Jatropha Genome Database

JcCB0056041.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0056041.10 + phase: 1 /partial
         (318 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g015110.1 Branched-chain amino acid aminotransferase ...   398   e-111
IMGA|Medtr4g122070.1 Branched-chain amino acid aminotransferase ...   335   1e-92
IMGA|Medtr4g122080.1 Branched-chain amino acid aminotransferase ...   321   3e-88
IMGA|Medtr1g099060.1 Aminotransferase, class IV chr01_pseudomole...    67   1e-11
IMGA|Medtr1g099880.1 Aminotransferase, class IV chr01_pseudomole...    60   1e-09

>IMGA|Medtr5g015110.1 Branched-chain amino acid aminotransferase II
           chr05_pseudomolecule_IMGAG_V3 4952162-4959265 F
           EGN_Mt090430 20090702
          Length = 408

 Score =  398 bits (1022), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 189/310 (60%), Positives = 233/310 (75%), Gaps = 4/310 (1%)

Query: 9   ATTLKVTPSDTQSKTSELGNDVSSLSWDNLGFDHVPTDYMFVMKCCGGDKFSDGELKTFG 68
           +  L+ + S + S+  EL +    + WDNLGF   PTDYM+ MKC  G  FS GELK FG
Sbjct: 56  SNALRPSASVSASEAIELAD----IDWDNLGFGLQPTDYMYFMKCDQGGTFSKGELKRFG 111

Query: 69  EIELNPFSSVLNYGQGIIENMKAYKKDDGSILLFRPEANALRMTMGADRMCMPAPTFDQF 128
            IELNP + VLNYGQG+ E +KAY+KDDG+ILLFRPE NALRM  GA+RMCMP+P+ +QF
Sbjct: 112 NIELNPSAGVLNYGQGLFEGLKAYRKDDGNILLFRPEENALRMKTGAERMCMPSPSVEQF 171

Query: 129 LEAVKVTVSANRRWIPPPNKGFLHIRPLLIGSGPVLILTPSPEFTFLIYVTPVRNYFESG 188
           +EAVK TV AN+RWIPP  KG L+IRPLL+GSG VL L P+PE+TFLIYV+PV NYF+ G
Sbjct: 172 VEAVKDTVLANKRWIPPQGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEG 231

Query: 189 VEPINLVVEKEAHRAVPGGVGSIKAIGNYAMIVXXXXXXXXNGFHGVLYLDAVHNKYLEE 248
           + PINL+VE E HRA PGG G +K IGNYA ++         G+  VLYLD VH +YLEE
Sbjct: 232 LAPINLIVESELHRATPGGTGGVKTIGNYAAVLKAQSAAKAKGYSDVLYLDCVHKRYLEE 291

Query: 249 VSAANIFVVKDKTICTPALRGTILPGITRESVIDIARNLRFQVEEGRVSVEELFNADEVF 308
           VS+ NIFVVK   I TP+++GTILPGITR+S+ID+AR+  F+VEE  V+V+EL  ADEVF
Sbjct: 292 VSSCNIFVVKGNVISTPSIKGTILPGITRKSIIDVARSQGFEVEERLVAVDELLEADEVF 351

Query: 309 CTGTAVGLLP 318
           CTGTAV + P
Sbjct: 352 CTGTAVVVSP 361


>IMGA|Medtr4g122070.1 Branched-chain amino acid aminotransferase II
           chr04_pseudomolecule_IMGAG_V3 28818131-28814920 E
           EGN_Mt090430 20090702
          Length = 357

 Score =  335 bits (860), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 160/297 (53%), Positives = 215/297 (72%), Gaps = 5/297 (1%)

Query: 18  DTQSKT-SELGNDVSSLSWDNLGFDHVPTDYMFVMKCCGGDKFSDGELKTFGEIELNPFS 76
           DT+  + S++G + + ++W+ L F    TDYM VMKC  G+KFS G L  +G IE++P +
Sbjct: 9   DTEDGSESDMGENYADINWEGLSFSLTQTDYMHVMKCTKGEKFSQGSLIRYGNIEISPAA 68

Query: 77  SVLNYGQGIIENMKAYKKDDGSILLFRPEANALRMTMGADRMCMPAPTFDQFLEAVKVTV 136
            ++NYGQGI E +KAY+ +DG ILLFRPE NALRM MGADR+CMP+P+ +QF++AVK TV
Sbjct: 69  GIINYGQGIFEGLKAYRTEDGRILLFRPEENALRMKMGADRLCMPSPSVEQFVDAVKQTV 128

Query: 137 SANRRWIPPPNKGFLHIRPLLIGSGPVLILTPSPEFTFLIYVTPVRNYFESGVEPINLVV 196
            AN+RW+PPP KG L++RPLL+G+G  L L PSPE+TFLIY +PV  Y E G   +NL V
Sbjct: 129 LANKRWVPPPGKGTLYLRPLLMGTGAALGLAPSPEYTFLIYCSPVGKYHEGG--RLNLKV 186

Query: 197 EKEAHRAVP--GGVGSIKAIGNYAMIVXXXXXXXXNGFHGVLYLDAVHNKYLEEVSAANI 254
           E + HR++   GG G IK++ NYA I         NGF  VL+LD+   K +EE +A NI
Sbjct: 187 EDKFHRSIAGSGGTGGIKSVTNYAPIYTAVTEAKANGFSDVLFLDSATGKNIEEATACNI 246

Query: 255 FVVKDKTICTPALRGTILPGITRESVIDIARNLRFQVEEGRVSVEELFNADEVFCTG 311
           FVVK+  I TPA+ G+ILPG+TR+S+IDIA +L ++V E  +SVEE+ +ADEVFCTG
Sbjct: 247 FVVKENDIFTPAIDGSILPGVTRKSIIDIAIDLGYKVIERSISVEEMMSADEVFCTG 303


>IMGA|Medtr4g122080.1 Branched-chain amino acid aminotransferase II
           chr04_pseudomolecule_IMGAG_V3 28828130-28823696 E
           EGN_Mt090430 20090702
          Length = 358

 Score =  321 bits (823), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 148/301 (49%), Positives = 210/301 (69%)

Query: 16  PSDTQSKTSELGNDVSSLSWDNLGFDHVPTDYMFVMKCCGGDKFSDGELKTFGEIELNPF 75
           P++ ++   E     +++ WD L    +PTDYM+++K      +S+G L  FG I++NP 
Sbjct: 8   PNNGKASNRETEKIYANMDWDKLTCGVIPTDYMYIIKSNEDRTYSNGTLVPFGTIDINPH 67

Query: 76  SSVLNYGQGIIENMKAYKKDDGSILLFRPEANALRMTMGADRMCMPAPTFDQFLEAVKVT 135
           S+V+NYGQG+ E MKAY+  DG++ LFRPE NALRM MGA+R+ MP+P+ +Q+++AVK  
Sbjct: 68  SAVINYGQGLFEGMKAYRTKDGNVQLFRPEENALRMQMGAERLLMPSPSVEQYIDAVKQV 127

Query: 136 VSANRRWIPPPNKGFLHIRPLLIGSGPVLILTPSPEFTFLIYVTPVRNYFESGVEPINLV 195
           V AN+RW+PP  KG L+IRPLL GSGPVL + P+P+ T LI+  P+ N ++     +NL+
Sbjct: 128 VHANKRWVPPWGKGTLYIRPLLFGSGPVLGIGPAPQCTLLIFTNPISNIYKGQTSALNLL 187

Query: 196 VEKEAHRAVPGGVGSIKAIGNYAMIVXXXXXXXXNGFHGVLYLDAVHNKYLEEVSAANIF 255
           + +   RA PGG G +K+I NY ++          GF  VL+LDAV +KY+EEVS+ N F
Sbjct: 188 INENFPRAYPGGTGGVKSISNYPLVFQVVKEAKAKGFSDVLFLDAVEHKYIEEVSSCNAF 247

Query: 256 VVKDKTICTPALRGTILPGITRESVIDIARNLRFQVEEGRVSVEELFNADEVFCTGTAVG 315
           +VK K + T    GTILPG+TR+SVI++AR+L ++V E +VSVEEL  ADEVFCTGTAVG
Sbjct: 248 IVKGKVLSTAPTLGTILPGVTRKSVIELARDLGYEVMERKVSVEELLEADEVFCTGTAVG 307

Query: 316 L 316
           +
Sbjct: 308 I 308


>IMGA|Medtr1g099060.1 Aminotransferase, class IV
           chr01_pseudomolecule_IMGAG_V3 20138113-20145998 E
           EGN_Mt090430 20090702
          Length = 557

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 112/265 (42%), Gaps = 22/265 (8%)

Query: 63  ELKTFGEIELNPFSSVLNYGQGIIENMKAYKKDDGSILLFRPEANALRMTMGADRMCMP- 121
           E+ T    +++ F SV+  G  + E ++ YKK      +F+ E +  R++  A  +    
Sbjct: 268 EIVTRESAKVSVFDSVVQGGDSVWEGLRVYKKK-----IFKLEEHLDRISDSAKALAFEN 322

Query: 122 APTFDQFLEAVKVTVSAN--------RRWIPPPNKGFLHIRPLLIGSGPVLILTPSPEFT 173
            P+ D+  EA+  T+  N        R  +    K  +    L  G  P L L       
Sbjct: 323 VPSRDEIKEAIFKTLIRNGMFDNAHIRLSLTRGKKKIIQWELLPSGMSPALNLYGCTLIV 382

Query: 174 FLIYVTPVRNYFESGVEPINLVVEKEAHRAVPGGVGSIKAIGNYAMIVXXXXXXXXNGFH 233
              +  PV +  E G+    ++V     R  P  + S     N    +            
Sbjct: 383 LAEWKPPVYDN-ERGI----VLVTATTRRNSPYSLDSKIHHNNLLNNILAKVEGNNANAD 437

Query: 234 GVLYLDAVHNKYLEEVSAANIFVVKDKTICTPALRGTILPGITRESVIDIARNLRFQVEE 293
             + LD   + ++ E +A NIF+VK   + TP      LPGITR +V+D+     F +EE
Sbjct: 438 DAIMLDK--DGFVSETNATNIFIVKKGRVLTPHA-DYCLPGITRATVMDLVVKEHFILEE 494

Query: 294 GRVSVEELFNADEVFCTGTAVGLLP 318
            R+S+ E+  ADEV+ TGT   L P
Sbjct: 495 RRISLSEVHTADEVWTTGTMGELSP 519


>IMGA|Medtr1g099880.1 Aminotransferase, class IV
           chr01_pseudomolecule_IMGAG_V3 20558399-20564902 E
           EGN_Mt090430 20090702
          Length = 554

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 112/266 (42%), Gaps = 29/266 (10%)

Query: 63  ELKTFGEIELNPFSSVLNYGQGIIENMKAYKKDDGSILLFRPEANALRMTMGADRMCMP- 121
           E+ T    +++ F SV+  G  + E ++ YK+      +F+ E +  R+   A  +    
Sbjct: 266 EIVTRESAKVSVFDSVVQGGDSVWEGLRVYKRK-----IFKLEEHLDRLFDSAKALAFEN 320

Query: 122 APTFDQFLEAVKVTVSANRRWIPPPNKGFLHIRPLLI-------GSGPVLILTPSPEFTF 174
            PT D+  EA+  T+  N  +         HIR  L        G  P L L        
Sbjct: 321 VPTRDEIKEAIFKTLIRNGMF------DNAHIRLSLTRGKKVTSGMSPSLNLYGCTLIVL 374

Query: 175 LIYVTPVRNYFESGVEPINLVVEKEAHRAVPGGVGSIKAIGNYAMIVXXXXXXXXNGFHG 234
             +  PV +  E G+    ++V     R  P  + S     N    +             
Sbjct: 375 AEWKPPVYDN-EHGI----VLVTATTRRNAPNSLDSKIHHNNLLNNILAKVEGNNAKADD 429

Query: 235 VLYLDAVHNKYLEEVSAANIFVVKDKTICTPALRGTILPGITRES--VIDIARNLRFQVE 292
            + LD   + ++ E +A NIF+VK   + TP      LPGITR +  V+D+    +F +E
Sbjct: 430 AIMLDK--DGFVSETNATNIFIVKKGRVLTPHA-DYCLPGITRATFKVMDLVVKEQFILE 486

Query: 293 EGRVSVEELFNADEVFCTGTAVGLLP 318
           E R+S+ E+  ADEV+ TGT   L P
Sbjct: 487 ERRISLSEVHTADEVWTTGTMGELSP 512