Jatropha Genome Database

JcCB0050531.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0050531.20 - phase: 0 
         (263 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr6g041190.1 3-oxo-5-alpha-steroid 4-dehydrogenase, C-te...    77   1e-14
IMGA|Medtr4g097340.1 3-oxo-5-alpha-steroid 4-dehydrogenase, C-te...    75   4e-14
IMGA|Medtr4g097490.1 3-oxo-5-alpha-steroid 4-dehydrogenase, C-te...    75   4e-14
IMGA|Medtr5g094710.1 3-oxo-5-alpha-steroid 4-dehydrogenase, C-te...    49   3e-06

>IMGA|Medtr6g041190.1 3-oxo-5-alpha-steroid 4-dehydrogenase,
           C-terminal chr06_pseudomolecule_IMGAG_V3 8788138-8785735
           F EGN_Mt090430 20090702
          Length = 270

 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 66/105 (62%), Gaps = 2/105 (1%)

Query: 158 GLFVFIWGMWINIWSDRVLVGLKRQGGG-YKVPRGGWFELVSCPNYFGEIVEWVGWSLMT 216
           G+ +F+ G+  N +   +L  L+ +G   YK+P+GG F+ V CP+Y  EI+ + G+S ++
Sbjct: 165 GIALFLVGVTGNFYHHYLLSKLRGKGEKEYKIPKGGLFDFVICPHYLFEIIGFYGFSFIS 224

Query: 217 WSWVGFGFFLYTCANLVPRAHANHKWYQDKFGEDYPKSRKAVIPF 261
            +   F F + T   L+ R++A  +WY  KF +D+PK+ KA+IPF
Sbjct: 225 QTLYSFSFAIGTTFYLLGRSYATREWYLSKF-DDFPKNVKAIIPF 268


>IMGA|Medtr4g097340.1 3-oxo-5-alpha-steroid 4-dehydrogenase,
           C-terminal chr04_pseudomolecule_IMGAG_V3
           20806327-20809560 E EGN_Mt090430 20090702
          Length = 280

 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 63/118 (53%), Gaps = 13/118 (11%)

Query: 153 WKFIGGLFVFIWGMWINIWSDRVLVG---LKRQGGGYKVPRGGWFELVSCPNYFGEIVEW 209
           WK   G  +F WG WI+ +    ++G     RQ   Y +PRG WFE+VS P+Y  EIV +
Sbjct: 167 WKHWIGAAIFSWG-WIHQYRCHKILGSLRESRQADEYVIPRGDWFEIVSSPHYLSEIVIY 225

Query: 210 VGWSLMTWS-----WVGFGFFLYTCANLVPRAHANHKWYQDKFGEDYPKSRKAVIPFL 262
             + + T       W+ F F     ANL   A   H WY+ KF EDYP SR A+IPF+
Sbjct: 226 ASFVVATGGSNLTIWLLFAF---VVANLAFAAVETHSWYRRKF-EDYPSSRFAIIPFI 279


>IMGA|Medtr4g097490.1 3-oxo-5-alpha-steroid 4-dehydrogenase,
           C-terminal chr04_pseudomolecule_IMGAG_V3
           20880756-20877526 E EGN_Mt090430 20090702
          Length = 332

 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 63/118 (53%), Gaps = 13/118 (11%)

Query: 153 WKFIGGLFVFIWGMWINIWSDRVLVG---LKRQGGGYKVPRGGWFELVSCPNYFGEIVEW 209
           WK   G  +F WG WI+ +    ++G     RQ   Y +PRG WFE+VS P+Y  EIV +
Sbjct: 219 WKHWIGAAIFSWG-WIHQYRCHKILGSLRESRQADEYVIPRGDWFEIVSSPHYLSEIVIY 277

Query: 210 VGWSLMTWS-----WVGFGFFLYTCANLVPRAHANHKWYQDKFGEDYPKSRKAVIPFL 262
             + + T       W+ F F     ANL   A   H WY+ KF EDYP SR A+IPF+
Sbjct: 278 ASFVVATGGSNLTIWLLFAF---VVANLAFAAVETHSWYRRKF-EDYPSSRFAIIPFI 331


>IMGA|Medtr5g094710.1 3-oxo-5-alpha-steroid 4-dehydrogenase,
           C-terminal chr05_pseudomolecule_IMGAG_V3
           37494913-37491130 E EGN_Mt090430 20090702
          Length = 310

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 5/84 (5%)

Query: 184 GGYKVPRGGWFELVSCPNYFGEIVEWVGWSLMTWSWVGFGFFLYTCANLVPRAHANHKWY 243
           GGY++PRG  F +V+C NY  EI +W+G+++ T +  G+ F       +   A A H+  
Sbjct: 227 GGYQIPRGFLFNIVTCANYTTEIYQWLGFNIATQTIAGYIFLAVAAFIMTNWALAKHRRL 286

Query: 244 QDKF-GED----YPKSRKAVIPFL 262
           +  F G++    YP+    + PFL
Sbjct: 287 KKLFDGKEGRPRYPRRWVILPPFL 310