Jatropha Genome Database

JcCB0044081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0044081.10 - phase: 0 /pseudo/partial
         (502 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g113960.1 Eukaryotic pantothenate kinase chr03_pseudo...   531   e-151

>IMGA|Medtr3g113960.1 Eukaryotic pantothenate kinase
           chr03_pseudomolecule_IMGAG_V3 28749151-28738871 E
           EGN_Mt090430 20090702
          Length = 899

 Score =  531 bits (1369), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 263/314 (83%), Positives = 278/314 (88%), Gaps = 7/314 (2%)

Query: 196 SFDELLELSQRGDNRTIDMLVGDIYGGMDYSKIGLSASTIASSFGKTISDKKELEDYRPE 255
           SFDELLELSQ+GDNR IDMLVGDIYGG+DYSKIGLSASTIASSFGKTIS+KKEL+DYRPE
Sbjct: 279 SFDELLELSQKGDNRAIDMLVGDIYGGLDYSKIGLSASTIASSFGKTISEKKELQDYRPE 338

Query: 256 DISLSLLRMISYNIGQISYLNAXXXXXXXXXXXXXXXXXHAYTMDTISFAVHFWSKGEAQ 315
           DISLSLLRMISYNIGQI+YLNA                 HAYTMDT+SFAV +WS GEAQ
Sbjct: 339 DISLSLLRMISYNIGQIAYLNALRFKLKRIFFGGFFIRGHAYTMDTLSFAVQYWSNGEAQ 398

Query: 316 AMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEK-- 373
           AMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEK  
Sbjct: 399 AMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKAS 458

Query: 374 ----ISWMEKFVLKGTEITAPVPMAP-PGTTGLGGFEVPSSQGRTLRSDASALNVGVLHL 428
               ISWMEKF+ KGTEITAPVPM P  GTTGLGGFEVP S+G  LRSDASALNVGVLHL
Sbjct: 459 DKLHISWMEKFLQKGTEITAPVPMTPVAGTTGLGGFEVPLSKGSALRSDASALNVGVLHL 518

Query: 429 VPTLDVFPLLADPKMYEPNTIDLSDHKELEYWFTVLSEHMPDLVDKAVASEGGTDDAKRR 488
           VPTL+VFPLLADPK+YEPNTIDL+D  ELEYW T+LSEH+PDLVDKAVASEGGTDDAKRR
Sbjct: 519 VPTLEVFPLLADPKLYEPNTIDLADPSELEYWLTILSEHLPDLVDKAVASEGGTDDAKRR 578

Query: 489 GDAFARAFSAHLAR 502
           GDAFARAFSAHL+R
Sbjct: 579 GDAFARAFSAHLSR 592



 Score =  132 bits (331), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 62/73 (84%), Positives = 68/73 (93%)

Query: 1   MAGSLIKLVYFSRHEDRSINDKRKKTVKERLGISNGNRRSYPILGGRLHFVKFETRKINE 60
           + GSLIKLVYFSRHE +S +DKRKKT+KERLG+SNGNRRS+PILGGRLHFVKFET KINE
Sbjct: 79  IGGSLIKLVYFSRHEGQSDDDKRKKTLKERLGLSNGNRRSFPILGGRLHFVKFETGKINE 138

Query: 61  CLDFISSKQLHRG 73
           CLDFI SKQLHRG
Sbjct: 139 CLDFIHSKQLHRG 151