Jatropha Genome Database

JcCB0060481.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0060481.10 + phase: 0 /partial
         (358 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g059590.1 Sucrose phosphatase, plant and cyanobacteri...   478   e-135

>IMGA|Medtr1g059590.1 Sucrose phosphatase, plant and cyanobacteria
           chr01_pseudomolecule_IMGAG_V3 11667375-11670944 F
           EGN_Mt090430 20090702
          Length = 321

 Score =  478 bits (1230), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 225/316 (71%), Positives = 266/316 (84%), Gaps = 1/316 (0%)

Query: 1   MDRLDGPASLMIVSDLDFTMVDHRDPENLSLLRFNALWEAYYRQHSLLVFSTGRSPTIYK 60
           MDRL G A+LMIVSDLD+TMVDH DPENL+LLRFNALWEAYYR +SLLVFSTGRSPTIYK
Sbjct: 1   MDRLIGSANLMIVSDLDYTMVDHDDPENLALLRFNALWEAYYRHNSLLVFSTGRSPTIYK 60

Query: 61  QLRNEKPLLTPDITITSVGTEIMYGESMVRDNGWEQYLNQQWNREIVTEETAKFPELTPQ 120
           +LR +KPLLTPDITI SVGTEI YGESMV D+GW+QYL+ +W+R+IV EETAKFPEL  Q
Sbjct: 61  ELRKQKPLLTPDITIMSVGTEITYGESMVPDDGWKQYLDHKWDRDIVIEETAKFPELVSQ 120

Query: 121 ADTEQRPHKVSFFVDKVKALKIVKTLSELLEKRGLDVKVIYSNGTALDVLPKRAGKGQAL 180
           ++TEQRPHKVSF ++K KA K+++ LS+ LE RGLDVK+IYSN  ALDVLP+ AGKGQAL
Sbjct: 121 SETEQRPHKVSFNLEKGKASKVMQALSKCLENRGLDVKIIYSNSIALDVLPQAAGKGQAL 180

Query: 181 LYLFKKFEANGKMPVNTLVCGDSGNDAELFNINEVYGVMVSNAQEELLQWYAENAKNNPN 240
            +L  K +A G  P+NTLVCGDSGNDAELF++ EVYGVMV NAQEEL++WYAENA++N  
Sbjct: 181 SFLLGKLKAGGIRPLNTLVCGDSGNDAELFSVPEVYGVMVGNAQEELVEWYAENARDNAQ 240

Query: 241 IIHATERCAAGIIQALGGFRLGPNVSPRDIRDFQKCKVEIFSPGHEVVKFYLSYERWRRA 300
           IIHATERCAAGI+QA+G F LGPN+SPRD+RD     ++I SP HEVV FYL YERW R 
Sbjct: 241 IIHATERCAAGIMQAIGNFTLGPNMSPRDVRD-STLNIKILSPSHEVVMFYLLYERWLRG 299

Query: 301 EIEKYNDYLQNLKLVF 316
           E++    Y+QN+K VF
Sbjct: 300 EVDNSEQYIQNIKSVF 315