Jatropha Genome Database

JcCB0060211.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0060211.10 + phase: 0 /partial
         (329 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g110030.1 Aspartate/other aminotransferase; ; chr04_p...   313   7e-86
IMGA|Medtr4g110010.1 Aspartate/other aminotransferase; chr04_pse...   294   5e-80
IMGA|Medtr4g012240.1 Aspartate/other aminotransferase; chr04_pse...    60   2e-09

>IMGA|Medtr4g110030.1 Aspartate/other aminotransferase; ;
           chr04_pseudomolecule_IMGAG_V3 24784975-24779539 E
           EGN_Mt090430 20090702
          Length = 424

 Score =  313 bits (802), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 147/314 (46%), Positives = 208/314 (66%), Gaps = 1/314 (0%)

Query: 15  SPAITENRVTTVQCVAGTGALRIGAEFLAKHYHQNIVYLPQPTYGNHPNFFLAVGHTLKT 74
           S  I + R+  VQ ++GTGA R+ A F  + +    +Y+P PT+ NH N +   G  +KT
Sbjct: 111 SEFIKDKRIAAVQALSGTGACRLFAVFQQRFHPNTQIYIPVPTWSNHHNIWRDAGVPIKT 170

Query: 75  YRYYDPATHGLDFQGLLEDLSSAPSGAIVLLQACGHNPTGVDPTLEQWEHIRQLMRLKGL 134
           YRYY P + GLDF GL++D+ +AP G+  LL AC HNPTGVDP+ EQW  I    + KG 
Sbjct: 171 YRYYHPESKGLDFSGLMDDIKNAPDGSFFLLHACAHNPTGVDPSEEQWREISSQFKAKGH 230

Query: 135 LPFFDCAYQGFVSGNLDMDAQSIRVFVADGGECLVAQSYSKIMGIYADRVGALSIVCKTA 194
            P FD AYQGF SGN + D ++IR+FV DG    +AQSY+K MG+Y  RVG LS++C+  
Sbjct: 231 FPLFDMAYQGFASGNPERDVKAIRIFVDDGHLLGLAQSYAKNMGLYGQRVGCLSLLCEDQ 290

Query: 195 DVASRVNSQLKLVIRPSYSNPPIHGAAVVATILNDREMVTEWTVELKAMTNRIINLRRQL 254
             A  V SQL+L+ RP YSNPP+HGA VV+T+L+D ++   W  E+K M +RII +R  L
Sbjct: 291 KQAVAVKSQLQLISRPMYSNPPLHGALVVSTVLSDPDLKKLWLKEVKVMADRIIGMRTTL 350

Query: 255 FDALCDKGTPGDWSHVTRQVGMYAFSGLNDEQVAFIMKDYHIYMSPDGRINMTGLSTKTI 314
            + L + G+P  W+H+T Q+GM+ +SG+  EQV  +  ++HIYM+ +GRI+M GL+T  +
Sbjct: 351 RENLENLGSPLPWNHITNQIGMFCYSGMTPEQVDRLTSEFHIYMTRNGRISMAGLNTGNV 410

Query: 315 PYFVEAIHAAVTRT 328
            Y   AI+  VT++
Sbjct: 411 GYVANAIN-EVTKS 423


>IMGA|Medtr4g110010.1 Aspartate/other aminotransferase;
           chr04_pseudomolecule_IMGAG_V3 24776278-24772701 E
           EGN_Mt090430 20090702
          Length = 414

 Score =  294 bits (752), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 141/314 (44%), Positives = 201/314 (64%), Gaps = 7/314 (2%)

Query: 15  SPAITENRVTTVQCVAGTGALRIGAEFLAKHYHQNIVYLPQPTYGNHPNFFLAVGHTLKT 74
           S  I + R+  VQ ++GTGA R+ A F  + + +  +Y+P  T+          G  +KT
Sbjct: 107 SEFIKDKRIAAVQALSGTGACRLFAAFQQRFHPKTQIYMPVLTWAKD------AGVPIKT 160

Query: 75  YRYYDPATHGLDFQGLLEDLSSAPSGAIVLLQACGHNPTGVDPTLEQWEHIRQLMRLKGL 134
           +RYY P + GLDF GL+ D+ +AP G+  LL AC HNPTGVDP+ EQW  I    + KG 
Sbjct: 161 FRYYHPESKGLDFPGLMVDIKNAPDGSFFLLHACAHNPTGVDPSEEQWREISSQFKAKGH 220

Query: 135 LPFFDCAYQGFVSGNLDMDAQSIRVFVADGGECLVAQSYSKIMGIYADRVGALSIVCKTA 194
            P FD AYQGF SG+ + DA++IR+F+ D     VAQSY+K MG+Y  RVG LS++C+  
Sbjct: 221 FPLFDMAYQGFASGDPERDAKAIRIFLNDSHLIGVAQSYAKNMGLYGQRVGCLSLLCENE 280

Query: 195 DVASRVNSQLKLVIRPSYSNPPIHGAAVVATILNDREMVTEWTVELKAMTNRIINLRRQL 254
             A  V SQL+L+ RP YSNPP+HGA V++T+L D E+   W  E+K M +RII +R  L
Sbjct: 281 KQAVAVKSQLQLIARPMYSNPPLHGALVISTVLGDPELKKLWLKEVKVMADRIIGMRTAL 340

Query: 255 FDALCDKGTPGDWSHVTRQVGMYAFSGLNDEQVAFIMKDYHIYMSPDGRINMTGLSTKTI 314
            + L + G+P  W+H+T Q+GM+ +SG+  EQV  +  ++HIYM+  GRI+M GL+T  +
Sbjct: 341 RENLENLGSPLPWNHITNQIGMFCYSGMTPEQVDRLTNEFHIYMTRSGRISMAGLNTSNV 400

Query: 315 PYFVEAIHAAVTRT 328
            Y   AI+  VT++
Sbjct: 401 GYVANAIN-EVTKS 413


>IMGA|Medtr4g012240.1 Aspartate/other aminotransferase;
           chr04_pseudomolecule_IMGAG_V3 2030950-2028080 E
           EGN_Mt090430 20090702
          Length = 81

 Score = 59.7 bits (143), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/53 (47%), Positives = 34/53 (64%)

Query: 200 VNSQLKLVIRPSYSNPPIHGAAVVATILNDREMVTEWTVELKAMTNRIINLRR 252
           V SQLK + RP YSNPP+HGA +VA I+    +  EW  E++ M  RI  ++R
Sbjct: 24  VKSQLKRLARPMYSNPPVHGARIVANIVGTPALFDEWKAEMEMMAGRIKTVKR 76