Jatropha Genome Database

JcCB0056061.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0056061.10 - phase: 0 
         (71 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g089410.1 Ras GTPase chr08_pseudomolecule_IMGAG_V3 19...    70   3e-13
IMGA|Medtr5g022500.1 Ras GTPase chr05_pseudomolecule_IMGAG_V3 87...    70   3e-13
IMGA|Medtr4g098540.1 Ras GTPase chr04_pseudomolecule_IMGAG_V3 21...    69   7e-13
IMGA|Medtr2g132410.1 Ras GTPase chr02_pseudomolecule_IMGAG_V3 32...    69   8e-13
IMGA|Medtr2g132410.2 Ras GTPase chr02_pseudomolecule_IMGAG_V3 32...    67   2e-12
IMGA|Medtr6g099230.1 Ras small GTPase, Rab type chr06_pseudomole...    64   1e-11

>IMGA|Medtr8g089410.1 Ras GTPase chr08_pseudomolecule_IMGAG_V3
          19209541-19213679 F EGN_Mt090430 20090702
          Length = 197

 Score = 70.1 bits (170), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 32/33 (96%), Positives = 33/33 (100%)

Query: 1  MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPT 33
          MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPT
Sbjct: 1  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT 33


>IMGA|Medtr5g022500.1 Ras GTPase chr05_pseudomolecule_IMGAG_V3
          8775550-8778414 E EGN_Mt090430 20090702
          Length = 197

 Score = 69.7 bits (169), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 32/33 (96%), Positives = 33/33 (100%)

Query: 1  MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPT 33
          MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPT
Sbjct: 1  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT 33


>IMGA|Medtr4g098540.1 Ras GTPase chr04_pseudomolecule_IMGAG_V3
          21246015-21242846 F EGN_Mt090430 20090702
          Length = 197

 Score = 68.6 bits (166), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 31/33 (93%), Positives = 32/33 (96%)

Query: 1  MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPT 33
          MS SRFIKCVTVGDGAVGKTC+LISYTSNTFPT
Sbjct: 1  MSGSRFIKCVTVGDGAVGKTCLLISYTSNTFPT 33


>IMGA|Medtr2g132410.1 Ras GTPase chr02_pseudomolecule_IMGAG_V3
          32003647-32002013 E EGN_Mt090430 20090702
          Length = 196

 Score = 68.6 bits (166), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 31/33 (93%), Positives = 32/33 (96%)

Query: 1  MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPT 33
          MS +RFIKCVTVGDGAVGKTCMLISYTSNTFPT
Sbjct: 1  MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPT 33


>IMGA|Medtr2g132410.2 Ras GTPase chr02_pseudomolecule_IMGAG_V3
          32003647-32002723 E EGN_Mt090430 20090702
          Length = 67

 Score = 67.0 bits (162), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/33 (93%), Positives = 32/33 (96%)

Query: 1  MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPT 33
          MS +RFIKCVTVGDGAVGKTCMLISYTSNTFPT
Sbjct: 1  MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPT 33


>IMGA|Medtr6g099230.1 Ras small GTPase, Rab type
          chr06_pseudomolecule_IMGAG_V3 21851607-21855202 F
          EGN_Mt090430 20090702
          Length = 209

 Score = 64.3 bits (155), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/33 (90%), Positives = 31/33 (93%)

Query: 1  MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPT 33
          MSAS+FIKCVTVGDGAVGKTCMLI YTSN FPT
Sbjct: 1  MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPT 33