Jatropha Genome Database

JcCB0060791.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0060791.10 - phase: 0 /partial
         (222 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g020830.1 KH, type 1 chr01_pseudomolecule_IMGAG_V3 46...   180   6e-46
IMGA|Medtr3g140110.1 KH, type 1 chr03_pseudomolecule_IMGAG_V3 36...   178   2e-45
IMGA|Medtr3g140090.1 KH, type 1 chr03_pseudomolecule_IMGAG_V3 36...   177   2e-45
IMGA|Medtr5g008480.2 KH, type 1 chr05_pseudomolecule_IMGAG_V3 16...   162   9e-41
IMGA|Medtr5g008480.1 KH, type 1 chr05_pseudomolecule_IMGAG_V3 16...   161   2e-40
IMGA|AC235664_4.1 KH, type 1 AC235664.1 14232-10980 E EGN_Mt0904...    59   2e-09
IMGA|Medtr6g013130.1 KH, type 1 chr06_pseudomolecule_IMGAG_V3 26...    57   9e-09
IMGA|Medtr6g013130.2 KH, type 1 chr06_pseudomolecule_IMGAG_V3 26...    56   1e-08

>IMGA|Medtr1g020830.1 KH, type 1 chr01_pseudomolecule_IMGAG_V3
           4692352-4699157 E EGN_Mt090430 20090702
          Length = 607

 Score =  180 bits (456), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 99/202 (49%), Positives = 132/202 (65%), Gaps = 12/202 (5%)

Query: 24  FELAKQRAQEIASRIANDADQKRPRLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYHG 83
           FEL KQRAQ++A+R+ + A    P  V                               + 
Sbjct: 51  FELIKQRAQQVAARLLSGA--AAPSDVVKRTKFDNGPPSPYDSSDLKSQYAAPMSIPSYS 108

Query: 84  SQGISKKITIPNGKVGVVIGRGGETIKYIQVQSGAKIQITKDQDADPHSLTRDVELMGSS 143
            QG SKKI IPNG+VGV+IG+GGETIKY+Q+QSGAKIQ+T+D DADP+S  R VEL G+S
Sbjct: 109 HQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPNRLVELTGTS 168

Query: 144 DQISRAEELINDVIAETDAGGSASSAVHGLDTK----QTGGEQFAMKVPNDKVGLLIGKS 199
           D I+ AE+LI +V+AE ++GG      +GL T+    Q G ++F+MK+PN+KVGL+IGK 
Sbjct: 169 DAIATAEKLIKEVLAEAESGG------NGLVTRRMTGQGGADEFSMKIPNNKVGLIIGKG 222

Query: 200 GDTIKYMQNRSGARMQIIPLHL 221
           G+TIK MQ  +GAR+Q+IPLHL
Sbjct: 223 GETIKSMQATTGARIQVIPLHL 244



 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 48/70 (68%), Gaps = 3/70 (4%)

Query: 91  ITIPNGKVGVVIGRGGETIKYIQVQSGAKIQITKDQ--DADPHSLTRDVELMGSSDQISR 148
           + IPN KVG++IG+GGETIK +Q  +GA+IQ+        D  S  R +++ G+S+QI  
Sbjct: 208 MKIPNNKVGLIIGKGGETIKSMQATTGARIQVIPLHLPPGD-TSTERTLKIEGTSEQIES 266

Query: 149 AEELINDVIA 158
           A++L++ +++
Sbjct: 267 AKQLVDSILS 276


>IMGA|Medtr3g140110.1 KH, type 1 chr03_pseudomolecule_IMGAG_V3
           36209492-36217246 E EGN_Mt090430 20090702
          Length = 605

 Score =  178 bits (451), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 86/138 (62%), Positives = 112/138 (81%), Gaps = 2/138 (1%)

Query: 83  GSQGISKKITIPNGKVGVVIGRGGETIKYIQVQSGAKIQITKDQDADPHSLTRDVELMGS 142
           GS G SKKI IPNG+VGV+IG+GGETIKY+Q+QSGAKIQ+T+D DADP+S TR VELMG+
Sbjct: 82  GSYGSSKKIEIPNGRVGVLIGKGGETIKYLQMQSGAKIQVTRDMDADPNSQTRMVELMGT 141

Query: 143 SDQISRAEELINDVIAETDAGGSASSAVHGLDTKQTGGEQFAMKVPNDKVGLLIGKSGDT 202
            D +S AE+LIN+V+AE +AG S       +   Q+GG++F M++PN+KVGL+IGK G+T
Sbjct: 142 PDAVSSAEKLINEVLAEAEAGASGGGTRRMV--AQSGGDEFVMQIPNNKVGLIIGKGGET 199

Query: 203 IKYMQNRSGARMQIIPLH 220
           IK MQ  +GAR+Q+IPLH
Sbjct: 200 IKSMQASTGARIQVIPLH 217



 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 3/69 (4%)

Query: 91  ITIPNGKVGVVIGRGGETIKYIQVQSGAKIQITK--DQDADPHSLTRDVELMGSSDQISR 148
           + IPN KVG++IG+GGETIK +Q  +GA+IQ+        D  S  R +++ G+ DQI  
Sbjct: 182 MQIPNNKVGLIIGKGGETIKSMQASTGARIQVIPLHPPPGD-TSTERTLKIDGTPDQIES 240

Query: 149 AEELINDVI 157
           A++L+N ++
Sbjct: 241 AKQLVNQIL 249


>IMGA|Medtr3g140090.1 KH, type 1 chr03_pseudomolecule_IMGAG_V3
           36200453-36204734 E EGN_Mt090430 20090702
          Length = 605

 Score =  177 bits (450), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 88/140 (62%), Positives = 113/140 (80%), Gaps = 6/140 (4%)

Query: 83  GSQGISKKITIPNGKVGVVIGRGGETIKYIQVQSGAKIQITKDQDADPHSLTRDVELMGS 142
           GS G SKKI IPNG+VGV+IG+GGETIKY+Q+QSGAKIQ+T+D DADP+S TR VELMG+
Sbjct: 82  GSYGSSKKIEIPNGRVGVLIGKGGETIKYLQMQSGAKIQVTRDMDADPNSQTRMVELMGT 141

Query: 143 SDQISRAEELINDVIAETDAGGSASSAVHGLD--TKQTGGEQFAMKVPNDKVGLLIGKSG 200
            D +S AE+LIN+V+AE +AG S    V G      Q+GG++F M++PN+KVGL+IGK G
Sbjct: 142 PDAVSSAEKLINEVLAEAEAGAS----VGGTRRMVAQSGGDEFVMQIPNNKVGLIIGKGG 197

Query: 201 DTIKYMQNRSGARMQIIPLH 220
           +TIK MQ  +GAR+Q+IPLH
Sbjct: 198 ETIKGMQASTGARIQVIPLH 217



 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 3/69 (4%)

Query: 91  ITIPNGKVGVVIGRGGETIKYIQVQSGAKIQITK--DQDADPHSLTRDVELMGSSDQISR 148
           + IPN KVG++IG+GGETIK +Q  +GA+IQ+        D  S  R +++ G+ DQI  
Sbjct: 182 MQIPNNKVGLIIGKGGETIKGMQASTGARIQVIPLHPPPGD-TSTERTLKIDGTPDQIES 240

Query: 149 AEELINDVI 157
           A++L+N ++
Sbjct: 241 AKQLVNQIL 249


>IMGA|Medtr5g008480.2 KH, type 1 chr05_pseudomolecule_IMGAG_V3
           1600090-1593614 E EGN_Mt090430 20090702
          Length = 371

 Score =  162 bits (411), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 79/141 (56%), Positives = 107/141 (75%), Gaps = 2/141 (1%)

Query: 83  GSQGISKKITIPNGKVGVVIGRGGETIKYIQVQSGAKIQITKDQDADPHSLTRDVELMGS 142
           GS   ++KI +P+ KVGV+IG+ G+TI+Y+Q  SGAKIQIT+D DADPHS TR VEL+G+
Sbjct: 181 GSDTTTRKIEVPSNKVGVLIGKSGDTIRYLQYNSGAKIQITRDADADPHSSTRPVELIGT 240

Query: 143 SDQISRAEELINDVIAETDAGGSASSAVHGLDTKQT--GGEQFAMKVPNDKVGLLIGKSG 200
            + I +AE+L+N VIAE DAGGS +    GL   Q   G +Q  ++VPN+KVGL+IGK G
Sbjct: 241 LESIDKAEKLMNAVIAEADAGGSPALVARGLSPAQAIVGSDQIQIQVPNEKVGLIIGKGG 300

Query: 201 DTIKYMQNRSGARMQIIPLHL 221
           +TIK +Q ++GAR+Q+IP HL
Sbjct: 301 ETIKSLQTKTGARIQLIPQHL 321


>IMGA|Medtr5g008480.1 KH, type 1 chr05_pseudomolecule_IMGAG_V3
           1600090-1591042 E EGN_Mt090430 20090702
          Length = 780

 Score =  161 bits (408), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 79/141 (56%), Positives = 107/141 (75%), Gaps = 2/141 (1%)

Query: 83  GSQGISKKITIPNGKVGVVIGRGGETIKYIQVQSGAKIQITKDQDADPHSLTRDVELMGS 142
           GS   ++KI +P+ KVGV+IG+ G+TI+Y+Q  SGAKIQIT+D DADPHS TR VEL+G+
Sbjct: 181 GSDTTTRKIEVPSNKVGVLIGKSGDTIRYLQYNSGAKIQITRDADADPHSSTRPVELIGT 240

Query: 143 SDQISRAEELINDVIAETDAGGSASSAVHGLDTKQT--GGEQFAMKVPNDKVGLLIGKSG 200
            + I +AE+L+N VIAE DAGGS +    GL   Q   G +Q  ++VPN+KVGL+IGK G
Sbjct: 241 LESIDKAEKLMNAVIAEADAGGSPALVARGLSPAQAIVGSDQIQIQVPNEKVGLIIGKGG 300

Query: 201 DTIKYMQNRSGARMQIIPLHL 221
           +TIK +Q ++GAR+Q+IP HL
Sbjct: 301 ETIKSLQTKTGARIQLIPQHL 321


>IMGA|AC235664_4.1 KH, type 1 AC235664.1 14232-10980 E EGN_Mt090430
           20090702
          Length = 193

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 10/130 (7%)

Query: 90  KITIPNGKVGVVIGRGGETIKYIQVQSGAKIQITKDQDADPHSLTRDVELMGSSDQISRA 149
           +  + N   G VIG+GG TI   Q QSGA+IQ++++ +  P +  R + + G+ +++ RA
Sbjct: 39  RFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNEFFPGTTDRIIMVSGAINEVLRA 98

Query: 150 EELINDVIAETDAGGSASSAVHGLDTKQTGGE-QFAMKVPNDKVGLLIGKSGDTIKYMQN 208
            ELI   +          S +H  D      + +  + VPN   G +IGK G TI+    
Sbjct: 99  VELILSKLL---------SELHSEDDNDVEPKTKVRLIVPNGSCGGIIGKGGATIRSFIE 149

Query: 209 RSGARMQIIP 218
            S A ++I P
Sbjct: 150 ESQAGIKISP 159


>IMGA|Medtr6g013130.1 KH, type 1 chr06_pseudomolecule_IMGAG_V3
           2675311-2680501 E EGN_Mt090430 20090702
          Length = 553

 Score = 56.6 bits (135), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 77/143 (53%), Gaps = 27/143 (18%)

Query: 90  KITIPNGKVGVVIGRGGETIKYIQVQSGAKIQITKDQDADPHSLTRDVELMGSSDQ---- 145
           +   P  K+G +IGRGGE +K ++V++ AKI+I    +  P    R V +  SSD+    
Sbjct: 50  RYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIG---ETVPGCDERVVTVYSSSDETNTV 106

Query: 146 ------ISRAEEL---INDVIAETDAGGSASSAVHGLDTKQTGGEQFAMK--VPNDKVGL 194
                 +S AE+    I+D +   D        +H  D ++ GG Q   K  VP+D++G 
Sbjct: 107 DDGDKLVSPAEDALFKIHDRVVAED--------LHS-DQEEEGGPQVNAKLLVPSDQIGC 157

Query: 195 LIGKSGDTIKYMQNRSGARMQII 217
           ++GK G  ++ +++ +GA+++I+
Sbjct: 158 VLGKGGQIVQNLRSETGAQIRIL 180


>IMGA|Medtr6g013130.2 KH, type 1 chr06_pseudomolecule_IMGAG_V3
           2675311-2680501 E EGN_Mt090430 20090702
          Length = 538

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 77/143 (53%), Gaps = 27/143 (18%)

Query: 90  KITIPNGKVGVVIGRGGETIKYIQVQSGAKIQITKDQDADPHSLTRDVELMGSSDQ---- 145
           +   P  K+G +IGRGGE +K ++V++ AKI+I    +  P    R V +  SSD+    
Sbjct: 50  RYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIG---ETVPGCDERVVTVYSSSDETNTV 106

Query: 146 ------ISRAEEL---INDVIAETDAGGSASSAVHGLDTKQTGGEQFAMK--VPNDKVGL 194
                 +S AE+    I+D +   D        +H  D ++ GG Q   K  VP+D++G 
Sbjct: 107 DDGDKLVSPAEDALFKIHDRVVAED--------LHS-DQEEEGGPQVNAKLLVPSDQIGC 157

Query: 195 LIGKSGDTIKYMQNRSGARMQII 217
           ++GK G  ++ +++ +GA+++I+
Sbjct: 158 VLGKGGQIVQNLRSETGAQIRIL 180