Jatropha Genome Database

JcCB0044181.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0044181.20 + phase: 0 /pseudo/partial
         (233 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g102720.1 GroEL-like chaperone, ATPase chr03_pseudomo...    94   5e-20
IMGA|Medtr2g015240.1 GroEL-like chaperone, ATPase chr02_pseudomo...    94   8e-20
IMGA|Medtr3g024690.1 Protein kinase; GroEL-like chaperone, ATPas...    85   4e-17
IMGA|Medtr4g136760.1 T-complex protein 1, alpha subunit chr04_ps...    84   4e-17
IMGA|Medtr7g139240.1 Protein kinase; GroEL-like chaperone, ATPas...    83   1e-16
IMGA|Medtr5g094680.1 GroEL-like chaperone, ATPase chr05_pseudomo...    75   2e-14
IMGA|Medtr6g030660.1 GroEL-like chaperone, ATPase chr06_pseudomo...    48   3e-06

>IMGA|Medtr3g102720.1 GroEL-like chaperone, ATPase
           chr03_pseudomolecule_IMGAG_V3 25119313-25123616 E
           EGN_Mt090430 20090702
          Length = 535

 Score = 94.4 bits (233), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 92/179 (51%), Gaps = 18/179 (10%)

Query: 18  ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIA 77
           A   NI+A K +  +L+T+LGPKG  KML    GD+ ++ DG T+L++M + N  A ++ 
Sbjct: 29  AQKANISAGKAVARILRTSLGPKGMDKMLQSPDGDVIISNDGATILEQMDVDNQIAKLMV 88

Query: 78  RTAVAQDDISGDGTTSTVIFIGELMKQSERYIDEGCFKFFVALNLIIGLLHCMHPRVLVD 137
             + +QD   GDGTT  V+  G L++Q+ER ++ G                 +HP  + +
Sbjct: 89  ELSRSQDYEIGDGTTGVVVLAGSLLEQAERLLERG-----------------IHPIRIAE 131

Query: 138 GFEVAKRATLQFLEKFKTPVIMGDEPDKEILKMVARTTLRTKLYEALADQLTDIVVNAV 196
           G+E+A R  ++ LEK       G E   E L     TTL +K+       L +I V AV
Sbjct: 132 GYEMASRIAVENLEKIANKFEFG-ETILEPLIQTCMTTLSSKIVNRCKRSLAEIAVKAV 189


>IMGA|Medtr2g015240.1 GroEL-like chaperone, ATPase
           chr02_pseudomolecule_IMGAG_V3 4079848-4084629 E
           EGN_Mt090430 20090702
          Length = 372

 Score = 93.6 bits (231), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 20/178 (11%)

Query: 20  HMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIART 79
           H NI A+K + D+++T LGP+  +KML+  +G I +T DGN +L+E+ I +P A  +   
Sbjct: 22  HANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDIAHPAAKSMIEL 81

Query: 80  AVAQDDISGDGTTSTVIFIGELMKQSERYIDEGCFKFFVALNLIIGLLHCMHPRVLVDGF 139
           +  QD+  GDGTTS +I  GE++  +E +ID+                   HP V+   +
Sbjct: 82  SRTQDEEVGDGTTSVIILAGEMLHVAEAFIDKN-----------------YHPTVICRAY 124

Query: 140 EVAKRATLQFLEKFKTPVIMGDEPDKEILKMVARTTLRTKLYEALADQLTDIVVNAVS 197
             A    +  ++K   P+   D  D+  +  + ++ + TK      D + D+ ++A +
Sbjct: 125 NKALEDAIAAIDKIAMPI---DAQDRGQMLGLVKSCIGTKFTSQFGDLIADLAIDATT 179


>IMGA|Medtr3g024690.1 Protein kinase; GroEL-like chaperone, ATPase
           chr03_pseudomolecule_IMGAG_V3 6286677-6281181 E
           EGN_Mt090430 20090702
          Length = 527

 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 30/211 (14%)

Query: 26  AKGLQDVLKTNLGPKGTIKML--VGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQ 83
           A  + D++KT LGPKG  K+L   G   ++ +T DG T+LK + I NP A ++   +  Q
Sbjct: 27  AMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQ 86

Query: 84  DDISGDGTTSTVIFIGELMKQSERYIDEGCFKFFVALNLIIGLLHCMHPRVLVDGFEVAK 143
           DD  GDGTTS V+  GEL++++E+          VA  +        HP  ++ GF +A 
Sbjct: 87  DDEVGDGTTSVVVLAGELLREAEK---------LVAAKI--------HPMTIIAGFRMAA 129

Query: 144 R-ATLQFLEKFKTPVIMGDEPDKEILKM----VARTTLRTKLYEALADQLTDIVVNAV-S 197
             A    +EK     ++ ++ D E  ++    +ARTTL +K+     +    + V+AV  
Sbjct: 130 ECARNALVEK-----VVDNKEDAEKFRLDLMNIARTTLSSKILSQDKEHFAKLAVDAVMR 184

Query: 198 LRTSVDFFFFQVFKGKSKICFKSIHSSG*IL 228
           L+ S +    Q+ K        S    G IL
Sbjct: 185 LKGSTNLESVQIIKKPGGSLIDSFLDEGFIL 215


>IMGA|Medtr4g136760.1 T-complex protein 1, alpha subunit
           chr04_pseudomolecule_IMGAG_V3 33500055-33491463 F
           EGN_Mt090430 20090702
          Length = 544

 Score = 84.3 bits (207), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 21/176 (11%)

Query: 22  NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAV 81
           N+ A + + +++KT+LGP G  KMLV   GD+ +T DG T+LK +++++P A ++   A 
Sbjct: 24  NVVACQAVANIVKTSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83

Query: 82  AQDDISGDGTTSTVIFIGELMKQSERYIDEGCFKFFVALNLIIGLLHCMHPRVLVDGFEV 141
            QD   GDGTTS VI   EL+K++   +                  + +HP  ++ G+ +
Sbjct: 84  LQDREVGDGTTSVVIVAAELLKRANDLV-----------------RNKIHPTSIISGYRL 126

Query: 142 AKRATLQFL-EKFKTPVIMGDEPDKEILKMVARTTLRTKLYEALADQLTDIVVNAV 196
           A R   +++ EK    V   ++  K+ L   A+T++ +KL    +D   ++VV AV
Sbjct: 127 AMREACKYVDEKLAVKV---EKLGKDSLINCAKTSMSSKLIAGDSDFFANLVVEAV 179


>IMGA|Medtr7g139240.1 Protein kinase; GroEL-like chaperone, ATPase
           chr07_pseudomolecule_IMGAG_V3 33258678-33264538 E
           EGN_Mt090430 20090702
          Length = 527

 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 30/195 (15%)

Query: 25  AAKGLQDVLKTNLGPKGTIKML--VGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVA 82
            A  + D++KT LGPKG  K+L   G   ++ +T DG T+LK + I NP A ++   +  
Sbjct: 26  GAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKV 85

Query: 83  QDDISGDGTTSTVIFIGELMKQSERYIDEGCFKFFVALNLIIGLLHCMHPRVLVDGFEVA 142
           QDD  GDGTTS V+  GEL++++E+          VA  +        HP  ++ GF +A
Sbjct: 86  QDDEVGDGTTSVVVLAGELLREAEK---------LVAAKI--------HPMTIIAGFRMA 128

Query: 143 KR-ATLQFLEKFKTPVIMGDEPDKEILKM----VARTTLRTKLYEALADQLTDIVVNAV- 196
              A    +EK     ++ ++ D E  +     +ARTTL +K+     +    + V+AV 
Sbjct: 129 AECARSALVEK-----VVDNKGDAEKFRSDLMNIARTTLSSKILSQDKEHFAKLAVDAVM 183

Query: 197 SLRTSVDFFFFQVFK 211
            L+ S +    Q+ K
Sbjct: 184 RLKGSTNLESVQIIK 198


>IMGA|Medtr5g094680.1 GroEL-like chaperone, ATPase
           chr05_pseudomolecule_IMGAG_V3 37476659-37485565 E
           EGN_Mt090430 20090702
          Length = 561

 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 90/177 (50%), Gaps = 20/177 (11%)

Query: 22  NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAV 81
           NINA   + DV++T LGP+G  K++    G + ++ DG T++K + I +P A ++   A 
Sbjct: 28  NINACTAVADVVRTTLGPRGMDKLIHDDKGSVTISNDGATIMKLLDIVHPAAKILVDIAK 87

Query: 82  AQDDISGDGTTSTVIFIGELMKQSERYIDEGCFKFFVALNLIIGLLHCMHPRVLVDGFEV 141
           +QD   GDGTT+ V+   E +++++ +I++G                 +H + L+  +  
Sbjct: 88  SQDSEVGDGTTTVVLLAAEFLREAKPFIEDG-----------------VHSQNLIRSYRT 130

Query: 142 AKRATLQFLEKFKTPVIMGD--EPDKEILKMVARTTLRTKLYEALADQLTDIVVNAV 196
           A    ++ +++     I G   E  K +L   A TTL +KL     +    +VV+AV
Sbjct: 131 AGSLAIEKVKELAVS-IEGKSLEEKKSLLGKCAATTLSSKLIGGEKEFFASMVVDAV 186


>IMGA|Medtr6g030660.1 GroEL-like chaperone, ATPase
           chr06_pseudomolecule_IMGAG_V3 6790236-6795758 E
           EGN_Mt090430 20090702
          Length = 525

 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 27/167 (16%)

Query: 41  GTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGE 100
           G  KM++     + +T D  T++ E+++Q+P A ++   + AQ +  GDG   T+ F GE
Sbjct: 24  GMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKILVLASKAQQEEIGDGANLTISFAGE 83

Query: 101 LMKQSERYIDEGCFKFFVALNLIIGLLHCMHPRVLVDGFEVAKRATLQFLEKFKTPVIMG 160
           L++ +E  I  G                 +HP  ++ G+  A   T++ L++    V  G
Sbjct: 84  LLQGAEELIRMG-----------------LHPSEIIIGYTKAINKTVEILDEL---VEEG 123

Query: 161 DEP----DKEILKMVARTTLRTKLYEALADQLTDIV--VNAVSLRTS 201
            E     DKE +    R  + +K +    D L  ++  VN   LR S
Sbjct: 124 SENMDVRDKEQVISRMRAAVASKQF-GQEDTLCSLIADVNISCLRAS 169