Jatropha Genome Database
- JcCB0049951.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0049951.20 - phase: 1 /pseudo/partial
(470 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr1g132560.1 Copper amine oxidase; ; ; ; chr01_pseudomol... 460 e-130
IMGA|Medtr1g132530.1 Copper amine oxidase; ; ; chr01_pseudomolec... 396 e-110
IMGA|Medtr3g109760.1 Copper amine oxidase; ; ; chr03_pseudomolec... 380 e-106
IMGA|AC229702_7.1 Copper amine oxidase; ; ; AC229702.6 83591-790... 320 1e-87
IMGA|Medtr3g114690.1 Copper amine oxidase; ; ; chr03_pseudomolec... 150 1e-36
IMGA|Medtr5g034500.1 Copper amine oxidase; ; ; chr05_pseudomolec... 130 1e-30
>IMGA|Medtr1g132560.1 Copper amine oxidase; ; ; ;
chr01_pseudomolecule_IMGAG_V3 29615628-29612795 E
EGN_Mt090430 20090702
Length = 673
Score = 460 bits (1183), Expect = e-130, Method: Compositional matrix adjust.
Identities = 209/313 (66%), Positives = 256/313 (81%), Gaps = 2/313 (0%)
Query: 155 PVKMPNIFCIFERFAGDIMWRHTEYSIPEQVVTEVRPEVSLVVRMVSTVGNYDYINDWEF 214
PVK+ N FCIFE++AGDIMWRHTE +IP +V+TEVR +VSLVVR VSTVGNYDY+ DWEF
Sbjct: 360 PVKISNAFCIFEKYAGDIMWRHTEIAIPNEVITEVRSDVSLVVRSVSTVGNYDYVIDWEF 419
Query: 215 KQSGSIKVTVGLTGLLEVRGSIYTHKDQIKEEVYGTLLAENTMGVNHDHFLTYHLDLDVD 274
K SGSIK+ VGLTG+L ++ YT+ DQIKE+++GTLLA+NT+G+ HDHF TY+LDLD+D
Sbjct: 420 KPSGSIKLGVGLTGILGIKAGTYTNTDQIKEDIHGTLLADNTIGIYHDHFFTYYLDLDID 479
Query: 275 GASNSFIKSKMQMTPITHNLSPRKSYWKVISEVAKTESDARIKLGLEEADLLVVNPNKKT 334
G +NSF+K+ ++ + PRKSYW V+ E A+TE+DAR+ +G++ ++LLVVNP+KKT
Sbjct: 480 GEANSFVKTNLETVRVKDQTIPRKSYWTVVKETARTEADARVNIGIKPSELLVVNPSKKT 539
Query: 335 KMGNLIGYRLIPGSATSPLLSEDDYTQIRGAFTKYNVWVTPYNKSEKWAGGLYADQSRGD 394
K GN IGYRL+PG PLL DDY QIRGAFT YNVWVTPYNK+EKWAGGLY D SRGD
Sbjct: 540 KQGNQIGYRLLPGPIVHPLLLTDDYPQIRGAFTNYNVWVTPYNKTEKWAGGLYVDHSRGD 599
Query: 395 DTLAIWSLRNRVIENKDIVLWYTVGFHHIPYQEDFPLMPTLSSGFELRPANFFDRNSVLK 454
DTLA+WSLR IENKDIVLW+T+GFHH+P QEDFP+MPTLS GFELRP NFF+ N VLK
Sbjct: 600 DTLAVWSLRR--IENKDIVLWHTMGFHHVPSQEDFPVMPTLSGGFELRPTNFFESNPVLK 657
Query: 455 VKPPRPVDQSNCS 467
K P+ V NC+
Sbjct: 658 TKSPKAVHWPNCT 670
>IMGA|Medtr1g132530.1 Copper amine oxidase; ; ;
chr01_pseudomolecule_IMGAG_V3 29599410-29602682 H
EGN_Mt090430 20090702
Length = 658
Score = 396 bits (1017), Expect = e-110, Method: Compositional matrix adjust.
Identities = 181/297 (60%), Positives = 231/297 (77%)
Query: 157 KMPNIFCIFERFAGDIMWRHTEYSIPEQVVTEVRPEVSLVVRMVSTVGNYDYINDWEFKQ 216
++P C+FER +G++ WRH E + P +++ + +++LVVRM++TVGNYDYI DWEF +
Sbjct: 362 QVPRAICMFERNSGNVAWRHMEINNPTKLIRDGEADITLVVRMIATVGNYDYILDWEFLK 421
Query: 217 SGSIKVTVGLTGLLEVRGSIYTHKDQIKEEVYGTLLAENTMGVNHDHFLTYHLDLDVDGA 276
SGSIKV V LTG+LE++ YTHK+QIKE V+GTL+AENT+ HDH +TY+LDLD+D
Sbjct: 422 SGSIKVGVALTGVLEMKAVPYTHKNQIKERVFGTLVAENTIANYHDHLVTYYLDLDIDDN 481
Query: 277 SNSFIKSKMQMTPITHNLSPRKSYWKVISEVAKTESDARIKLGLEEADLLVVNPNKKTKM 336
+NSFI +K+Q + +PRKSYW V E K E++ARI LGLE +LL+VNPNK TK+
Sbjct: 482 ANSFINAKLQKVKASGFGTPRKSYWTVNKEAVKREAEARITLGLEPNELLIVNPNKMTKL 541
Query: 337 GNLIGYRLIPGSATSPLLSEDDYTQIRGAFTKYNVWVTPYNKSEKWAGGLYADQSRGDDT 396
GN +GYRLI G S LL +DDY Q R ++TKY VWVTPYNKSE+WAGG YAD+SRGDD
Sbjct: 542 GNQVGYRLISGQPVSSLLDDDDYPQRRASYTKYQVWVTPYNKSERWAGGFYADRSRGDDG 601
Query: 397 LAIWSLRNRVIENKDIVLWYTVGFHHIPYQEDFPLMPTLSSGFELRPANFFDRNSVL 453
LA+WS RNR IEN DIVLW+TVG HH+PYQEDFP+MPT+ GFELRPANFF+ N +L
Sbjct: 602 LAVWSQRNREIENTDIVLWHTVGIHHVPYQEDFPVMPTVQGGFELRPANFFESNPLL 658
>IMGA|Medtr3g109760.1 Copper amine oxidase; ; ;
chr03_pseudomolecule_IMGAG_V3 27564255-27560584 E
EGN_Mt090430 20090702
Length = 731
Score = 380 bits (976), Expect = e-106, Method: Compositional matrix adjust.
Identities = 178/317 (56%), Positives = 235/317 (74%), Gaps = 3/317 (0%)
Query: 155 PVKMPNIFCIFERFAGDIMWRHTEYSIPEQVVTEVRPEVSLVVRMVSTVGNYDYINDWEF 214
P PN+ CIFE +AGDI WRH E I + VTEVRP+V+LVVRM + V NYDYI DWEF
Sbjct: 411 PYVQPNMICIFESYAGDIAWRHAECPITDIKVTEVRPKVTLVVRMAAAVANYDYIMDWEF 470
Query: 215 KQSGSIKVTVGLTGLLEVRGSIYTHKDQI--KEEVYGTLLAENTMGVNHDHFLTYHLDLD 272
+ G I+ VGL+G+L V+G+ Y H +Q+ +E +YGTLL+EN +GV HDH++TY+LD+D
Sbjct: 471 QTDGLIRSKVGLSGILMVKGTTYDHMNQVPDQEYLYGTLLSENIIGVIHDHYVTYYLDMD 530
Query: 273 VDGASNSFIKSKMQMTPITHNLSPRKSYWKVISEVAKTESDARIKLGL-EEADLLVVNPN 331
+DG+ NSF+K ++ + SPRKSY K + +VAKTE DA+IKL L ++ +VNP+
Sbjct: 531 IDGSDNSFVKVNIKKQETSPGESPRKSYLKAVRKVAKTEKDAQIKLQLYNPSEFHMVNPS 590
Query: 332 KKTKMGNLIGYRLIPGSATSPLLSEDDYTQIRGAFTKYNVWVTPYNKSEKWAGGLYADQS 391
KKT++GN +GY+L+PG+ + LL DD Q R AFT +WVTPYNKSE+WAGGL QS
Sbjct: 591 KKTRVGNPVGYKLVPGATAASLLDHDDPPQKRAAFTNNQIWVTPYNKSEEWAGGLLVYQS 650
Query: 392 RGDDTLAIWSLRNRVIENKDIVLWYTVGFHHIPYQEDFPLMPTLSSGFELRPANFFDRNS 451
+GDDTL +WS R+R IENKDIVLWYTVGFHH+P QED+P+MPT+SS F+L+P NFF+RN
Sbjct: 651 QGDDTLQVWSDRDRPIENKDIVLWYTVGFHHVPCQEDYPIMPTVSSSFDLKPVNFFERNP 710
Query: 452 VLKVKPPRPVDQSNCSA 468
+L++ P D C A
Sbjct: 711 ILRMPPNFQDDLPVCKA 727
>IMGA|AC229702_7.1 Copper amine oxidase; ; ; AC229702.6 83591-79089
E EGN_Mt090430 20090702
Length = 644
Score = 320 bits (819), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 156/303 (51%), Positives = 198/303 (65%), Gaps = 40/303 (13%)
Query: 155 PVKMPNIFCIFERFAGDIMWRHTEYSIPEQVVTEVRPEVSLVVRMVSTVGNYDYINDWEF 214
P + N C+FE++ G IMWRHTE SIP + + E R EV+L+VR V TVGNYD + DWEF
Sbjct: 361 PSLLKNAICVFEQY-GSIMWRHTETSIPNEFIEESRTEVNLIVRTVVTVGNYDNVLDWEF 419
Query: 215 KQSGSIKVTVGLTGLLEVRGSIYTHKDQIKEEVYGTLLAENTMGVNHDHFLTYHLDLDVD 274
K SGSIK ++ L+G+LE++ + H D+IK E+YG L++ N++G+ HDHF Y+LD D+D
Sbjct: 420 KTSGSIKPSIALSGILEIKATNIKHNDEIKGELYGKLVSANSIGIYHDHFYIYYLDFDID 479
Query: 275 GASNSFIKSKMQMTPITHNLSPRKSYWKVISEVAKTESDARIKLGLEEADLLVVNPNKKT 334
GA NSF K+ ++ IT S RK
Sbjct: 480 GAENSFEKTNLKTVRITDGSSKRK------------------------------------ 503
Query: 335 KMGNLIGYRLIPGSATSPLLSEDDYTQIRGAFTKYNVWVTPYNKSEKWAGGLYADQSRGD 394
+GN IGYRLIP LL+EDDY QIRGAFT YNVWVTPYN++EKWAGGLY D SRGD
Sbjct: 504 -IGNHIGYRLIPAIPAHSLLTEDDYPQIRGAFTNYNVWVTPYNRTEKWAGGLYVDHSRGD 562
Query: 395 DTLAIWSLRNRVIENKDIVLWYTVGFHHIPYQEDFPLMPTLSSGFELRPANFFDRNSVLK 454
DTLA+W+ +NR I NKDIV+W+ VG HH+P QEDFP+MP LS+ FELRP NF +L
Sbjct: 563 DTLAVWTKQNRDIVNKDIVMWHVVGIHHVPTQEDFPIMPLLSTSFELRPTNFL--RGILS 620
Query: 455 VKP 457
+KP
Sbjct: 621 LKP 623
>IMGA|Medtr3g114690.1 Copper amine oxidase; ; ;
chr03_pseudomolecule_IMGAG_V3 29102867-29095885 E
EGN_Mt090430 20090702
Length = 772
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 156/308 (50%), Gaps = 21/308 (6%)
Query: 160 NIFCIFERFAGDIMWRHTEYSIPEQVVTEVRPEVSLVVRMVSTVGNYDYINDWEFKQS-- 217
N C+ E G I+W+H ++ + EVR L V V TV NY+Y W F Q+
Sbjct: 447 NCVCLHEEDHG-ILWKHQDW---RTGLAEVRRSRRLSVSFVCTVANYEYAFFWHFYQASR 502
Query: 218 -GSIKVTVGLTGLLEVRGSIYTHKDQIKEEVYGTLLAENTMGVNHDHFLTYHLDLDVDG- 275
G I+ V LTG+L + G++ ++++ YGT++A H HF +D+ VD
Sbjct: 503 DGKIEAEVKLTGILSL-GALM--PGEVRK--YGTMIAPGLYAPVHQHFFVARMDMSVDSR 557
Query: 276 ---ASNSFIKSKMQMT-PITHNLSPRKSYWKVISEVAKTESDA-RIKLGLEEADLLVVNP 330
A N ++ M++ P N+ Y + + ++E +A R L +V N
Sbjct: 558 PGEALNQVVEVNMKVEEPGEKNIHNNAFYAE--ETLLRSELEAMRDCNPLTARHWIVRNT 615
Query: 331 NKKTKMGNLIGYRLIPGSATSPLLSEDDYTQIRGAFTKYNVWVTPYNKSEKWAGGLYADQ 390
+ G L GY+L+PGS PL + R AF K+NVWVT Y++ E + GG + +Q
Sbjct: 616 RTGNRTGQLTGYKLVPGSNCLPLAGSEAKFLRRAAFLKHNVWVTAYSRDEMFPGGEFPNQ 675
Query: 391 S-RGDDTLAIWSLRNRVIENKDIVLWYTVGFHHIPYQEDFPLMPTLSSGFELRPANFFDR 449
+ R + LA W +NR +E +IVLWY G H+P ED+P+MP GF L P FF+
Sbjct: 676 NPRVGEGLATWIKQNRSLEETNIVLWYVFGITHVPRLEDWPVMPVEHIGFMLMPHGFFNC 735
Query: 450 NSVLKVKP 457
+ + V P
Sbjct: 736 SPAVDVPP 743
>IMGA|Medtr5g034500.1 Copper amine oxidase; ; ;
chr05_pseudomolecule_IMGAG_V3 14175089-14179469 E
EGN_Mt090430 20090702
Length = 723
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 140/305 (45%), Gaps = 32/305 (10%)
Query: 160 NIFCIFERFAGDIMWRHTEYSIPEQVVTEVRPEVSLVVRMVSTVGNYDYINDWEFKQSGS 219
N C+ E G I+W+H ++ + EVR L V + T G
Sbjct: 419 NCVCLHEEDHG-ILWKHQDW---RTGLAEVRRSRRLTVSFICT--------------DGK 460
Query: 220 IKVTVGLTGLLEVRGSIYTHKDQIKEEVYGTLLAENTMGVNHDHFLTYHLDLDVDGASNS 279
I+ V LTG+L + G++ + + YGT +A H HF +D+ VD
Sbjct: 461 IEAEVKLTGILSL-GALQPGETR----KYGTTIAPGLYAPVHQHFFVARMDMAVDCKPGE 515
Query: 280 FIKSKMQMT-----PITHNLSPRKSYWKVISEVAKTESDA-RIKLGLEEADLLVVNPNKK 333
+++ P +N+ Y + + K+E +A R L +V N
Sbjct: 516 AFNQVVEVDVKVEDPGKNNVHNNAFYAE--ERLLKSELEAMRDCNPLSARHWIVRNTRTV 573
Query: 334 TKMGNLIGYRLIPGSATSPLLSEDDYTQIRGAFTKYNVWVTPYNKSEKWAGGLYADQS-R 392
+ G L GYRL+PGS PL + R AF K+N+WVTPY +E GG + +Q+ R
Sbjct: 574 NRTGQLTGYRLVPGSNCLPLAGSEAKFLRRAAFLKHNLWVTPYVHNEMHPGGEFPNQNPR 633
Query: 393 GDDTLAIWSLRNRVIENKDIVLWYTVGFHHIPYQEDFPLMPTLSSGFELRPANFFDRNSV 452
D LA W +NR +E DIVLWY G HIP ED+P+MP GF L P FF+ +
Sbjct: 634 VGDGLATWVKQNRSLEEADIVLWYVFGVTHIPRLEDWPVMPVERIGFMLMPHGFFNCSPA 693
Query: 453 LKVKP 457
+ V P
Sbjct: 694 VDVPP 698