Jatropha Genome Database

JcCB0066311.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0066311.10 - phase: 0 /partial
         (243 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g093690.1 Aromatic amino acid beta-eliminating lyase/...   400   e-112
IMGA|Medtr1g093680.2 Aromatic amino acid beta-eliminating lyase/...   400   e-112
IMGA|Medtr1g093680.1 Aromatic amino acid beta-eliminating lyase/...   399   e-112
IMGA|Medtr1g093680.3 Aromatic amino acid beta-eliminating lyase/...   364   e-101
IMGA|Medtr1g093680.4 Aromatic amino acid beta-eliminating lyase/...   293   5e-80

>IMGA|Medtr1g093690.1 Aromatic amino acid beta-eliminating
           lyase/threonine aldolase; Polynucleotidyl transferase,
           Ribonuclease H fold; ; chr01_pseudomolecule_IMGAG_V3
           19155734-19135194 E EGN_Mt090430 20090702
          Length = 480

 Score =  400 bits (1029), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 197/243 (81%), Positives = 220/243 (90%), Gaps = 8/243 (3%)

Query: 1   MVTRTVDLRSDTVTKPTEAMRAAMANAEVDDDVLGDDPNALRLQTEMARIMGKEAALFVP 60
           MVTR VDLRSDTVTKPTEAMRAAMA+AEVDDDVLG DP AL L+TEMA++MGKEAALFVP
Sbjct: 126 MVTRNVDLRSDTVTKPTEAMRAAMASAEVDDDVLGYDPTALLLETEMAKMMGKEAALFVP 185

Query: 61  SGTMGNLISVLVHCDIRGSEVILGHDSHIHIYENGGISTLGGVHPRTVKNNKDGTMDIDL 120
           SGTMGNLI VLVHCDIRGSEVILG + HI+IYENGGIST+GGVHPR VKNN DGT+DIDL
Sbjct: 186 SGTMGNLICVLVHCDIRGSEVILGDNCHINIYENGGISTIGGVHPRQVKNNDDGTIDIDL 245

Query: 121 IEAAIRDPKWQLVYPTTRLICLENSHANCGGRCLSVEYTDKVGELAKKYGLKLHIDGARI 180
           IEAAIRDP+ +L++P+TRLICLENSHAN GGRCLSVEYTD+VGE+AKK+GLKLHIDGARI
Sbjct: 246 IEAAIRDPRGELMFPSTRLICLENSHANSGGRCLSVEYTDRVGEVAKKHGLKLHIDGARI 305

Query: 181 FNAAAALKVPVHRLVQAADSVSVCLSKGLGAPVGTVIVGSKSFIAKVLTEICFESRILRK 240
           FNA+AAL VPV RLV+AADSVSVCLSKG+GAPVG+VIVGSK+FI K        ++ LRK
Sbjct: 306 FNASAALGVPVDRLVEAADSVSVCLSKGIGAPVGSVIVGSKNFITK--------AKRLRK 357

Query: 241 TLG 243
           TLG
Sbjct: 358 TLG 360


>IMGA|Medtr1g093680.2 Aromatic amino acid beta-eliminating
           lyase/threonine aldolase; ;
           chr01_pseudomolecule_IMGAG_V3 19140353-19135194 E
           EGN_Mt090430 20090702
          Length = 370

 Score =  400 bits (1028), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 197/243 (81%), Positives = 220/243 (90%), Gaps = 8/243 (3%)

Query: 1   MVTRTVDLRSDTVTKPTEAMRAAMANAEVDDDVLGDDPNALRLQTEMARIMGKEAALFVP 60
           MVTR VDLRSDTVTKPTEAMRAAMA+AEVDDDVLG DP AL L+TEMA++MGKEAALFVP
Sbjct: 16  MVTRNVDLRSDTVTKPTEAMRAAMASAEVDDDVLGYDPTALLLETEMAKMMGKEAALFVP 75

Query: 61  SGTMGNLISVLVHCDIRGSEVILGHDSHIHIYENGGISTLGGVHPRTVKNNKDGTMDIDL 120
           SGTMGNLI VLVHCDIRGSEVILG + HI+IYENGGIST+GGVHPR VKNN DGT+DIDL
Sbjct: 76  SGTMGNLICVLVHCDIRGSEVILGDNCHINIYENGGISTIGGVHPRQVKNNDDGTIDIDL 135

Query: 121 IEAAIRDPKWQLVYPTTRLICLENSHANCGGRCLSVEYTDKVGELAKKYGLKLHIDGARI 180
           IEAAIRDP+ +L++P+TRLICLENSHAN GGRCLSVEYTD+VGE+AKK+GLKLHIDGARI
Sbjct: 136 IEAAIRDPRGELMFPSTRLICLENSHANSGGRCLSVEYTDRVGEVAKKHGLKLHIDGARI 195

Query: 181 FNAAAALKVPVHRLVQAADSVSVCLSKGLGAPVGTVIVGSKSFIAKVLTEICFESRILRK 240
           FNA+AAL VPV RLV+AADSVSVCLSKG+GAPVG+VIVGSK+FI K        ++ LRK
Sbjct: 196 FNASAALGVPVDRLVEAADSVSVCLSKGIGAPVGSVIVGSKNFITK--------AKRLRK 247

Query: 241 TLG 243
           TLG
Sbjct: 248 TLG 250


>IMGA|Medtr1g093680.1 Aromatic amino acid beta-eliminating
           lyase/threonine aldolase; ;
           chr01_pseudomolecule_IMGAG_V3 19140353-19135194 E
           EGN_Mt090430 20090702
          Length = 421

 Score =  399 bits (1024), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 197/243 (81%), Positives = 220/243 (90%), Gaps = 8/243 (3%)

Query: 1   MVTRTVDLRSDTVTKPTEAMRAAMANAEVDDDVLGDDPNALRLQTEMARIMGKEAALFVP 60
           MVTR VDLRSDTVTKPTEAMRAAMA+AEVDDDVLG DP AL L+TEMA++MGKEAALFVP
Sbjct: 16  MVTRNVDLRSDTVTKPTEAMRAAMASAEVDDDVLGYDPTALLLETEMAKMMGKEAALFVP 75

Query: 61  SGTMGNLISVLVHCDIRGSEVILGHDSHIHIYENGGISTLGGVHPRTVKNNKDGTMDIDL 120
           SGTMGNLI VLVHCDIRGSEVILG + HI+IYENGGIST+GGVHPR VKNN DGT+DIDL
Sbjct: 76  SGTMGNLICVLVHCDIRGSEVILGDNCHINIYENGGISTIGGVHPRQVKNNDDGTIDIDL 135

Query: 121 IEAAIRDPKWQLVYPTTRLICLENSHANCGGRCLSVEYTDKVGELAKKYGLKLHIDGARI 180
           IEAAIRDP+ +L++P+TRLICLENSHAN GGRCLSVEYTD+VGE+AKK+GLKLHIDGARI
Sbjct: 136 IEAAIRDPRGELMFPSTRLICLENSHANSGGRCLSVEYTDRVGEVAKKHGLKLHIDGARI 195

Query: 181 FNAAAALKVPVHRLVQAADSVSVCLSKGLGAPVGTVIVGSKSFIAKVLTEICFESRILRK 240
           FNA+AAL VPV RLV+AADSVSVCLSKG+GAPVG+VIVGSK+FI K        ++ LRK
Sbjct: 196 FNASAALGVPVDRLVEAADSVSVCLSKGIGAPVGSVIVGSKNFITK--------AKRLRK 247

Query: 241 TLG 243
           TLG
Sbjct: 248 TLG 250


>IMGA|Medtr1g093680.3 Aromatic amino acid beta-eliminating
           lyase/threonine aldolase; ;
           chr01_pseudomolecule_IMGAG_V3 19140353-19135194 E
           EGN_Mt090430 20090702
          Length = 336

 Score =  364 bits (935), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 179/224 (79%), Positives = 202/224 (90%), Gaps = 8/224 (3%)

Query: 20  MRAAMANAEVDDDVLGDDPNALRLQTEMARIMGKEAALFVPSGTMGNLISVLVHCDIRGS 79
           MRAAMA+AEVDDDVLG DP AL L+TEMA++MGKEAALFVPSGTMGNLI VLVHCDIRGS
Sbjct: 1   MRAAMASAEVDDDVLGYDPTALLLETEMAKMMGKEAALFVPSGTMGNLICVLVHCDIRGS 60

Query: 80  EVILGHDSHIHIYENGGISTLGGVHPRTVKNNKDGTMDIDLIEAAIRDPKWQLVYPTTRL 139
           EVILG + HI+IYENGGIST+GGVHPR VKNN DGT+DIDLIEAAIRDP+ +L++P+TRL
Sbjct: 61  EVILGDNCHINIYENGGISTIGGVHPRQVKNNDDGTIDIDLIEAAIRDPRGELMFPSTRL 120

Query: 140 ICLENSHANCGGRCLSVEYTDKVGELAKKYGLKLHIDGARIFNAAAALKVPVHRLVQAAD 199
           ICLENSHAN GGRCLSVEYTD+VGE+AKK+GLKLHIDGARIFNA+AAL VPV RLV+AAD
Sbjct: 121 ICLENSHANSGGRCLSVEYTDRVGEVAKKHGLKLHIDGARIFNASAALGVPVDRLVEAAD 180

Query: 200 SVSVCLSKGLGAPVGTVIVGSKSFIAKVLTEICFESRILRKTLG 243
           SVSVCLSKG+GAPVG+VIVGSK+FI K        ++ LRKTLG
Sbjct: 181 SVSVCLSKGIGAPVGSVIVGSKNFITK--------AKRLRKTLG 216


>IMGA|Medtr1g093680.4 Aromatic amino acid beta-eliminating
           lyase/threonine aldolase; chr01_pseudomolecule_IMGAG_V3
           19140353-19138352 E EGN_Mt090430 20090702
          Length = 172

 Score =  293 bits (750), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 140/169 (82%), Positives = 157/169 (92%)

Query: 20  MRAAMANAEVDDDVLGDDPNALRLQTEMARIMGKEAALFVPSGTMGNLISVLVHCDIRGS 79
           MRAAMA+AEVDDDVLG DP AL L+TEMA++MGKEAALFVPSGTMGNLI VLVHCDIRGS
Sbjct: 1   MRAAMASAEVDDDVLGYDPTALLLETEMAKMMGKEAALFVPSGTMGNLICVLVHCDIRGS 60

Query: 80  EVILGHDSHIHIYENGGISTLGGVHPRTVKNNKDGTMDIDLIEAAIRDPKWQLVYPTTRL 139
           EVILG + HI+IYENGGIST+GGVHPR VKNN DGT+DIDLIEAAIRDP+ +L++P+TRL
Sbjct: 61  EVILGDNCHINIYENGGISTIGGVHPRQVKNNDDGTIDIDLIEAAIRDPRGELMFPSTRL 120

Query: 140 ICLENSHANCGGRCLSVEYTDKVGELAKKYGLKLHIDGARIFNAAAALK 188
           ICLENSHAN GGRCLSVEYTD+VGE+AKK+GLKLHIDGARIFNA+A  K
Sbjct: 121 ICLENSHANSGGRCLSVEYTDRVGEVAKKHGLKLHIDGARIFNASAVSK 169