Jatropha Genome Database

JcCB0059761.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0059761.10 - phase: 0 
         (411 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC233659_17.1 UPF0533 protein, related AC233659.1 71731-778...   586   e-168
IMGA|Medtr2g032940.1 Protein of unknown function DUF974 chr02_ps...    52   5e-07

>IMGA|AC233659_17.1 UPF0533 protein, related AC233659.1 71731-77893
           E EGN_Mt090430 20090702
          Length = 437

 Score =  586 bits (1511), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 300/427 (70%), Positives = 334/427 (78%), Gaps = 33/427 (7%)

Query: 8   HSLAFRVMRLCKPSFHVDAPLRVDPADLIVGEDIFDDPIAASRLPPLIDGQVSNLTDTSD 67
           HS+AFRVMRLC+PSF+VD PLR+DP DL VGED FDDP A S            +   SD
Sbjct: 14  HSVAFRVMRLCRPSFNVDPPLRIDPDDLFVGEDHFDDPSAPS--------SSDLIAPDSD 65

Query: 68  LTYRTRFLLQHPSDSFGLTGLLVLPQAFGAIYLGETFCSYISINNSSNFEVRDVIIKAEI 127
             YR RFLLQH SDS GL+GLLVLPQ+FGAIYLGETFCSYISINNSSNFEVR+VIIKAEI
Sbjct: 66  PNYRNRFLLQHFSDSMGLSGLLVLPQSFGAIYLGETFCSYISINNSSNFEVREVIIKAEI 125

Query: 128 QTERQRILLLDTSKTPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGERKYLPQ 187
           QTERQRILLLDTSK+PVETIRAGGRYDFIVEHDVKELG HTLVCTALYNDGDGERKYLPQ
Sbjct: 126 QTERQRILLLDTSKSPVETIRAGGRYDFIVEHDVKELGPHTLVCTALYNDGDGERKYLPQ 185

Query: 188 FFKFIVANPLSVRT-----KETTYLEACIENHTKTSLYMDQVEFEPAQYWNAQILKADDN 242
           FFKFIVANPLSVRT     KETT+LEACIENHTK++L+MDQV+FEPAQ+++A IL+ D  
Sbjct: 186 FFKFIVANPLSVRTKVRVIKETTFLEACIENHTKSNLFMDQVDFEPAQHYSATILRGDGP 245

Query: 243 QSEKDSHTRETFKTPILIRSGGGIRNYLYQLRFSSNGSAQS-----NVLGKLQITWRTNL 297
            +EKD+  RETFK PILIRSGGGI NYLYQL+ S + SAQ+     NVLGKLQITWRTNL
Sbjct: 246 HTEKDNTARETFKPPILIRSGGGIYNYLYQLKSSLDDSAQTKVEGNNVLGKLQITWRTNL 305

Query: 298 GEPGRLQTQQILGNPITQKXXXXXXXXXXXXINLDKPFSVHLKLKNHTERELGPFEVWLS 357
           GEPGRLQTQQILG P T+K            INL +PF++ L L N TERELGPF+V +S
Sbjct: 306 GEPGRLQTQQILGTPTTKKEIELQVVEVPSIINLQRPFTLKLNLTNLTERELGPFKVSVS 365

Query: 358 QNDSLDEKAVMINGLQS---------------LNLIAIKLGVQKITGITVFDKKEKKTYD 402
           QN S  E AVMINGLQS               LNLIA K G+QKITGITVFD +  K+Y+
Sbjct: 366 QNGSSGETAVMINGLQSMVLSQIEALGSTNIHLNLIATKPGIQKITGITVFDTRGMKSYE 425

Query: 403 PLPDLEV 409
           PLPDLE+
Sbjct: 426 PLPDLEI 432


>IMGA|Medtr2g032940.1 Protein of unknown function DUF974
           chr02_pseudomolecule_IMGAG_V3 8857606-8857260 F
           EGN_Mt090430 20090702
          Length = 55

 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 28/34 (82%)

Query: 376 NLIAIKLGVQKITGITVFDKKEKKTYDPLPDLEV 409
           NLIA K G+QKITGITVF  +  K+Y+PLPDLEV
Sbjct: 3   NLIATKPGIQKITGITVFATRGMKSYEPLPDLEV 36