LP R L++RGVN CP C E NH + C + VW
Sbjct: 60 LHNTLPVRTELNKRGVNCPPLCPRCYSNLETTNHIFMSCERTQRVW 105
>IMGA|Medtr4g032720.1 RNA-directed DNA polymerase, related
chr04_pseudomolecule_IMGAG_V3 7955036-7954024 H
EGN_Mt090430 20090702
Length = 320
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 126/317 (39%), Gaps = 40/317 (12%)
Query: 81 CGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFKSKYFRDRRLLDAQTGHHP 140
C GG+ + N A+L TL + +S+YF+ L +
Sbjct: 6 CRPWDAGGLDLKPTRAINDALLLHL---------TLPFFWPRSRYFKSSIWLGVKD---- 52
Query: 141 SFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWL-SIDGAFYVEDDSLFIDNTLLVKD 199
F+MV RW +GNG I + D W+ S LF +L
Sbjct: 53 --------KFSMV-SANTRWIIGNGDNIRLWFDNWMGSPLVTILALPPHLF--PSLKATL 101
Query: 200 LLVEGERQWDVAKIINLFSLMDIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCYYLAL 259
V + +W++ +II F L+ IL + L V L D+ +W + G S K LA
Sbjct: 102 AFVINDGKWNIPRIILDFPLVAAQ-ILQVTLPVSPLPDKCVWLHSHDGELSSK----LAF 156
Query: 260 RVLGRGDESIEGEGWGSIWKFNVAPKVRDFI-WRTLRNLLPTRWGLSRRGVNVDTTCPYC 318
+ L +++ W ++ + P FI WR + + LPT L RG + + CP C
Sbjct: 157 QFLNPAPPNLD---WAAVIRRPCIPPSHSFIFWRFMLSKLPTDENLQLRGCTLVSMCPLC 213
Query: 319 -DLEEDINHALLLC--TKVLEVWRVCRVEEAFTNLSFKSLYLQVLKQNNNEKLAFYLLCR 375
+ E H L C +K + W +++ + S SL L + Q + +L L+
Sbjct: 214 YNQAESSTHLFLECAFSKTIWNWLGIKLQRSIPLASPSSL-LSFIPQRCSSQLRDVLVAA 272
Query: 376 MECVGCSEQISLATNGL 392
+ V I LA N +
Sbjct: 273 I--VHSVHAIWLARNAV 287
>IMGA|Medtr6g015400.1 probable reverse transcriptase At2g02650 -,
related, related chr06_pseudomolecule_IMGAG_V3
3835970-3836323 H EGN_Mt090430 20090702
Length = 117
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Query: 231 SVRDLEDELIWHYDKKGNFSIKSCYYLALRVLGRGDESIEGEGWGSIWKFNVAPKVRDFI 290
S+++ +D+L+ +++ KG +++K Y + L ++ W +WK V+ + F+
Sbjct: 3 SLQENDDKLVSNFNNKGRYTVKPTYKYDMETLVNNEQYRISVDWMRMWKIRVSQSRKVFL 62
Query: 291 WRTLRNLLPTRWGLSRRGVNVDTTCPYCDL--EEDINHALLLCTK 333
WR LR + PT L RG+ CP+C+ E D N LL+ +
Sbjct: 63 WRELRGVFPTHVSLQVRGIPCSDICPHCETNYENDYNTCLLVVKR 107
>IMGA|Medtr8g026870.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative chr08_pseudomolecule_IMGAG_V3
5935308-5934228 H EGN_Mt090430 20090702
Length = 292
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 171 VKDPWL-SIDGAFYVEDDSLFIDNTLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDIP 229
+ D W+ + G++ S + N L V DL+ + ER WD+ KI +LF+ + ILD P
Sbjct: 1 MNDSWIRGVHGSWIQSPQSHDVHN-LHVSDLIADEERVWDIDKIESLFTDDMVQAILDTP 59
Query: 230 LSVRDLEDELIWHYDKKGNFSIKSCYYLALRVLGRGDE-SIEGEGWGSIWKFNVAPKVRD 288
L D + W ++ G +++K+ Y L + L D +EGE W IW N K R+
Sbjct: 60 LFSEVQNDRITWMMERNGRYTVKTDYKLTMMKLLHNDRFHVEGE-WHRIWNVNSPHKARN 118
Query: 289 F 289
Sbjct: 119 M 119
>IMGA|Medtr3g024790.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
6317912-6319402 H EGN_Mt090430 20090702
Length = 456
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 117/341 (34%), Gaps = 62/341 (18%)
Query: 4 LKERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFWW 63
+ +++ + SW LS AGR L+KSV+Q +
Sbjct: 153 IADKIKLKLASWKAYLLSIAGRVQLVKSVVQGM--------------------------- 185
Query: 64 GSKGSEKKLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFKS 123
R+C + +G + L C + A K +L S T +
Sbjct: 186 -------------MKRVCADLDERRLGTKSLICLSEATNLKLCWDVLHSNETW------A 226
Query: 124 KYFRDRRLLDAQTGHH---PSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDG 180
R R L HH S S + FN + K W V NG I D W
Sbjct: 227 VIIRSRTLRGTYCIHHHIYSSIRSGIKQEFNTI-KENTSWLVENGDNIQFWLDSWCRKPL 285
Query: 181 AFYVEDDSLFIDNTLLVKDLLVEGERQWDVAKIINLFSLMDIHTIL-DIPLSVRDLEDEL 239
+ I N ++ QWD + L ++ D+ ++ + + V+ EDEL
Sbjct: 286 IQALNLSLNQIQNLPQCISSYIQNN-QWDTPNEL-LHAMPDLRRLVTQVTIPVQQKEDEL 343
Query: 240 IWHYDKKGNFSIKSCYYLALRVLGRGDESIEGEGWGS-IWKFNVAPKVRDFIWRTLRNLL 298
IW + G S+K Y W IW + P +WR + N L
Sbjct: 344 IWCHSTNGTLSMKEVY-------ESKKHHYPKRKWAKLIWSKDYPPSKYLMVWRLMLNKL 396
Query: 299 PTRWGLSRRGVNVDTTCPYCDLE-EDINHALLLCTKVLEVW 338
PT L+ RG N+ + C C + E+ H C +W
Sbjct: 397 PTNENLTERGCNLPSMCSLCSKQSENSFHLYFECPYSFNIW 437
>IMGA|Medtr1g009220.1 contains similarity to reverse trancriptase,
related, related chr01_pseudomolecule_IMGAG_V3
1138065-1137052 H EGN_Mt090430 20090702
Length = 208
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 1/145 (0%)
Query: 114 NTLLYRVFKSKYFRDRRLLDAQTGHHPSFVSRVIMSFNM-VLKHGVRWRVGNGRRISVVK 172
+ L+ + K +YF L A G+ PS+ R IM + V++ WRV +G I + +
Sbjct: 5 DLLISQCLKERYFPRISFLRAFVGYCPSYTWRSIMQACVDVIEKIDIWRVRDGHLIHIWE 64
Query: 173 DPWLSIDGAFYVEDDSLFIDNTLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDIPLSV 232
D WLS + + + V D + + R W+ I + F + IL +P
Sbjct: 65 DNWLSYQNGHKIWSPKPSNCDIMFVSDFIHDDIRCWNAPLINDTFLPFEAQQILQLPFFF 124
Query: 233 RDLEDELIWHYDKKGNFSIKSCYYL 257
L+DE +W + FS+KS Y+
Sbjct: 125 SQLQDEFVWDVSRSTIFSVKSAYHF 149
>IMGA|Medtr2g056130.1 hypothetical protein
chr02_pseudomolecule_IMGAG_V3 15253178-15253955 H
EGN_Mt090430 20090702
Length = 128
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%)
Query: 229 PLSVRDLEDELIWHYDKKGNFSIKSCYYLALRVLGRGDESIEGEGWGSIWKFNVAPKVRD 288
PL +D+LIW +K G + ++S Y L + + + GW IWK V KV +
Sbjct: 43 PLIQSVYKDKLIWKAEKDGQYLVRSSYRLCVNTIVDNSHLHKPSGWNEIWKLEVPSKVNN 102
Query: 289 FIWRTLRNLLPTRWGLSRRGVN 310
F+WR RN LPT L+ RG N
Sbjct: 103 FVWRVCRNCLPTWARLTYRGRN 124
>IMGA|Medtr5g086160.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
33033257-33037285 E EGN_Mt090430 20090702
Length = 178
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Query: 240 IWHYDKKGNFSIKSCYYLALRVLGRGDESIEGEGWGSIWKFNVAPKVRDFIWRTLRNLLP 299
+W D G ++++S +R+ G + G+ W S+W V PK R+ WR R LP
Sbjct: 1 MWLADMSGVYTVRSGCNFGMRLAVEGKNHVTGD-WSSLWHTRVPPKTRNLAWRICRRCLP 59
Query: 300 TRWGLSRRGVNVDTTCPYCDLEEDIN-HALLLCTKVLEVWRVCRVEEAFTN 349
TR L R V C C+ + D + H L C + E W + + N
Sbjct: 60 TRRRLHERRVQGPLNCAVCEDQVDDDWHLLFHCKTMAEYWDIVGLAHTLQN 110
>IMGA|AC233100_8.1 RNA-directed DNA polymerase (reverse
transcriptase), related AC233100.6 38508-37656 H
EGN_Mt090430 20090702
Length = 186
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 67/173 (38%), Gaps = 37/173 (21%)
Query: 147 IMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGAFYVEDDSLFIDNTLLVKDLLVEGER 206
I + +V+K G+RWRVG+G I DPW+ D Y ++V L+ +
Sbjct: 45 IHASQIVVKGGLRWRVGDGSHIRACYDPWIRDDVRAYATSVVPTGMKNMMVSYLMEKNNS 104
Query: 207 QWDVAKIINLFSLMDIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCYYLALRVLGRGD 266
+W I LF+ D+ IL +S+ D +E DK+
Sbjct: 105 EWKTDVINELFNEKDVDNIL--AMSIMDEMEE-----DKR-------------------- 137
Query: 267 ESIEGEGWGSIWKFNVAPKVRDFIWRTLRNLLPTRWGLSRRGVNVDTTCPYCD 319
W R F+WR ++ LPTR L RGV+ C CD
Sbjct: 138 ----------CWNLQHVETTRYFLWRAIKGCLPTRHMLQTRGVHCSDRCAQCD 180
>IMGA|Medtr4g036130.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr04_pseudomolecule_IMGAG_V3
8800455-8799179 H EGN_Mt090430 20090702
Length = 226
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 58/134 (43%), Gaps = 23/134 (17%)
Query: 208 WDVAKIINLFSLMDIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCYYLALRVLGRGDE 267
W I NLF IL+ L ED+LIW +K N
Sbjct: 24 WKAPLIYNLFDASTAQFILNTLLHPLVTEDKLIWKGEKSDN------------------S 65
Query: 268 SIEGEG-WGSIWKFNVAPKVRDFIWRTLRNLLPTRWGLSRRGVNVDTTCPYCDLE-EDIN 325
+ G W IWK V PKV+ +WR R +R L+ GV+ C +C++ ED
Sbjct: 66 HLHAPGCWNLIWKLKVPPKVKSILWRICRG---SRGRLNSTGVHCPLDCVHCNINYEDNM 122
Query: 326 HALLLCTKVLEVWR 339
H L+ C KV++VWR
Sbjct: 123 HILIECPKVIQVWR 136
>IMGA|Medtr1g016440.1 probable reverse transcriptase At2g02650 -,
related, related chr01_pseudomolecule_IMGAG_V3
3173721-3173118 H EGN_Mt090430 20090702
Length = 143
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 237 DELIWHYDKKGNFSIKSCYYLALRVLGRGDES-IEGEGWGSIWKFNVAPKVRDFIWRTLR 295
D+++W D G +S++S Y +A R + I+GE W +IWK K R+ +WR
Sbjct: 18 DKVVWQ-DSNGLYSVRSGYRIAAREVASSTHYYIQGE-WNAIWKVQAPHKARNLLWRICW 75
Query: 296 NLLPTRWGLSRRGVNVDTTCPYCDLEEDIN-HALLLCTKVLEVW 338
+PTR L +R V C +CD EE+ N HA + E W
Sbjct: 76 GCIPTRSKLIQRHVPCTNRCTWCDGEEETNWHAFVGYDVARESW 119
>IMGA|Medtr1g016370.1 probable reverse transcriptase At2g02650 -,
related, related chr01_pseudomolecule_IMGAG_V3
3148938-3149541 H EGN_Mt090430 20090702
Length = 143
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 237 DELIWHYDKKGNFSIKSCYYLALRVLGRGDES-IEGEGWGSIWKFNVAPKVRDFIWRTLR 295
D+++W D G +S++S Y +A R + I+GE W +IWK K R+ +WR
Sbjct: 18 DKVVWQ-DSNGLYSVRSGYRIAAREVASSTHYYIQGE-WNAIWKVQAPHKARNLLWRICW 75
Query: 296 NLLPTRWGLSRRGVNVDTTCPYCDLEEDIN-HALLLCTKVLEVW 338
+PTR L +R V C +CD EE+ N HA + E W
Sbjct: 76 GCIPTRSKLIQRHVPCTNRCTWCDGEEETNWHAFVGYDVARESW 119
>IMGA|Medtr4g021840.1 RNA-directed DNA polymerase, related, putative
chr04_pseudomolecule_IMGAG_V3 4275704-4277642 H
EGN_Mt090430 20090702
Length = 171
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 38/52 (73%)
Query: 2 GFLKERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDE 53
G++K+++W+ INSW R LSK+G+E +IKSV+Q +P+Y MS L + D+
Sbjct: 112 GYIKDKIWRKINSWRGRSLSKSGKETMIKSVLQLIPSYIMSCSNLKRDMFDQ 163
>IMGA|AC232874_27.1 hypothetical protein AC232874.1 84446-85505 H
EGN_Mt090430 20090702
Length = 336
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 17/162 (10%)
Query: 196 LVKDLLVEGERQWDVAKIINLFSLMDIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCY 255
+VKDL+ ++W + +IN F +DI I I + + +DEL+W ++ KG +
Sbjct: 1 MVKDLIDHENKEWKIDVLINNFLAIDIPAIEQISIINTNHKDELMWMFEPKGGLHCQEWL 60
Query: 256 YLALRVLGRGDESIEGEGWGSIWKFNVAPKVRDFIWRTLRNLLPTRWGLSRRGVNVDTTC 315
+ + I+ + + S +F + ++ +WR L N LP R L +RGV
Sbjct: 61 H------SHSNLEIQNK-YISYNQF----QHKNLLWRILTNSLPIRSELEKRGVKCSPLY 109
Query: 316 PYCDLEEDI-NHALLLCTKVLEVW-----RVCRVEEAFTNLS 351
P C+++ +I H + C + W + +E+ +NLS
Sbjct: 110 PRCNIKVEILEHVFMTCQHISRTWFGSALNLKILEQPISNLS 151
>IMGA|Medtr3g147880.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V3
38411077-38409788 H EGN_Mt090430 20090702
Length = 359
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 246 KGNFSIKSCYYLALRVLGRGDESIEGEGWGSIWKFNVAPKVRDFIWRTLRNLLPTRWGLS 305
KG +S KS Y+ +L R + + IWK V+ ++ F+W+ + LPT+ L
Sbjct: 13 KGIYSTKSAYH---TLLNRFHDVENNHNFNWIWKLKVSSNIQFFMWQICLSSLPTKSILV 69
Query: 306 RRGVNVDTTCPYCDL-EEDINHALLLCTKVLEVWRVC 341
R + TCP C+ EE + H LL CT EVW+ C
Sbjct: 70 SRHIAPSATCPICNASEEAMIHCLLTCTIAKEVWKKC 106
>IMGA|Medtr2g129530.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
31333511-31334185 H EGN_Mt090430 20090702
Length = 122
Score = 57.4 bits (137), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Query: 58 MNSFWWGSKGS-EKKLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQ 105
MNSFWWG+ G K++ WL+W+++ K++GGMGF+DL+ N+A+L KQ
Sbjct: 1 MNSFWWGNGGGLNKEIKWLSWSKL-DLKENGGMGFKDLYMSNLALLGKQ 48
>IMGA|Medtr6g094210.1 RNA polymerase Rpb8;
chr06_pseudomolecule_IMGAG_V3 20682582-20686495 H
EGN_Mt090430 20090702
Length = 190
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 272 EGWGSIWKFNVAPKVRDFIWRTLRNLLPTRWGLSRRGVNVDTTCPYCDLEEDINHALL-- 329
E W I K V KV+ F+WRT RN LPTR L R+ V+ + CP CD E++ + L
Sbjct: 127 ENWMRISKLKVPNKVKLFLWRTARNCLPTRISLQRKQVDYPSICPCCDSEDEADSHLFFY 186
Query: 330 LCT 332
LCT
Sbjct: 187 LCT 189
>IMGA|Medtr7g127430.1 hypothetical protein
chr07_pseudomolecule_IMGAG_V3 29873082-29875620 E
EGN_Mt090430 20090702
Length = 344
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%)
Query: 169 SVVKDPWLSIDGAFYVEDDSLFIDNTLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDI 228
++ DPWL DG YV + + ++ V DL+ W+ I +F+ D + +
Sbjct: 117 AIWTDPWLREDGNSYVSSEKVQGTESMKVADLMDINGASWNWELIAGIFNEQDREAVSKL 176
Query: 229 PLSVRDLEDELIWHYDKKGNFSIKSCYYLA 258
L RD +D+LIW ++ +GN+++KS Y L+
Sbjct: 177 VLLNRDRDDKLIWKFNNQGNYTVKSAYRLS 206
>IMGA|Medtr3g103760.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V3
25622719-25621333 H EGN_Mt090430 20090702
Length = 441
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 102/260 (39%), Gaps = 13/260 (5%)
Query: 116 LLYRVFKSKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPW 175
L ++ +Y L A S + I+ VLK G WRVG+ S PW
Sbjct: 8 LWVQLLSDRYAMGVNTLLASARPSVSVIWSSILHARDVLKDGFSWRVGSDNS-SFWSCPW 66
Query: 176 LSIDGAFYVEDDSLFIDNTLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDIPLSVR-D 234
S+ + D L VKD++ ++ + TI +I
Sbjct: 67 SSLGILGRIPPYIDIHDLQLTVKDVISSNNPHTNI--LYTQLPPFAADTINNIHFKFNAS 124
Query: 235 LEDELIWHYDKKGNFSIKSCYYLALRVLGRGDESIEGEGWGS---IWKFNVAPKVRDFIW 291
+ED IWH +K G ++ KS Y +L R + I S IWK ++ K++ F W
Sbjct: 125 VEDTFIWHNNKNGTYTPKSGYSW---LLSRKELVIISNPPPSCSWIWKLHMPEKIKLFFW 181
Query: 292 RTLRNLLPTRWGLSRRGVNVDTTCPYCDL-EEDINHALLLCTKVLEVWRVCRVEEAFTNL 350
N +PT L+ R + C C L +E H + C +W+ R+ +
Sbjct: 182 LACHNSVPTLSMLNHRNIAPSPVCSRCGLHDETFLHCVRDCAHSKSIWQ--RIGFIHNDF 239
Query: 351 SFKSLYLQVLKQNNNEKLAF 370
S+ + LK N+ L+F
Sbjct: 240 FSTSVTHEWLKNNSVGHLSF 259
>IMGA|Medtr2g104180.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
24503551-24503384 H EGN_Mt090430 20090702
Length = 55
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 3 FLKERMWKHINSWSNRFLSKAGREILIKSVIQALPAYCMSVFEL 46
++++R+WK I SW + L KAGREILIK V+Q +PAY MS+F L
Sbjct: 7 YVRDRIWKRIESWHGKHLFKAGREILIKFVVQLVPAYQMSIFLL 50
>IMGA|Medtr4g107980.1 hypothetical protein
chr04_pseudomolecule_IMGAG_V3 23734799-23733694 H
EGN_Mt090430 20090702
Length = 255
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 230 LSVRDLEDELIWHYDKKGNFSIKSCYYL----ALRVLGRGDESIEGEGWGSIWKFNVAPK 285
LS R ED+L+W +K G FS+K Y++ L L + W IW ++ +
Sbjct: 3 LSSRLPEDKLVWPAEKNGIFSVKFAYHILCNINLSHLPTSSSHSHSKLWNRIWSSHLPTR 62
Query: 286 VRDFIWRTLRNLLPTRWGLSRRG 308
V +FIWR +N++PTR L RRG
Sbjct: 63 VWNFIWRLAKNIIPTRGNLKRRG 85
>IMGA|Medtr1g025190.1 RNA-directed DNA polymerase, related
chr01_pseudomolecule_IMGAG_V3 6196727-6197277 H
EGN_Mt090430 20090702
Length = 142
Score = 55.8 bits (133), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 45/85 (52%)
Query: 208 WDVAKIINLFSLMDIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCYYLALRVLGRGDE 267
W+ + LF+ D++ I+ IPL+ + +IW G +S+K+ Y L L + + ++
Sbjct: 46 WNQGFLAALFNTGDVNAIMRIPLTYMEQHYTIIWRLTSNGEYSLKTAYKLCLSTILQNNQ 105
Query: 268 SIEGEGWGSIWKFNVAPKVRDFIWR 292
S W +IWK +V K++ WR
Sbjct: 106 SQTLGNWSNIWKLDVPSKMKHLSWR 130
>IMGA|AC235567_37.1 RNA-directed DNA polymerase (reverse
transcriptase), related AC235567.1 138545-137628 E
EGN_Mt090430 20090702
Length = 51
Score = 55.1 bits (131), Expect = 9e-08, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 41 MSVFELPLCLCDELEKMMNSFWWGSKGSEKKLHWLAWNRMCGSKKDGGMGF 91
M+ F +P L +E+EKM+NSFWWGSK K + W W ++ K+ G+G
Sbjct: 1 MNAFLMPKTLANEIEKMINSFWWGSKNGNKDIKWTQWEKLTMRKEYRGLGL 51
>IMGA|Medtr8g119160.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 26940646-26936997 H
EGN_Mt090430 20090702
Length = 255
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 277 IWKFNVAPKVRDFIWRTLRNLLPTRWGLSRRGVNVDTTCPYC---DLEEDINHALLLCTK 333
IW +V PK++ F WR L N LPTR L RGV + C C DLE+++ H + C
Sbjct: 29 IWSLHVPPKIKHFFWRLLHNCLPTRSNLQGRGVPCQSACVTCNNNDLEDEM-HLFMHCKF 87
Query: 334 VLEVWRVCRVEEAFTNLSFKSLYLQVLKQNNNEKLAFYLLCRMECV 379
++ W+ + S +Q ++ ++ C ++C
Sbjct: 88 AIDCWKAANLWGIIAPYMTSSGMVQPATPVWSKPPTDWIKCNVDCA 133
>IMGA|Medtr8g073360.1 Shikimate kinase; Carbohydrate kinase,
thermoresistant glucokinase
chr08_pseudomolecule_IMGAG_V3 14301477-14299146 E
EGN_Mt090430 20090702
Length = 281
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 194 TLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDIPLSVRDLEDELIWHYDKKGNFSI 251
L V DL+V+G+R+WD AKI +LFS IL +PL + D +D +IW D GN+S+
Sbjct: 12 NLRVSDLMVQGKRRWDEAKIQHLFSNGVAAAILAVPLLLVDKDDRVIWSEDLHGNYSV 69
>IMGA|Medtr8g015930.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 2958052-2959827 H
EGN_Mt090430 20090702
Length = 78
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 275 GSIWKFNVAPKVRDFIWRTLRNLLPTRWGLSRRGVNVDTTCPYC--DLEEDINHALLLCT 332
G IW V PK++ F WR LR L TR L RG++ +TC C DLE++++ + +C
Sbjct: 9 GLIWSLCVPPKIKYFCWRLLRGCLSTRSNLQGRGIHCQSTCVVCNRDLEDEMHMFMHICY 68
Query: 333 KVLE 336
++LE
Sbjct: 69 RLLE 72
>IMGA|Medtr3g149300.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
39012800-39013657 H EGN_Mt090430 20090702
Length = 264
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%)
Query: 32 VIQALPAYCMSVFELPLCLCDELEKMMNSFWWGSKGSEKKLHWLAWNRMCGSKKDGGMGF 91
++ A+ + + ++P + ++ + SF WG KK+ W+AW C K +GG+G
Sbjct: 1 MLSAILIFYLGFMKMPTKVWKKVVAIQRSFLWGGANGSKKICWVAWKDACKPKMEGGLGV 60
Query: 92 RDLHCFNMAMLAKQGXRLLTSPNTLLYRVFKSKY 125
RDL N+A+L K LL + + ++Y
Sbjct: 61 RDLRLVNLALLGKWRWILLQKETGVWRMIIAARY 94
>IMGA|Medtr5g025230.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
10087747-10088046 H EGN_Mt090430 20090702
Length = 99
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%)
Query: 97 FNMAMLAKQGXRLLTSPNTLLYRVFKSKYFRDRRLLDAQTGHHPSFVSRVIMSFNMVLKH 156
FN A+L KQ RL+T+ N+++ +VFKS+YF +++ G+ PS+ R + + +
Sbjct: 15 FNKALLGKQCWRLITNTNSIIAKVFKSRYFPRSNFMESTIGYQPSYSWRSMFNAKDFIDL 74
Query: 157 GVRWRVGNGR 166
G R +GNG+
Sbjct: 75 GARSSIGNGQ 84
>IMGA|Medtr4g129200.1 hypothetical protein
chr04_pseudomolecule_IMGAG_V3 30677420-30675553 H
EGN_Mt090430 20090702
Length = 120
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 21/109 (19%)
Query: 225 ILDIPLSVRDLEDELIWHYDKKGNFSIKS--CYYLALRVLGRGDESIE-----GEGWGSI 277
I++IPLSVR +D LIWH+ K N+ ++S C RV+ + S E G G+G
Sbjct: 7 IINIPLSVRCSDDMLIWHWKKDENYCVRSAHCILCEERVISLTESSNETVLVYGRGFGMF 66
Query: 278 W-----KFNV--------APK-VRDFIWRTLRNLLPTRWGLSRRGVNVD 312
+F V PK ++F+WR +++LPTR L ++G+ +D
Sbjct: 67 LSQKCSEFPVEISDLECYKPKSAQNFLWRLAKDILPTRRNLRKKGIYLD 115
>IMGA|Medtr4g023500.1 hypothetical protein
chr04_pseudomolecule_IMGAG_V3 5133365-5132849 H
EGN_Mt090430 20090702
Length = 92
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 14 SW--SNRFLSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFWWGSKGSEKK 71
SW N+ L+KAGR L+ + ++P+Y M + LP +C++++K +SF W ++
Sbjct: 14 SWCKKNKLLNKAGRLALVPLELTSIPSYYMYIASLPYSICEQIDKYAHSFLWNGD-KDRG 72
Query: 72 LHWLAWNRMCGSKKDGGMG 90
+H + W +M K GG+G
Sbjct: 73 VHMVEWYKMLRPHKFGGLG 91
>IMGA|Medtr8g109180.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 24412558-24413020 H
EGN_Mt090430 20090702
Length = 99
Score = 53.1 bits (126), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 50 LCDELEKMMNSFWWGSKGSEKKLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRL 109
L ++ +++SFWW SK E K+HW+ + +C K DG +GF +L FN +L Q +
Sbjct: 19 LTSQILNILSSFWWESKDFEGKVHWIMRDHLCKPKSDGEIGFMNLRGFNEVLLRWQL-MV 77
Query: 110 LTSPNTLLYRVFKSKYF 126
L +++ + KY+
Sbjct: 78 LVYVGSIMAKFLNDKYY 94
>IMGA|Medtr5g034410.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
14125083-14125370 H EGN_Mt090430 20090702
Length = 95
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 271 GEGWGSIWKFNVAPKVRDFIWRTLRNLLPTRWGLSRRGVNVDTTCPYCDLE-EDINHALL 329
G W IW ++ P+VR+FIWR + ++PTR L RR V +DT P C + E + +
Sbjct: 16 GNIWKKIWSIHL-PRVRNFIWRLAKKIIPTRGNLCRRDVALDTIFPLCFQDMESTDLLFM 74
Query: 330 LCTKVLEVW 338
C V + W
Sbjct: 75 QCPLVHQAW 83
>IMGA|Medtr7g077260.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr07_pseudomolecule_IMGAG_V3
16160383-16159664 H EGN_Mt090430 20090702
Length = 201
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 230 LSVRDLEDELIWHYDKKGNFSIKSCYYLALRVLGR----GDESIEGEGWGSIWKFNVAPK 285
LS + EDE W G +S+KS YY L+ L G +++ +WK + K
Sbjct: 36 LSRVEREDEWSWTNSPDGRYSVKSAYYQLLKGLPTSGTPGGMTLQAVS--RVWKSWASSK 93
Query: 286 VRDFIWRTLRNLLPTRWGLSRRGVNV---DTTCPYCDLE-EDINHALLLCTKVLEVW 338
V F W+ L + +PTR L RRGV + C +CD + + H L C L VW
Sbjct: 94 VIVFSWQLLLDRIPTRNNLIRRGVPILVDRVGCVFCDSQSKSAVHLFLSCPSSLSVW 150
>IMGA|Medtr1g149770.1 contains similarity to reverse trancriptase,
related, related chr01_pseudomolecule_IMGAG_V3
33129977-33130712 E EGN_Mt090430 20090702
Length = 100
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 101 MLAKQGXRLLTSPNTLLYRVFKSKYFRDRRLLDAQTGHHPSFVSRVIMSFNM-VLKHGVR 159
MLA+QG R++ + +L K +YF L+A G++PS+ R I+ M V+ H
Sbjct: 1 MLARQGWRIIQNEESLFGSCLKRRYFPRTNFLNATLGYNPSYTWRSILQDRMEVIDHVGL 60
Query: 160 WRVGNGRRISVVKDPWLS 177
WRVG+G+ + D WL
Sbjct: 61 WRVGDGKSTKIWGDNWLP 78
>IMGA|Medtr1g065590.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr01_pseudomolecule_IMGAG_V3
13071141-13070680 H EGN_Mt090430 20090702
Length = 153
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Query: 208 WDVAKIINLFSLMDIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCYYLALRVLGRGDE 267
W+ I + + + I + L R D +IW ++IKS Y + L + +G
Sbjct: 14 WNQELIASFMNAQETFDICKVHLHSRVDHDAIIWEPSPNSAYTIKSDYKMCLSLSDQGTH 73
Query: 268 SIEGEGWGSIWKFNVAPKVRDFIWRTLRNLLPTRWGLSRRGVNVDTTCPYCDLE-EDINH 326
+ W IW + K++ F+W L L + L GV+ + C C+ + ED H
Sbjct: 74 YQAIDDWRLIWNMRIHQKLKHFLWTLLHYCLSICFNLQDHGVHRQSACVVCNTDIEDEMH 133
Query: 327 ALLLCTKVLEVWR 339
+ T + W+
Sbjct: 134 MFIHFTFAINCWK 146
>IMGA|Medtr1g024010.1 hypothetical protein
chr01_pseudomolecule_IMGAG_V3 5523062-5523929 E
EGN_Mt090430 20090702
Length = 106
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 274 WGSIWKFNVAPKVRDFIWRTLRNLLPTRWGLSRRGVNVDTTCPYCDLEEDIN-HALLLCT 332
W I K V P++R +WR + LPT L ++G+ +D TC +C L + H +C
Sbjct: 18 WNIIRKQQVPPRIRSLLWRLAHSCLPTHAHLIQKGLTIDDTCVHCGLSIKSHIHYSFVCA 77
Query: 333 KVLEVWRVCRVEEAFTNL 350
K + W + +++ +L
Sbjct: 78 KAMSCWELVQLDSIVCDL 95
>IMGA|Medtr7g080740.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr07_pseudomolecule_IMGAG_V3
17251172-17255125 E EGN_Mt090430 20090702
Length = 230
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Query: 219 LMDIHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCYYLALRVLGRGDESIEGEGWGSIW 278
L + +LD + ++ D W D ++++ Y + +IEG G IW
Sbjct: 12 LGECRALLDNVVVQYNVYDRWQWDPDPHEGYTVRGAYQ---ALTSMEVPTIEGGG-ELIW 67
Query: 279 KFNVAPKVRDFIWRTLRNLLPTRWGLSRRGV--NVDTTC-PYCDLEEDINHALLLCTKVL 335
V KV WR L++ LPTR L RRG+ +TTC C LEE +H L C
Sbjct: 68 HKQVPLKVSILAWRMLKDKLPTRSNLQRRGILAAANTTCLSGCGLEETASHIFLYCEVFG 127
Query: 336 EVWRVCRVEEAFTNLSFKSLYLQVL 360
+W+ R T L + +LQ++
Sbjct: 128 SLWQHIRSWIGMT-LKARRSFLQLI 151
>IMGA|Medtr5g105670.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr05_pseudomolecule_IMGAG_V3
42445166-42445565 H EGN_Mt090430 20090702
Length = 118
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 19/131 (14%)
Query: 75 LAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFKSKYFRDRRLLDA 134
L+W R+ K GM F+ L F +PN+LL R+FK+KYF L +
Sbjct: 4 LSWKRLMPPKNFDGMRFKSLKFF-------------INPNSLLSRLFKTKYFLTSDYLTS 50
Query: 135 QTGHHPSFVSRVIMSFNMVLKHGVRWRVGNGRRISVVKDPWLSIDGAFYVEDDSLFIDNT 194
H+ S+V R + +V + +W G +S+ W ID + SL + T
Sbjct: 51 SLRHNLSYVWRSVWMAKIVTQSRFKWSANIGENMSIWDLEWFEIDHHI---EKSLGLHTT 107
Query: 195 ---LLVKDLLV 202
+ V DL+V
Sbjct: 108 FKNMKVSDLMV 118
>IMGA|Medtr3g069130.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
16478709-16479799 E EGN_Mt090430 20090702
Length = 239
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 241 WHYDKKGNFSIKSCYYLALRVLGRGDESIEGEGWGSIWKFNVAPKVRDFIWRTLRNLLPT 300
W D +S++ Y L L L GD+ + G + +W V KV F W+ +R+ LPT
Sbjct: 35 WLPDTAEGYSVRGAYDLDL--LTTGDDPLMGLPFDLVWHPQVPFKVSVFAWQLIRDRLPT 92
Query: 301 RWGLSRRGV--NVDTTCPY-CDLEEDINHALLLCTKVLEVWRVCR 342
+ L+ RGV D C + C E +H L CT +W+ R
Sbjct: 93 KANLATRGVVPTDDIFCVFGCVHVETADHLFLSCTTFASLWQQVR 137
>IMGA|Medtr7g077740.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr07_pseudomolecule_IMGAG_V3
16448205-16447339 E EGN_Mt090430 20090702
Length = 254
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
Query: 233 RDLEDELIWHYDKKGNFSIKSCYYLALRVLGRGDESIEGEGWGSIWKFNVAPKVRDFIWR 292
++ D W D G +S+ Y+ L + G+ IW V KV F WR
Sbjct: 41 HNISDRWQWDSDYGGGYSVGGAYH-HLTTQAEPPDVPLGD---LIWHKQVPLKVSIFAWR 96
Query: 293 TLRNLLPTRWGLSRRGVNVDTTC---PYCDLEEDINHALLLCTKVLEVWRVCR 342
LR+ LPT+ L RRG+ C C +EE +H + CT +W + R
Sbjct: 97 LLRDRLPTKNHLFRRGIINSEACMCVTGCGMEETTSHLFIHCTTFGSLWHLIR 149
>IMGA|Medtr1g105630.1 H+-transporting two-sector ATPase, alpha/beta
subunit, central region, related, related
chr01_pseudomolecule_IMGAG_V3 21837322-21838518 E
EGN_Mt090430 20090702
Length = 362
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 235 LEDELIWHYDKKGNFSIKSCYYLALRVLGRGD---ESIEGEGWGSIWKFNVAPKVRDFIW 291
+ED+ W+ + +S+KS Y L GR + +E +G+IWK V KV F+W
Sbjct: 81 VEDKWTWNLEDAEVYSVKSLYD-KLEEDGRVEGIHTEMEKYVFGNIWKVGVPSKVTAFVW 139
Query: 292 RTLRNLLPTRWGLSRR---GVNVDTTCPYCDLE-EDINHALLLCTKVLEVW 338
+ L + +PTR L R ++ T C +C++ E +H L C V VW
Sbjct: 140 KALLDRIPTRLNLEIRHCLPPDIGTNCVWCEVGVETTSHIFLHCDLVRNVW 190
>IMGA|AC233668_9.1 RNA-directed DNA polymerase (reverse
transcriptase), related AC233668.2 20356-20538 H
EGN_Mt090430 20090702
Length = 60
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 30/38 (78%)
Query: 2 GFLKERMWKHINSWSNRFLSKAGREILIKSVIQALPAY 39
GF+K+R+W INSWS++ L K RE++IK V+Q +P+Y
Sbjct: 22 GFIKDRIWHKINSWSSKCLFKVSREVMIKPVLQFIPSY 59
>IMGA|Medtr6g012820.1 hypothetical protein
chr06_pseudomolecule_IMGAG_V3 2461097-2461730 H
EGN_Mt090430 20090702
Length = 74
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 20 LSKAGREILIKSVIQALPAYCMSVFELPLCLCDELEKMMNSFWWGSKGSEKKLHWLAWNR 79
LS AGR L++SV+ L Y LP + + +EK+M +F WGS S+++ H ++
Sbjct: 6 LSFAGRVTLVQSVLDVLSTYVTWTTLLPKGVSNHIEKLMRNFIWGSTDSKRRWHSISSEN 65
Query: 80 MCGSKKDGG 88
+C K GG
Sbjct: 66 VCRPKYQGG 74
>IMGA|Medtr1g133000.1 Putative non-LTR retroelement reverse
transcriptase, related, chr01_pseudomolecule_IMGAG_V3
29847563-29845198 H EGN_Mt090430 20090702
Length = 335
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 237 DELIWHYDKKGNFSIKSCYYLALRVLGRGDESIEGEGWG--------SIWKFNVAPKVRD 288
DE W ++ G FS+ S Y V G IE E WG +WK KV
Sbjct: 103 DEWWWKLEEDGRFSVSSLYKKLEVVAG-----IENE-WGLEEKHVFSQVWKSPAPSKVVA 156
Query: 289 FIWRTLRNLLPTRWGLSRRGV---NVDTTCPYCDLEED-INHALLLCTKVLEVW 338
WR+L N +PTR L N+ C CDLEE+ NH L C V VW
Sbjct: 157 LSWRSLLNRIPTRLNLLYHHALPPNLSLHCVLCDLEEESTNHLFLHCNVVSSVW 210
>IMGA|Medtr2g111150.1 probable reverse transcriptase At2g02650 -,
related, putative chr02_pseudomolecule_IMGAG_V3
26303076-26303699 H EGN_Mt090430 20090702
Length = 188
Score = 49.7 bits (117), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 50/119 (42%), Gaps = 22/119 (18%)
Query: 222 IHTILDIPLSVRDLEDELIWHYDKKGNFSIKSCYYLALRVLGRGDE-SIEGEGWGSIWKF 280
+ ILD PL D + W ++ G +++K+ Y LA+ L D +EGE
Sbjct: 2 VQAILDTPLFAEVQNDRITWMMERNGRYTVKTGYKLAMMELLHTDWFHVEGE-------- 53
Query: 281 NVAPKVRDFIWRTLRNLLPTRWGLSRRGVNVDTTCPYCDLE-EDINHALLLCTKVLEVW 338
+ +PTR L R V + CP+CD ED HA + CT E W
Sbjct: 54 ------------ICKGCVPTRLRLRSRYVQCEVICPWCDTAVEDDWHAFVGCTIARESW 100
>IMGA|Medtr5g100090.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative chr05_pseudomolecule_IMGAG_V3
40059016-40059320 H EGN_Mt090430 20090702
Length = 74
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 235 LEDELIWHYDKKGNFSIKSCYYLALRVLGRGDESIEGEGWGSIWKFNVAPKVRDFIWRTL 294
L+D+LI +K +S+KS Y L + L W IW N+ PK+++ +W+
Sbjct: 5 LDDKLIRKVEKDVKYSVKSVYMLCMEGLVDISHLQRPCFWSDIWHLNIPPKLKNLVWQMC 64
Query: 295 RNLLPTR 301
R LPTR
Sbjct: 65 RRCLPTR 71
>IMGA|Medtr5g027340.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
11121104-11121465 H EGN_Mt090430 20090702
Length = 99
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 273 GWGSIWKFNVAPKVRDFIWRTLRNLLPTRWGLSRRGVNVDTTCPYCDLEEDINHALLLCT 332
W IWK +V KVR F+WR LPTR L+++GV+ + +C C++ + + + +
Sbjct: 15 NWNLIWKQHVPHKVRSFLWRVAHTCLPTRAQLNQKGVHCEESCVSCEVLTETHMHVFFVS 74
Query: 333 K 333
K
Sbjct: 75 K 75
>IMGA|Medtr6g092910.1 H+-transporting two-sector ATPase, alpha/beta
subunit, central region, related, putative
chr06_pseudomolecule_IMGAG_V3 19708354-19711332 E
EGN_Mt090430 20090702
Length = 215
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 234 DLEDELIWHYDKKGNFSIKSCYY-LALRVLGRGDESIEGEG-WGSIWKFNVAPKVRDFIW 291
D +DE W + G +S+KS Y L VL +E +G + ++W+ PKV F W
Sbjct: 21 DKKDECRWKLEDNGIYSVKSAYLKLEDVVLKEDIWGVEEKGVFENMWRSPAPPKVIAFGW 80
Query: 292 RTLRNLLPTRWGLSRRGV---NVDTTCPYCDL-EEDINHALLLCTKVLEVW-RVCRVEEA 346
R N + TR L+ V T C +C+L EE + H L C VW RV + E
Sbjct: 81 RVFLNRISTRDNLALWNALPPEVSTLCVFCNLKEESVTHIFLHCDVASLVWSRVMKCEGG 140
Query: 347 FTNLSFKSLYL 357
N K +L
Sbjct: 141 RANKVTKGFWL 151
>IMGA|Medtr4g101430.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr04_pseudomolecule_IMGAG_V3
22041803-22042956 H EGN_Mt090430 20090702
Length = 253
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 60/169 (35%), Gaps = 48/169 (28%)
Query: 171 VKDPWLSIDGAFYVEDDSLFIDNTLLVKDLLVEGERQWDVAKIINLFSLMDIHTILDIPL 230
+ DPW+ +++ ++L V DL+ + ER WD+ KI +LFS + ILD PL
Sbjct: 1 MNDPWVRGVHGSWIQSPQGQDVHSLRVSDLIADEERVWDIDKIESLFSDDMVQAILDTPL 60
Query: 231 SVRDLEDELIWHYDKKGNFSIKSCYYLALRVLGRGDESIEGEGWGSIWKFNVAPKVRDFI 290
D + W + G
Sbjct: 61 FAEVQNDIIAWMMKRNG------------------------------------------- 77
Query: 291 WRTLRNLLPTRWGLSRRGVNVDTTCPYCDLE-EDINHALLLCTKVLEVW 338
R +PTR L R V + CP CD ED HA + CT E W
Sbjct: 78 ----RGCVPTRLRLRSRHVQCELVCPCCDTAVEDDWHAFVGCTVARESW 122
>IMGA|Medtr8g026580.1 H+-transporting two-sector ATPase, alpha/beta
subunit, central region, related, related
chr08_pseudomolecule_IMGAG_V3 5746396-5747833 H
EGN_Mt090430 20090702
Length = 153
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 277 IWKFNVAPKVRDFIWRTLRNLLPTRWGLSRRGV---NVDTTCPYCDLEEDINHALLLCTK 333
IW V KV F WR LRN PT+ L RRG+ N + C +EE INH L C
Sbjct: 48 IWNKAVMLKVSIFTWRLLRNQNPTKDNLVRRGIIQPNFNVCVRCCGIEESINHLFLRCDV 107
Query: 334 VLEVWR-----VCRVEEAFTNLSFKSLYLQVLKQNNNEKLAFYL 372
+W +C +LS L+ +L Q ++K+++Y+
Sbjct: 108 FGSIWLLVRQWLCIHSLTLLHLSDHVLHFSMLAQ-CSKKISYYI 150
>IMGA|Medtr2g014330.1 hypothetical protein
chr02_pseudomolecule_IMGAG_V3 3620402-3620930 H
EGN_Mt090430 20090702
Length = 89
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 18/105 (17%)
Query: 57 MMNSFWWGSKGSEKK-LHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNT 115
M+NSF W ++G++ K + WL W+++ SKKDG MGFR+ + F
Sbjct: 1 MINSFGWCNEGNKNKGVKWLFWDKLSTSKKDGCMGFRNPYIF----------------KA 44
Query: 116 LLYRVFKSKYFRDR-RLLDAQTGHHPSFVSRVIMSFNMVLKHGVR 159
+ +FK+ Y + LL+A G + ++ R I N +LK VR
Sbjct: 45 MYNLIFKAMYLTVQISLLEASWGSNSIYLWRSICKTNPILKQRVR 89
>IMGA|Medtr2g013680.1 hypothetical protein
chr02_pseudomolecule_IMGAG_V3 3141918-3141390 H
EGN_Mt090430 20090702
Length = 89
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 18/105 (17%)
Query: 57 MMNSFWWGSKGSEKK-LHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNT 115
M+NSF W ++G++ K + WL W+++ SKKDG MGFR+ + F
Sbjct: 1 MINSFGWCNEGNKNKGVKWLFWDKLSTSKKDGCMGFRNPYIF----------------KA 44
Query: 116 LLYRVFKSKYFRDR-RLLDAQTGHHPSFVSRVIMSFNMVLKHGVR 159
+ +FK+ Y + LL+A G + ++ R I N +LK VR
Sbjct: 45 MYNLIFKAMYLTVQISLLEASWGSNSIYLWRSICKTNPILKQRVR 89
>IMGA|Medtr3g013410.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
2559713-2560955 H EGN_Mt090430 20090702
Length = 176
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 70 KKLHWLAWNRMCGSKKDGGMGFRDLHCFNMAMLAKQGXRLLTSPNTLLYRVFKSKYFRDR 129
+K+ W+ W+ +C S+++GG+G R L FN+ +L K R+L L Y V K++Y +
Sbjct: 46 RKIAWVDWDSICLSREEGGLGVRKLREFNVELLRKWCWRMLVDKEGLWYLVLKARYGEEG 105
Query: 130 RLLDAQTGHHPSFVSRVIMSFNMVLKHGV 158
L + G S R++ S ++HGV
Sbjct: 106 GRL-KEGGRDSSTWWRMVSS----IRHGV 129
>IMGA|Medtr8g109790.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 24701918-24704086 E
EGN_Mt090430 20090702
Length = 272
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 19/170 (11%)
Query: 237 DELIWHYDKKGNFSIKSCYYLALRVLGRGDESIEGEGWGSIWKFNVAPKVRDFIWRTLRN 296
D+ W D +S++ Y R + + ++ +W + KV F+WR LRN
Sbjct: 81 DKWSWTLDTVHGYSVREAY----RFITNHGDHLDRSSVDKVWHSYIPSKVSLFVWRLLRN 136
Query: 297 LLPTRWGLSRRGV---NVDTTCPYCDLEEDINHALLLCTKVLEVWRVCRVEEAFTNLSFK 353
LPTR L RR + N CD+ E +H L C L +W + A+ LS
Sbjct: 137 RLPTRGNLLRRNILHANNVMCVIGCDVPETASHLFLRCDNSLILWSLV---AAWLGLSL- 192
Query: 354 SLYLQVLKQNNNEKLAFYLLC------RMECVGCSEQISLATNGLDSLEC 397
+Y L+Q++ + +Y R +C+ +E + + N L+ ++C
Sbjct: 193 -VYSNDLRQHHIQFSIWYACVWLIWKDRNKCIFQNEA-AHSVNLLNKVKC 240