Jatropha Genome Database

JcCB0053181.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0053181.10 + phase: 0 /partial
         (490 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g128530.1 Aminotransferase class-III chr08_pseudomole...   494   e-140

>IMGA|Medtr8g128530.1 Aminotransferase class-III
           chr08_pseudomolecule_IMGAG_V3 30029739-30036322 E
           EGN_Mt090430 20090702
          Length = 434

 Score =  494 bits (1273), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 259/436 (59%), Positives = 310/436 (71%), Gaps = 23/436 (5%)

Query: 54  FSASTSPPLQFPLNHPIYMIWGSNTSLGKTLVSTGLASSFLLSPPPAXXXXXXXXXXXFL 113
            S++TS PL+ PL+HPIY IWGSNT++GKTLVS G+A+S LLS               F 
Sbjct: 18  LSSTTSQPLELPLSHPIYTIWGSNTAVGKTLVSAGIAASSLLS---------SPSPIKFH 68

Query: 114 YLKPVQTGFPSDSDSHFVFSKLSSLASRYNPPFXXXXXXXXXXXXXXXXXXFGGCFETNE 173
           YLKP+QTGFPSDSDS F+F+KL  L +R NP                    +     TN+
Sbjct: 69  YLKPLQTGFPSDSDSRFIFNKLRHLHNR-NPYNSRISISLSNRVLNVPPAAW-----TNQ 122

Query: 174 FKYGMYNLNFNEKKKVLRDEAGVSELICETLYAWKEAVSPHLAAERENGVVEDSAVMEML 233
            K     +N      V  D +  SELIC+TLYAW+EAVSPHLAAERE  VVEDSAV+  L
Sbjct: 123 VK----EIN----GFVGEDGSDSSELICKTLYAWEEAVSPHLAAEREGFVVEDSAVLGTL 174

Query: 234 EQCLSNELKFEGENETMDAFCVVETAGGVASPGPSGTLQCDLYRPFRFPGVLVGDGRLGG 293
           ++C  + ++     E  +  C+VETAGGVASPGPSG+LQCDLYRPFR P +LVGDGRLGG
Sbjct: 175 QRCFRDVVESGVGKERSEVLCIVETAGGVASPGPSGSLQCDLYRPFRIPAILVGDGRLGG 234

Query: 294 ISGTISAYESLKLRGYDIVAVVFEDHGLVNEVPLLSYLQNRXXXXXXXXXXQDMSNDLVE 353
           ISGTISAYESL LRGYD+VA+VFEDHGL+NE PLLSY++N+          +D SNDL+E
Sbjct: 235 ISGTISAYESLTLRGYDVVAIVFEDHGLLNEGPLLSYVRNKVPVLVLPPVPKDPSNDLME 294

Query: 354 WFGSSSEPFNSLQGILLSAFSERLRRLKEMPKKATDVFWWPFTQHKLVPEETVTVIDSRC 413
           WF  S   FN+L+ I+LSA+ ER+++L EMP KA D+ WWPFTQHKLVP+  VTVIDSRC
Sbjct: 295 WFEGSFNVFNNLKEIMLSAYFERIQKLHEMPTKARDIIWWPFTQHKLVPDGRVTVIDSRC 354

Query: 414 GENFAVYKAQNKDFITEQFDACASWWTQGPNATLQIELARDMGYAAGRFGHVMFPENVYE 473
           GENFAV+KAQ  + I   FD CASWWTQGP+A LQ ELAR+MGY A RFGHVMFPENV+E
Sbjct: 355 GENFAVFKAQKTEVIAPLFDGCASWWTQGPDAILQAELAREMGYTAARFGHVMFPENVHE 414

Query: 474 PALKCAELLLEGVGKG 489
           PAL  AELLL+GVGKG
Sbjct: 415 PALDSAELLLQGVGKG 430