Jatropha Genome Database

JcCB0068361.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0068361.10 + phase: 0 /partial
         (135 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g029600.1 Alkaline phytoceramidase chr02_pseudomolecu...   213   3e-56
IMGA|Medtr8g147670.1 Alkaline phytoceramidase chr08_pseudomolecu...   206   3e-54

>IMGA|Medtr2g029600.1 Alkaline phytoceramidase
           chr02_pseudomolecule_IMGAG_V3 7924422-7926820 E
           EGN_Mt090430 20090702
          Length = 255

 Score =  213 bits (541), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 102/135 (75%), Positives = 109/135 (80%)

Query: 1   MADGISSFWGPVTSTTECCEKNYANSSYIAEFYNTISNIPCXXXXXXXXXXXXRQQFEKR 60
           MA+ ISSFWGPVTST ECCEKNYA SSYIAEFYNTISNIP             RQ+FEKR
Sbjct: 1   MAETISSFWGPVTSTIECCEKNYAYSSYIAEFYNTISNIPTILLAFIGLINAFRQRFEKR 60

Query: 61  FSVLHISNMILAIGSMFFHATLQRVQQQSDETPMVWEMLLYLYILYSPDWHYHSTMPTFL 120
           FSVLH+SNM LA GSM +HATLQ VQQQSDETPMVWE+LLY+YILYSPDWHY STMP FL
Sbjct: 61  FSVLHVSNMTLAFGSMLYHATLQHVQQQSDETPMVWEILLYMYILYSPDWHYRSTMPIFL 120

Query: 121 FLYGAVFAMVHSVVH 135
           F YGA FA+VHS V 
Sbjct: 121 FFYGAAFAVVHSFVR 135


>IMGA|Medtr8g147670.1 Alkaline phytoceramidase
           chr08_pseudomolecule_IMGAG_V3 36413340-36417311 F
           EGN_Mt090430 20090702
          Length = 251

 Score =  206 bits (524), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 96/128 (75%), Positives = 106/128 (82%)

Query: 5   ISSFWGPVTSTTECCEKNYANSSYIAEFYNTISNIPCXXXXXXXXXXXXRQQFEKRFSVL 64
           +SSFWGPVTST ECCE+NYA+S+YIAE YNTISNIP             RQ+FEKRFSVL
Sbjct: 1   MSSFWGPVTSTKECCEQNYAHSTYIAELYNTISNIPAIVLALIGLINALRQRFEKRFSVL 60

Query: 65  HISNMILAIGSMFFHATLQRVQQQSDETPMVWEMLLYLYILYSPDWHYHSTMPTFLFLYG 124
           H+SNM LAIGSM +HATLQRVQQQ DETPMVWE+LLY+YILYSPDWHY STMP FLFLYG
Sbjct: 61  HLSNMALAIGSMLYHATLQRVQQQGDETPMVWEVLLYMYILYSPDWHYRSTMPIFLFLYG 120

Query: 125 AVFAMVHS 132
           A FA+ HS
Sbjct: 121 AGFAVAHS 128