Jatropha Genome Database
- JcCB0064981.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0064981.30 + phase: 0
(291 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr3g149720.1 Zinc finger, GATA-type; ZIM; CCT chr03_pseu... 282 2e-76
IMGA|Medtr4g121420.1 Zinc finger, GATA-type; ZIM; CCT chr04_pseu... 242 1e-64
IMGA|Medtr4g121280.1 Zinc finger, GATA-type; ZIM; CCT chr04_pseu... 242 1e-64
IMGA|Medtr3g149710.1 Zinc finger, GATA-type; ZIM; CCT chr03_pseu... 195 2e-50
IMGA|Medtr5g075430.1 Zinc finger, GATA-type; ZIM; CCT chr05_pseu... 191 2e-49
IMGA|Medtr3g079480.1 Zinc finger, GATA-type chr03_pseudomolecule... 84 9e-17
IMGA|Medtr3g149710.2 Zinc finger, GATA-type; ZIM; CCT chr03_pseu... 83 2e-16
IMGA|Medtr4g079920.1 Response regulator receiver; CCT chr04_pseu... 54 6e-08
IMGA|Medtr5g007680.1 Zinc finger, GATA-type chr05_pseudomolecule... 54 8e-08
IMGA|Medtr8g090430.1 Zinc finger, GATA-type chr08_pseudomolecule... 52 3e-07
IMGA|Medtr7g146130.1 Response regulator receiver; CCT chr07_pseu... 51 8e-07
IMGA|Medtr2g110110.1 Zinc finger, GATA-type chr02_pseudomolecule... 50 1e-06
IMGA|Medtr3g122650.1 CCT chr03_pseudomolecule_IMGAG_V3 30549293-... 49 2e-06
IMGA|Medtr8g015430.1 Zinc finger, GATA-type chr08_pseudomolecule... 49 3e-06
IMGA|Medtr5g021280.1 Zinc finger, GATA-type chr05_pseudomolecule... 48 4e-06
>IMGA|Medtr3g149720.1 Zinc finger, GATA-type; ZIM; CCT
chr03_pseudomolecule_IMGAG_V3 39259323-39268418 E
EGN_Mt090430 20090702
Length = 359
Score = 282 bits (721), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/192 (72%), Positives = 155/192 (80%), Gaps = 9/192 (4%)
Query: 71 RTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDIPTAVPTIEV--------IGDTPKR 122
R ELTLSFEGEVYVFP VT +KVQAVLL LGG +PT E+ +G K
Sbjct: 66 RIGELTLSFEGEVYVFPDVTHQKVQAVLLFLGGSGAQPGMPTAELPFDQNNRGMGGIGKL 125
Query: 123 SNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKESSGGSNWDSA 182
NLSRRIASLVR+REKRKERCFDKKIRYTVRKEVA+RMHR+ GQFA LK+S G S+W+SA
Sbjct: 126 PNLSRRIASLVRYREKRKERCFDKKIRYTVRKEVAERMHREKGQFAPLKQSPGSSSWNSA 185
Query: 183 QSCLQDGTPRTETVLRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLSK 242
Q QDG+P E+ LRRCQHCGV+ENNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLSK
Sbjct: 186 QGAGQDGSPNPES-LRRCQHCGVNENNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLSK 244
Query: 243 GGRNVSIDQIEP 254
GGRN+S++Q P
Sbjct: 245 GGRNISVEQSRP 256
>IMGA|Medtr4g121420.1 Zinc finger, GATA-type; ZIM; CCT
chr04_pseudomolecule_IMGAG_V3 28466807-28470502 H
EGN_Mt090430 20090702
Length = 334
Score = 242 bits (618), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 126/197 (63%), Positives = 146/197 (74%), Gaps = 19/197 (9%)
Query: 70 SRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDIPTAVPTIEV-----------IGD 118
SR SELT+SFEGEVYVFP+VTPEKVQAVLLLL G++ +VPT + D
Sbjct: 39 SRASELTISFEGEVYVFPSVTPEKVQAVLLLLDGKETRNSVPTSDFPVQQNCRDIWGKND 98
Query: 119 TPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKE--SSGG 176
+ S +SRR ASLVRFREKRKERCF+KKIRYT RKEVA+RM RKNGQFASLKE SS
Sbjct: 99 PFRNSKVSRRSASLVRFREKRKERCFEKKIRYTCRKEVAERMQRKNGQFASLKEECSSPA 158
Query: 177 SNWDSAQSCLQDGTPRTETVLRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGT 236
N D +G+P E++ RRCQHCG++ +TP MRRGPAGPRTLCNACGLMWANKGT
Sbjct: 159 ENQD-----FSNGSPFPESIERRCQHCGIAAKSTPVMRRGPAGPRTLCNACGLMWANKGT 213
Query: 237 LRDLSKGGRNVSIDQIE 253
LRDL K GR ++ +Q E
Sbjct: 214 LRDLGKAGR-IAFEQTE 229
>IMGA|Medtr4g121280.1 Zinc finger, GATA-type; ZIM; CCT
chr04_pseudomolecule_IMGAG_V3 28392374-28396069 H
EGN_Mt090430 20090702
Length = 334
Score = 242 bits (618), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 126/197 (63%), Positives = 146/197 (74%), Gaps = 19/197 (9%)
Query: 70 SRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDIPTAVPTIEV-----------IGD 118
SR SELT+SFEGEVYVFP+VTPEKVQAVLLLL G++ +VPT + D
Sbjct: 39 SRASELTISFEGEVYVFPSVTPEKVQAVLLLLDGKETRNSVPTSDFPVQQNCRDIWGKND 98
Query: 119 TPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKE--SSGG 176
+ S +SRR ASLVRFREKRKERCF+KKIRYT RKEVA+RM RKNGQFASLKE SS
Sbjct: 99 PFRNSKVSRRSASLVRFREKRKERCFEKKIRYTCRKEVAERMQRKNGQFASLKEECSSPA 158
Query: 177 SNWDSAQSCLQDGTPRTETVLRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGT 236
N D +G+P E++ RRCQHCG++ +TP MRRGPAGPRTLCNACGLMWANKGT
Sbjct: 159 ENQD-----FSNGSPFPESIERRCQHCGIAAKSTPVMRRGPAGPRTLCNACGLMWANKGT 213
Query: 237 LRDLSKGGRNVSIDQIE 253
LRDL K GR ++ +Q E
Sbjct: 214 LRDLGKAGR-IAFEQTE 229
>IMGA|Medtr3g149710.1 Zinc finger, GATA-type; ZIM; CCT
chr03_pseudomolecule_IMGAG_V3 39250520-39256158 E
EGN_Mt090430 20090702
Length = 309
Score = 195 bits (495), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/182 (55%), Positives = 126/182 (69%), Gaps = 11/182 (6%)
Query: 72 TSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDIPTAVPTIEVI-------GDTPKRSN 124
+S+LTLSF G+VYVF +VTPEKVQ+VLLLLGG ++ ++ + P R +
Sbjct: 69 SSQLTLSFRGQVYVFDSVTPEKVQSVLLLLGGCELNPGSQCLDTSPLNQRSGAEFPTRCS 128
Query: 125 LSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKESSGGSNWDSAQS 184
+R ASL+RFR+KRKER FDKK+RY VR+EVA RM R GQF S K+ GG++W S
Sbjct: 129 QPQRAASLIRFRQKRKERNFDKKVRYEVRQEVALRMQRSKGQFTSAKKQDGGNSWGSDPE 188
Query: 185 CLQDGTPRTETVLRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLSKGG 244
QD ++ET C HCG+S +TP MRRGP+GPRTLCNACGL WAN+GTLRDLS
Sbjct: 189 SGQD-VVQSET---SCTHCGISSKSTPMMRRGPSGPRTLCNACGLFWANRGTLRDLSTAR 244
Query: 245 RN 246
RN
Sbjct: 245 RN 246
>IMGA|Medtr5g075430.1 Zinc finger, GATA-type; ZIM; CCT
chr05_pseudomolecule_IMGAG_V3 27488698-27493540 E
EGN_Mt090430 20090702
Length = 286
Score = 191 bits (486), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 130/192 (67%), Gaps = 13/192 (6%)
Query: 72 TSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDIPT----AVPT----IEVIGDTPKRS 123
+ +LTLSF G+VYVF +VTP KVQ+VLLLLGG + P AVP +E + D P +
Sbjct: 72 SDQLTLSFRGQVYVFDSVTPAKVQSVLLLLGGCEQPNVGVNAVPQQSLRVESM-DFPTKY 130
Query: 124 NLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKESSGGSNWDSAQ 183
+ R ASL+RFR+KRKERCFDKK+RY VR+EVA RM RK GQF + K+ G ++ + Q
Sbjct: 131 SQLHREASLLRFRQKRKERCFDKKVRYEVRQEVALRMQRKKGQFTTSKKQDGSNSCGTDQ 190
Query: 184 SCLQDGTPRTETVLRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLSKG 243
QD +P + C HCG S +TP MRRGP+GPR+LCNACGL WAN+G LRDLSK
Sbjct: 191 DSSQDASPSEIS----CTHCGTSSKSTPMMRRGPSGPRSLCNACGLFWANRGVLRDLSKR 246
Query: 244 GRNVSIDQIEPV 255
+ +S +E V
Sbjct: 247 HQELSTVPVEQV 258
>IMGA|Medtr3g079480.1 Zinc finger, GATA-type
chr03_pseudomolecule_IMGAG_V3 18428796-18429795 E
EGN_Mt090430 20090702
Length = 107
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 152 VRKEVAQRMHRKNGQFASLKESSGGSNWDSAQSCLQDGTPRTETVLRRCQHCGVSENNTP 211
+R++ + M +KN QF SLK+ S DS S +D + R T LRRCQHC +ENNTP
Sbjct: 4 IRRDTSM-MRQKNRQFKSLKQIPDFSKCDSTLSAGRDSS-RNPTSLRRCQHCVDNENNTP 61
Query: 212 AMRRGPAGPRTLCNACGLMWANK 234
MR GPAG +TLCNACG++WA K
Sbjct: 62 LMRHGPAGEKTLCNACGIVWAKK 84
>IMGA|Medtr3g149710.2 Zinc finger, GATA-type; ZIM; CCT
chr03_pseudomolecule_IMGAG_V3 39250520-39256158 E
EGN_Mt090430 20090702
Length = 125
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 35/47 (74%), Positives = 39/47 (82%)
Query: 200 CQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLSKGGRN 246
C HCG+S +TP MRRGP+GPRTLCNACGL WAN+GTLRDLS RN
Sbjct: 16 CTHCGISSKSTPMMRRGPSGPRTLCNACGLFWANRGTLRDLSTARRN 62
>IMGA|Medtr4g079920.1 Response regulator receiver; CCT
chr04_pseudomolecule_IMGAG_V3 16245711-16238402 E
EGN_Mt090430 20090702
Length = 796
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 125 LSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQF 167
++ R A+L +FR+KRKERCFDKK+RY RK++A + R GQF
Sbjct: 718 IALREAALTKFRQKRKERCFDKKVRYHSRKKLADQRPRVRGQF 760
>IMGA|Medtr5g007680.1 Zinc finger, GATA-type
chr05_pseudomolecule_IMGAG_V3 1249447-1250894 E
EGN_Mt090430 20090702
Length = 331
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 28/38 (73%), Gaps = 2/38 (5%)
Query: 192 RTETVLRRCQHCGVSENNTPAMRRGPAGPRTLCNACGL 229
+T T+ R+C HCG +NTP R GP GP+TLCNACG+
Sbjct: 253 KTSTIGRKCHHCGA--DNTPQWRVGPDGPKTLCNACGV 288
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 28/38 (73%), Gaps = 2/38 (5%)
Query: 192 RTETVLRRCQHCGVSENNTPAMRRGPAGPRTLCNACGL 229
+T T+ R+C HCG +NTP R GP GP+TLCNACG+
Sbjct: 151 QTSTIGRQCHHCGA--DNTPLWRTGPGGPKTLCNACGV 186
>IMGA|Medtr8g090430.1 Zinc finger, GATA-type
chr08_pseudomolecule_IMGAG_V3 19743261-19742045 E
EGN_Mt090430 20090702
Length = 291
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 170 LKESSGGSNWDSAQSCLQDGTPRTETVLRRCQHCGVSENNTPAMRRGPAGPRTLCNACGL 229
L+E S + + + DG R V RRC HCGV + TP R GP GP+TLCNACG+
Sbjct: 192 LEECSKPAEKKAKRMVSPDGEARG--VPRRCSHCGVQK--TPQWRTGPGGPKTLCNACGV 247
Query: 230 MW 231
+
Sbjct: 248 RY 249
>IMGA|Medtr7g146130.1 Response regulator receiver; CCT
chr07_pseudomolecule_IMGAG_V3 34887893-34891610 E
EGN_Mt090430 20090702
Length = 636
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 30/42 (71%)
Query: 126 SRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQF 167
S+R A+L +FR KRK+RC+DKK+RY RK A+ R GQF
Sbjct: 579 SQREAALTKFRLKRKDRCYDKKVRYESRKRQAENRPRVKGQF 620
>IMGA|Medtr2g110110.1 Zinc finger, GATA-type
chr02_pseudomolecule_IMGAG_V3 25747391-25753007 E
EGN_Mt090430 20090702
Length = 312
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Query: 196 VLRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMW 231
V R+C HC V+E TP R GP GP+TLCNACG+ +
Sbjct: 214 VQRKCTHCEVTE--TPQWREGPNGPKTLCNACGVRY 247
>IMGA|Medtr3g122650.1 CCT chr03_pseudomolecule_IMGAG_V3
30549293-30547963 E EGN_Mt090430 20090702
Length = 283
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 128 RIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQF 167
R A+L +FR KRKERC++KK+RY RK++A++ R GQF
Sbjct: 229 REAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQF 268
>IMGA|Medtr8g015430.1 Zinc finger, GATA-type
chr08_pseudomolecule_IMGAG_V3 2724693-2723477 E
EGN_Mt090430 20090702
Length = 342
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 191 PRTETVLRRCQHCGVSENNTPAMRRGPAGPRTLCNACGL 229
P E R+C HCG + TP R GP GP+TLCNACG+
Sbjct: 219 PNVECSGRKCLHCGT--DKTPQWRTGPMGPKTLCNACGV 255
>IMGA|Medtr5g021280.1 Zinc finger, GATA-type
chr05_pseudomolecule_IMGAG_V3 8097943-8099652 E
EGN_Mt090430 20090702
Length = 390
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Query: 198 RRCQHCGVSENNTPAMRRGPAGPRTLCNACGL 229
RRC HCGV++ TP R GP G +TLCNACG+
Sbjct: 300 RRCSHCGVTK--TPQWRSGPLGAKTLCNACGV 329