Jatropha Genome Database
- JcCB0060001.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0060001.10 + phase: 0
(407 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr5g027690.1 Phosphoribulokinase/uridine kinase chr05_ps... 714 0.0
IMGA|Medtr3g080300.2 Phosphoribosyltransferase; Phosphoribulokin... 68 7e-12
IMGA|Medtr3g080300.1 Phosphoribosyltransferase; Phosphoribulokin... 68 8e-12
IMGA|Medtr8g109340.1 Phosphoribosyltransferase; Excinuclease ABC... 67 1e-11
IMGA|Medtr5g104300.1 Phosphoribulokinase/uridine kinase chr05_ps... 65 5e-11
IMGA|Medtr6g022880.1 Phosphoribosyltransferase; Phosphoribulokin... 65 6e-11
IMGA|Medtr8g115410.1 Phosphoribulokinase/uridine kinase; Adenyla... 60 3e-09
>IMGA|Medtr5g027690.1 Phosphoribulokinase/uridine kinase
chr05_pseudomolecule_IMGAG_V3 11341541-11338022 E
EGN_Mt090430 20090702
Length = 411
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/408 (84%), Positives = 369/408 (90%), Gaps = 3/408 (0%)
Query: 1 MAICTVYTTQSLNSTCTISTPGKTHLGFNQKHVVFLNSS---CGKRNXXXXXXXXXXXXX 57
MA CTVY+TQ L + +I T KTH+GFNQK VVF ++ +R
Sbjct: 1 MAACTVYSTQPLRTNISIPTSSKTHVGFNQKQVVFYTTTKKSSNRRTNSNNRRYLITCGA 60
Query: 58 XXXETVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYH 117
+T+VIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYH
Sbjct: 61 GDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYH 120
Query: 118 SLDRTGRKEKGVTALDPRANDFDLMYEQVKAIKEGIPVEKPIYNHVTGLLDPPELIKPPK 177
SLDRTGRKEKGVTALDPRANDFDLMYEQVKAIKEG+ V+KPIYNHVTGLLDPPELIKPPK
Sbjct: 121 SLDRTGRKEKGVTALDPRANDFDLMYEQVKAIKEGVSVQKPIYNHVTGLLDPPELIKPPK 180
Query: 178 ILVIEGLHPMYDQRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKP 237
ILVIEGLHPMYD RVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKP
Sbjct: 181 ILVIEGLHPMYDSRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKP 240
Query: 238 DFDAYIDPQKQYADAVIEVLPTQLIPDDNEGKVLRVRLIMKEGVKYFSPVYLFDEGSTIS 297
DF+AYIDPQKQYADAVIEVLPTQLIPDDNEGK+LRVRLI KEGVKYFSPVYLFD+GSTIS
Sbjct: 241 DFEAYIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKYFSPVYLFDDGSTIS 300
Query: 298 WIPCGRKLTCSYPGIKFAYAPDTYFGHEVSVLEMDGQFDRLDELIYVESHLSNISTKFYG 357
WIPCGRKLTCSYPGIKF+Y P+TY G+EVSV+EMDGQFDRLDELIYVESHLSN+S+KFYG
Sbjct: 301 WIPCGRKLTCSYPGIKFSYGPETYKGNEVSVVEMDGQFDRLDELIYVESHLSNLSSKFYG 360
Query: 358 EVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIVASKAKTPVEA 405
EVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDL+EQIVAS+A+TPV A
Sbjct: 361 EVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLFEQIVASRAETPVGA 408
>IMGA|Medtr3g080300.2 Phosphoribosyltransferase;
Phosphoribulokinase/uridine kinase
chr03_pseudomolecule_IMGAG_V3 18843227-18850010 E
EGN_Mt090430 20090702
Length = 466
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 4/177 (2%)
Query: 82 LTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDD--YHSLDRTGRKEKGVTALD-PRAND 138
+ V GGAA K + D V+ D Y++L R D P A D
Sbjct: 40 VIGVAGGAASGKKTVCDMIVQQLHDQRVVLVNQDSFYNNLTEEERARVQDYNFDHPDAFD 99
Query: 139 FDLMYEQVKAIKEGIPVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDQRVRDLLDF 198
+ + + +K G V+ P Y+ + D + P ++++EG+ +D RVR+L++
Sbjct: 100 TEELLRVMDKLKHGEAVDIPKYDFKSYKSDALRRVNPSDVIILEGILVFHDPRVRELMNM 159
Query: 199 SIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEA-RKPDFDAYIDPQKQYADAVI 254
I++D +V+ A +I+RD +E+ + +I KP FD +I P K+YAD +I
Sbjct: 160 KIFVDTDADVRLARRIRRDTSEKDRDIGAILDQYSKFVKPAFDDFILPTKKYADIII 216
>IMGA|Medtr3g080300.1 Phosphoribosyltransferase;
Phosphoribulokinase/uridine kinase
chr03_pseudomolecule_IMGAG_V3 18843227-18850010 E
EGN_Mt090430 20090702
Length = 476
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 1/122 (0%)
Query: 134 PRANDFDLMYEQVKAIKEGIPVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDQRVR 193
P A D + + + +K G V+ P Y+ + D + P ++++EG+ +D RVR
Sbjct: 105 PDAFDTEELLRVMDKLKHGEAVDIPKYDFKSYKSDALRRVNPSDVIILEGILVFHDPRVR 164
Query: 194 DLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEA-RKPDFDAYIDPQKQYADA 252
+L++ I++D +V+ A +I+RD +E+ + +I KP FD +I P K+YAD
Sbjct: 165 ELMNMKIFVDTDADVRLARRIRRDTSEKDRDIGAILDQYSKFVKPAFDDFILPTKKYADI 224
Query: 253 VI 254
+I
Sbjct: 225 II 226
>IMGA|Medtr8g109340.1 Phosphoribosyltransferase; Excinuclease ABC, C
subunit, C-terminal; Phosphoribulokinase/uridine kinase
chr08_pseudomolecule_IMGAG_V3 24500586-24495254 E
EGN_Mt090430 20090702
Length = 458
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 13/131 (9%)
Query: 134 PRANDFDLMYEQVKAIKEGIPVEKPIYN---HVTGLLDPPELIKPPKILVIEGLHPMYDQ 190
P A D + + E + +K G V+ P+Y+ H D + +++++EG+ ++
Sbjct: 90 PDAFDTEQLVETLIKLKSGQSVQVPVYDFKLHQRAS-DRYRQVNASEVIILEGILVFHEP 148
Query: 191 RVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEAR-------KPDFDAYI 243
RVRD+++ I++D +V+ +I+RD ERG + S+ +AR KP FD +I
Sbjct: 149 RVRDMMNMKIFVDADPDVRLGRRIRRDTVERGRDVHSVLE--QARFVYAKFVKPAFDDFI 206
Query: 244 DPQKQYADAVI 254
P K+YAD +I
Sbjct: 207 LPSKKYADIII 217
>IMGA|Medtr5g104300.1 Phosphoribulokinase/uridine kinase
chr05_pseudomolecule_IMGAG_V3 41812941-41819472 E
EGN_Mt090430 20090702
Length = 479
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Query: 134 PRANDFDLMYEQVKAIKEGIPVEKPIYNHVTGLLD--PPELIKPPKILVIEGLHPMYDQR 191
P A D + + + +K V+ P Y+ D P + P ++++EG+ +D R
Sbjct: 105 PEAFDSERLLSVMDKLKHSQAVDIPKYDFKCYKNDVFPARRVNPADVIILEGILVFHDPR 164
Query: 192 VRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEA-RKPDFDAYIDPQKQYA 250
VR L++ I++D +V+ A +I+RD A+ ++E++ KP FD +I P K+YA
Sbjct: 165 VRALMNMKIFVDTDADVRLARRIKRDTADNARNIEAVLDQYSKFVKPAFDDFILPTKKYA 224
Query: 251 DAVI 254
D +I
Sbjct: 225 DIII 228
>IMGA|Medtr6g022880.1 Phosphoribosyltransferase;
Phosphoribulokinase/uridine kinase
chr06_pseudomolecule_IMGAG_V3 5229442-5233044 H
EGN_Mt090430 20090702
Length = 324
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 172 LIKPPKILVIEGLHPMYDQRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESI-KA 230
++ P I+V+EG+ ++D RVR+LL+ I++D ++V+ +IQR ERG +++++
Sbjct: 1 MVHPADIIVLEGILVLHDSRVRNLLNMKIFVDEDSDVRLTRRIQRLAIERGRNIQNVLDQ 60
Query: 231 SIEARKPDFDAYIDPQKQYADAVI 254
KP F+ ++ P K+YAD +I
Sbjct: 61 YCRFVKPSFEDFVLPTKKYADIII 84
>IMGA|Medtr8g115410.1 Phosphoribulokinase/uridine kinase; Adenylate
cyclase chr08_pseudomolecule_IMGAG_V3 25911150-25916455
E EGN_Mt090430 20090702
Length = 576
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 31/193 (16%)
Query: 63 VVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRT 122
+++G+A SG GK+ F ++ S A VI +D+Y+ R
Sbjct: 71 ILVGVAGPSGAGKTVFTDKVFSFMPSIA-------------------VITMDNYNDSSRI 111
Query: 123 --GRKEKGVTALDPRANDFDLMYEQVKAIKEGIPVEKPIYNHVTGLLDPPELIKPP--KI 178
G + DPR D+D + + ++ +K G P + PIY+ + I+ P +I
Sbjct: 112 IDGNFD------DPRLTDYDTLLKNIQDLKSGKPAQVPIYDFKSSSRIGYRTIEVPSSRI 165
Query: 179 LVIEGLHPMYDQRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASI-EARKP 237
++IEG++ + +++R LLD + + ++ RD+ G E I I E P
Sbjct: 166 VIIEGIYAL-SEKLRPLLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYP 224
Query: 238 DFDAYIDPQKQYA 250
+ A+I+P Q A
Sbjct: 225 MYKAFIEPDLQTA 237