Jatropha Genome Database

JcCB0059731.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0059731.10 + phase: 0 /partial
         (252 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC233656_29.1 Mannose-6-phosphate isomerase, type I AC23365...   264   3e-71

>IMGA|AC233656_29.1 Mannose-6-phosphate isomerase, type I AC233656.1
           117027-112130 E EGN_Mt090430 20090702
          Length = 333

 Score =  264 bits (674), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 128/242 (52%), Positives = 170/242 (70%), Gaps = 1/242 (0%)

Query: 11  ELKDVLRNVPELEELVGGSNAEQFLYFSEQDRDAKVKAILEYIFSQLLSSSREKIFEVIS 70
           ELK V+  VPE+  LVG SNA   L  S+Q+ + KVK +L+ +F+ L+S+S+E + + ++
Sbjct: 70  ELKAVIHTVPEVVNLVGASNANLVLETSDQNEE-KVKPVLQAVFTHLMSASKEIVTDAVN 128

Query: 71  KIKRRLHLEMQERELTDKEQLVLRLESQYPADTGVIAAFLLNYVKLNRGEALYLGANEPH 130
           ++  RLH E + R LT+KE LVLRLE+QYP+D GVIAAF LN+VKLN GEAL+LGANEPH
Sbjct: 129 RLINRLHEESEMRHLTEKELLVLRLENQYPSDIGVIAAFFLNHVKLNPGEALFLGANEPH 188

Query: 131 AYIAGECIECMANSDNVVRVGLTSKRRDIQTLLAMLEYRQGFPEILQGVSLNPYTTRYLP 190
           AY++GECIECMA SDNVVR GLT K  D+ TL +ML Y+QGFPEIL+GVS+NPY  +Y+P
Sbjct: 189 AYLSGECIECMATSDNVVRAGLTPKFIDVPTLCSMLTYKQGFPEILRGVSMNPYVNKYIP 248

Query: 191 PLDEFEVDLSVIPRAAXXXXXXXXXXXXLLFIMGRGTIAAGFSKDGKAGEGEVLFVPACT 250
           P +EFE+D  ++P+               L   G G++  G  K  +  EG+ LF PA T
Sbjct: 249 PFEEFEIDRCILPKGQTVVFPAVPGPSIFLVTAGEGSMNTGSPKVYEITEGDALFAPAYT 308

Query: 251 EI 252
           EI
Sbjct: 309 EI 310