Jatropha Genome Database

JcCB0047491.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0047491.20 + phase: 0 /partial
         (319 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr6g022550.1 NAD-dependent glycerol-3-phosphate dehydrog...   481   e-136
IMGA|Medtr7g032290.1 Peptidase S26A, signal peptidase I; NAD-dep...   458   e-129
IMGA|Medtr5g076490.1 NAD-dependent glycerol-3-phosphate dehydrog...   111   4e-25
IMGA|Medtr7g108180.1 NAD-dependent glycerol-3-phosphate dehydrog...    60   2e-09

>IMGA|Medtr6g022550.1 NAD-dependent glycerol-3-phosphate
           dehydrogenase chr06_pseudomolecule_IMGAG_V3
           5053441-5060116 E EGN_Mt090430 20090702
          Length = 381

 Score =  481 bits (1238), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 228/276 (82%), Positives = 252/276 (91%)

Query: 24  NDGSGAASGAFHMSKVTVVGSGNWGSVAAKLIASNTLKLTSFHDEVRMWVFEEALPSGEK 83
           N+G        + SKVTV+GSGNWGSVA+KLIASNT+++ +FHDEVRMWV+EE LPSGEK
Sbjct: 16  NNGLNNVDDVTNRSKVTVIGSGNWGSVASKLIASNTIRMNNFHDEVRMWVYEETLPSGEK 75

Query: 84  LTDVINRTNENVKYLPGIKLGKNVVADPDLDNAVRDANMLVFVTPHQFMEGICKRLVGKI 143
           LTDVIN+TNENVKYLPGIKLGKNVVADPDL+NAVRDANMLVFVTPHQFMEGICKR+ GKI
Sbjct: 76  LTDVINQTNENVKYLPGIKLGKNVVADPDLENAVRDANMLVFVTPHQFMEGICKRIAGKI 135

Query: 144 KEGVEAISLIKGMEVKMEGPCMISSLISSQLRVNCCVLMGANIANEIAVEKFSEATVGYK 203
           +   EAISL+KGMEVKMEGPCMIS+LIS +L +NC VLMGANIANEIAVEKFSEATVGY+
Sbjct: 136 RADAEAISLVKGMEVKMEGPCMISTLISEELGINCSVLMGANIANEIAVEKFSEATVGYR 195

Query: 204 GNREIAEKWVQLFSTPYFMVTPVQDVEGVELCGTLKNVVALAAGFVDGLEMGNNTKAAIM 263
            NRE AE+WV LF TPYF+VT VQDVEGVELCGTLKNVVA+AAGFVDGLEMGNNTKAAIM
Sbjct: 196 QNREAAERWVHLFYTPYFIVTAVQDVEGVELCGTLKNVVAIAAGFVDGLEMGNNTKAAIM 255

Query: 264 RIGLREMRAFSKLLFSSVKDSTFFESCGVADVITTC 299
           R+GLREM+AFSKLLF SVKDSTFFESCGVAD+ITTC
Sbjct: 256 RLGLREMKAFSKLLFPSVKDSTFFESCGVADLITTC 291


>IMGA|Medtr7g032290.1 Peptidase S26A, signal peptidase I;
           NAD-dependent glycerol-3-phosphate dehydrogenase,
           C-terminal chr07_pseudomolecule_IMGAG_V3 7988957-7993641
           H EGN_Mt090430 20090702
          Length = 348

 Score =  458 bits (1178), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 214/264 (81%), Positives = 246/264 (93%)

Query: 36  MSKVTVVGSGNWGSVAAKLIASNTLKLTSFHDEVRMWVFEEALPSGEKLTDVINRTNENV 95
           M+KVT+VGSGNWGSVAAKLIASNT+KL++FHDEVRMWVFEE LP+G+KLTDVI +TNENV
Sbjct: 1   MNKVTIVGSGNWGSVAAKLIASNTIKLSNFHDEVRMWVFEETLPNGDKLTDVIKQTNENV 60

Query: 96  KYLPGIKLGKNVVADPDLDNAVRDANMLVFVTPHQFMEGICKRLVGKIKEGVEAISLIKG 155
           KYLPG+KLG+NVVADPDL+NAV+DANMLVFVTPHQFMEGICKRL GKI+   E ISL+KG
Sbjct: 61  KYLPGVKLGQNVVADPDLENAVKDANMLVFVTPHQFMEGICKRLDGKIRTDAEGISLVKG 120

Query: 156 MEVKMEGPCMISSLISSQLRVNCCVLMGANIANEIAVEKFSEATVGYKGNREIAEKWVQL 215
           MEVK EG  MIS+LIS+QL++NC VLMGANIANEIA++KFSEAT+GY+ N+E AE+WVQL
Sbjct: 121 MEVKKEGASMISTLISNQLKINCSVLMGANIANEIAMQKFSEATIGYRENKEAAERWVQL 180

Query: 216 FSTPYFMVTPVQDVEGVELCGTLKNVVALAAGFVDGLEMGNNTKAAIMRIGLREMRAFSK 275
           F+TPYF VT VQDVEGVE+CGTLKN+VA+AAGF+DGLEMGNNTK+AIMRIGL+EM AFSK
Sbjct: 181 FNTPYFNVTSVQDVEGVEMCGTLKNIVAIAAGFIDGLEMGNNTKSAIMRIGLKEMMAFSK 240

Query: 276 LLFSSVKDSTFFESCGVADVITTC 299
           LLF SVK STFFESCGVAD+ITTC
Sbjct: 241 LLFPSVKYSTFFESCGVADLITTC 264


>IMGA|Medtr5g076490.1 NAD-dependent glycerol-3-phosphate
           dehydrogenase, C-terminal chr05_pseudomolecule_IMGAG_V3
           28000397-28008960 E EGN_Mt090430 20090702
          Length = 453

 Score =  111 bits (278), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 135/265 (50%), Gaps = 19/265 (7%)

Query: 38  KVTVVGSGNWGSVAAKLIASNTLKLTSFHDEVRMWVFEEALPSGEKLTDVINRTNENVKY 97
           KV V+G G++G+  A  +A    +L     EV M V +  + S       IN ++ N  Y
Sbjct: 122 KVVVLGGGSFGTAMAAHVAHRKDQL-----EVVMLVRDPEVCSS------INESHCNRNY 170

Query: 98  LPGIKLGKNVVADPDLDNAVRDANMLVFVTPHQFMEGICKRLVGKIKEGVEAISLIKGME 157
            P   L +NVVA  D  +A+RDA+  +   P QF     + +   +  G+  ISL KG+E
Sbjct: 171 FPDHTLPENVVATTDAKSALRDADYCLHAVPVQFSAAFLESVADYVDPGLPFISLSKGLE 230

Query: 158 VKMEGPCMISSLISSQLRVN---CCVLMGANIANEIAVEKFSEATVGYKGNREIAEKWVQ 214
           +      M++ +I   LR +      L G + A E+ + K   A V    ++++A    Q
Sbjct: 231 LNTLR--MMAQIIPQALRNSRQPFVALSGPSFALEL-MNKLPTAMVVASKDKKLANAVQQ 287

Query: 215 LFSTPYFMVTPVQDVEGVELCGTLKNVVALAAGFVDGLEMGNNTKAAIMRIGLREMRAFS 274
           L ++ +  ++   DV GVE+ G LKNV+A+AAG V+G+ +GNN+ AA++  G  E+R  +
Sbjct: 288 LLASNHLRISTSSDVTGVEIAGALKNVLAIAAGIVEGMNLGNNSMAALVTQGCSEIRWLA 347

Query: 275 KLLFSSVKDSTFFESCGVADVITTC 299
             +    K +T     G  D++ TC
Sbjct: 348 TKM--GAKPTTITGLSGTGDIMLTC 370


>IMGA|Medtr7g108180.1 NAD-dependent glycerol-3-phosphate
           dehydrogenase, C-terminal chr07_pseudomolecule_IMGAG_V3
           25430587-25433755 E EGN_Mt090430 20090702
          Length = 457

 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 117/266 (43%), Gaps = 61/266 (22%)

Query: 38  KVTVVGSGNWGSVAAKLIASNTLKLTSFHDEVRMWVFEEA-----LPSGEKLTDVINRTN 92
           ++  +G+G WGSV A L+  +      F D+V++ ++  A       + E L DVIN   
Sbjct: 38  RIVCIGAGAWGSVFAALLQDS---YGQFRDKVQIRIWRRAGRAIDRSTAEHLFDVINSRE 94

Query: 93  ENVK-------YLPGI--KLGK---------------NVVADP--------DLDNAVRDA 120
           + ++       YL  +  +LG                N++  P        +L  AV DA
Sbjct: 95  DVLRRLIRRCAYLKYVEARLGDRTLYADEILKDGFCLNMIDTPVCPLKVVTNLQEAVWDA 154

Query: 121 NMLVFVTPHQFMEGICKRLVGKIKEGVEA---ISLIKGMEVKMEG-PCMIS--SLISSQL 174
           +++V   P      I + +    KE +     ISL KG+E  +E  P +++   +I    
Sbjct: 155 DIVVNGLPSTETREIFEEISKYWKERISVPVIISLSKGIEAALEPVPHIVTPTKMIHQAT 214

Query: 175 RV---NCCVLMGANIANEIAVEKFSEATV-GYKGNREIAEKW----VQLFSTPYFMVTPV 226
            V   N   L G NIA+EI  ++++ A + G       AEKW     +    P+F+V   
Sbjct: 215 GVPMENILYLGGPNIASEIYNKEYANARICG-------AEKWRKPLAKFLRQPHFIVWDN 267

Query: 227 QDVEGVELCGTLKNVVALAAGFVDGL 252
            D+   E+ G LKNV A+ AG V  L
Sbjct: 268 SDLVTHEVMGGLKNVYAIGAGMVASL 293