Jatropha Genome Database

JcCB0058191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0058191.10 + phase: 0 /partial
         (126 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g086920.1 Peptidoglycan-binding domain 1 chr01_pseudo...   162   3e-41
IMGA|Medtr1g086830.1 Peptidoglycan-binding domain 1 chr01_pseudo...   162   3e-41

>IMGA|Medtr1g086920.1 Peptidoglycan-binding domain 1
           chr01_pseudomolecule_IMGAG_V3 17362596-17359531 E
           EGN_Mt090430 20090702
          Length = 392

 Score =  162 bits (411), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 84/126 (66%), Positives = 93/126 (73%), Gaps = 2/126 (1%)

Query: 1   EGANGAAVTSVTEISEKQHKVVKEEGATEVEVSQHRVFLLGENRWEEPSRLIGRDKHVHV 60
           E  NGAAV SVTEISE Q KVV E    E E S  RVFLLGENRWEEPSRL  + + V  
Sbjct: 269 EVENGAAVASVTEISEVQQKVVGEVDQ-ETEASHPRVFLLGENRWEEPSRLSTKVR-VDR 326

Query: 61  SKTKETTSKCLSCRGEGRLLCTECDGTGEPNIEPQFLEWVDEGTKCPYCEGLGYTICDVC 120
            K K+ T +CL C G G LLCTECDG+GEPNIEPQF+EWV E TKCPYCEGLG+  CD+C
Sbjct: 327 GKNKDGTMRCLQCSGLGVLLCTECDGSGEPNIEPQFMEWVGEDTKCPYCEGLGHITCDLC 386

Query: 121 EGKTMI 126
            GKTM+
Sbjct: 387 RGKTMV 392


>IMGA|Medtr1g086830.1 Peptidoglycan-binding domain 1
           chr01_pseudomolecule_IMGAG_V3 17313447-17310259 E
           EGN_Mt090430 20090702
          Length = 392

 Score =  162 bits (411), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 84/126 (66%), Positives = 93/126 (73%), Gaps = 2/126 (1%)

Query: 1   EGANGAAVTSVTEISEKQHKVVKEEGATEVEVSQHRVFLLGENRWEEPSRLIGRDKHVHV 60
           E  NGAAV SVTEISE Q KVV E    E E S  RVFLLGENRWEEPSRL  + + V  
Sbjct: 269 EVENGAAVASVTEISEVQQKVVGEVDQ-ETEASHPRVFLLGENRWEEPSRLSTKVR-VDR 326

Query: 61  SKTKETTSKCLSCRGEGRLLCTECDGTGEPNIEPQFLEWVDEGTKCPYCEGLGYTICDVC 120
            K K+ T +CL C G G LLCTECDG+GEPNIEPQF+EWV E TKCPYCEGLG+  CD+C
Sbjct: 327 GKNKDGTMRCLQCSGLGVLLCTECDGSGEPNIEPQFMEWVGEDTKCPYCEGLGHITCDLC 386

Query: 121 EGKTMI 126
            GKTM+
Sbjct: 387 RGKTMV 392