Jatropha Genome Database

JcCB0046591.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0046591.10 - phase: 2 /pseudo/partial
         (361 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g104850.1 DNA topoisomerase II; Serine/threonine-spec...   391   e-109
IMGA|Medtr4g067100.1 Serine/threonine-specific protein phosphata...   383   e-107
IMGA|Medtr1g111020.1 Serine/threonine-specific protein phosphata...    99   3e-21

>IMGA|Medtr2g104850.1 DNA topoisomerase II;
           Serine/threonine-specific protein phosphatase and
           bis(5-nucleosyl)-tetraphosphatase
           chr02_pseudomolecule_IMGAG_V3 24835580-24845823 E
           EGN_Mt090430 20090702
          Length = 995

 Score =  391 bits (1005), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 226/373 (60%), Positives = 247/373 (66%), Gaps = 15/373 (4%)

Query: 1   YATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVSF 60
           YATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAV  
Sbjct: 275 YATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV 334

Query: 61  SYXXXXXXXXXXGNLISAGTIIISVC-------CIFRFLLM-----RDSMCLEVHLEAVG 108
           +           G  +   +  ++V        C  + ++      R S        AV 
Sbjct: 335 NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTTPRTGRYSADAAGGDAAVE 394

Query: 109 WXKIHPVLQAAVGDLIFIYGGLRGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNIHA 168
             +      AAVGDLIFIYGGLRGGV                              N+ A
Sbjct: 395 LTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTSAASHAAAAAAS-NVQA 453

Query: 169 GRIPGRYGFVDERTRQTMSEAVPDGAVVLGNPVAPPINGDMYTDISTENAMLPGPRRTSK 228
           GR+PGRYGF D+R RQTM+E   DG+VVLGNPVAPP+NGD+YTDISTENA+L GPRRT+K
Sbjct: 454 GRLPGRYGF-DDRPRQTMTEVAADGSVVLGNPVAPPMNGDIYTDISTENAILQGPRRTAK 512

Query: 229 GVEYLVXXXXXXXXXXXXXXXXXXXRQVNGEVELPDRDRGAEATPSGKQISTLIKPDSSG 288
           GVEYLV                   RQ NGEVELPDRDRGAEATPSGK  S+LIKPD   
Sbjct: 513 GVEYLVEASAAEAEAISAALAAAKARQENGEVELPDRDRGAEATPSGKHTSSLIKPDPV- 571

Query: 289 SNNIVPPGVRLHHRXXXXXXETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLL 348
           +NNI   GVRLHHR      ETGGALGGMVRQLSIDQFENEGRRVSYGTPE+ATAARKLL
Sbjct: 572 ANNIASGGVRLHHRAVVIAAETGGALGGMVRQLSIDQFENEGRRVSYGTPENATAARKLL 631

Query: 349 DRQMSINSVPKKV 361
           DRQMSINSVPKKV
Sbjct: 632 DRQMSINSVPKKV 644


>IMGA|Medtr4g067100.1 Serine/threonine-specific protein phosphatase
           and bis(5-nucleosyl)-tetraphosphatase
           chr04_pseudomolecule_IMGAG_V3 12922861-12934391 E
           EGN_Mt090430 20090702
          Length = 873

 Score =  383 bits (983), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 221/377 (58%), Positives = 246/377 (65%), Gaps = 22/377 (5%)

Query: 1   YATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVSF 60
           YATASARSDGLLLLCGGRDA+SVPLASAYGLAKHRDGRWEWAIAPGVSPS RYQHAAV  
Sbjct: 153 YATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFV 212

Query: 61  SYXXXXXXXXXXGNLISAGTIIISVC-------CIFRFLLMR--------DSMCLEVHLE 105
           +           G  +   +  ++V        C  + ++          D+   +  +E
Sbjct: 213 NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTTPRTGRYSADAAGGDASVE 272

Query: 106 AVGWXKIHPVLQAAVGDLIFIYGGLRG-GVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 164
            V   +      AAVGDLIFIYGGLRG G+                              
Sbjct: 273 LV---RRCRHAAAAVGDLIFIYGGLRGEGILLDDLLVAEDLAAAETTSAASHAAAAAAAS 329

Query: 165 NIHAGRIPGRYGFVDERTRQTMSEAVPDGAVVLGNPVAPPINGDMYTDISTENAMLPGPR 224
           ++  GR+PGRYGFVD+RT Q MS+A  DGAVVLGNPVAPP+NGDMYTDISTENA+L G R
Sbjct: 330 DVQMGRVPGRYGFVDDRTGQPMSDAAADGAVVLGNPVAPPVNGDMYTDISTENALLQGSR 389

Query: 225 RTSKGVEYLVXXXXXXXXXXXXXXXXXXXRQVNGEVELPDRDRGAEATPSGKQISTLIKP 284
           RTSKGVEYLV                   RQ NG VE PDRDRGAEATPSGKQIS++IKP
Sbjct: 390 RTSKGVEYLVEASAAEAEAISATLAAAKARQENGGVESPDRDRGAEATPSGKQISSMIKP 449

Query: 285 DSSGSNNIVPPGVRLHHRXXXXXXETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAA 344
           +  G N+    GVRLHHR      ETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAA
Sbjct: 450 EPGGPNS---GGVRLHHRAVVIAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAA 506

Query: 345 RKLLDRQMSINSVPKKV 361
           RKLLDRQMSINSVPKKV
Sbjct: 507 RKLLDRQMSINSVPKKV 523


>IMGA|Medtr1g111020.1 Serine/threonine-specific protein phosphatase
           and bis(5-nucleosyl)-tetraphosphatase
           chr01_pseudomolecule_IMGAG_V3 23521636-23513053 E
           EGN_Mt090430 20090702
          Length = 687

 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 43/58 (74%), Positives = 49/58 (84%)

Query: 1   YATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAV 58
           YATASARSDG+ LLCGGRD++  P A AYGL  HR+G WEW +APGVSPSPRYQHA+V
Sbjct: 53  YATASARSDGMFLLCGGRDSSGTPQADAYGLLMHRNGTWEWTLAPGVSPSPRYQHASV 110



 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 6/73 (8%)

Query: 267 RGAEATPSGKQISTLIKPDSSGSNNIVPPG------VRLHHRXXXXXXETGGALGGMVRQ 320
           +  +A  S     T +  D+S + + V  G      VRLH R      E  G LGG+VRQ
Sbjct: 275 QSVQAISSSPADETFVSDDNSHAADTVSDGSDTEGDVRLHPRAVVVAKEAVGNLGGLVRQ 334

Query: 321 LSIDQFENEGRRV 333
           LS+DQFENE RR+
Sbjct: 335 LSLDQFENESRRM 347