Jatropha Genome Database

JcCB0042151.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0042151.10 + phase: 0 
         (568 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g096120.1 GH3 auxin-responsive promoter chr02_pseudom...   286   3e-77
IMGA|Medtr5g016320.1 GH3 auxin-responsive promoter chr05_pseudom...   281   5e-76
IMGA|AC229702_10.1 GH3 auxin-responsive promoter AC229702.6 9316...   254   7e-68
IMGA|Medtr5g016310.1 GH3 auxin-responsive promoter chr05_pseudom...   220   2e-57
IMGA|Medtr8g040380.1 GH3 auxin-responsive promoter chr08_pseudom...   150   1e-36
IMGA|Medtr8g040370.1 GH3 auxin-responsive promoter chr08_pseudom...    62   7e-10
IMGA|Medtr5g016300.1 GH3 auxin-responsive promoter chr05_pseudom...    57   2e-08
IMGA|AC233100_39.1 hypothetical protein AC233100.6 133779-135143...    49   4e-06

>IMGA|Medtr2g096120.1 GH3 auxin-responsive promoter
           chr02_pseudomolecule_IMGAG_V3 22168384-22171476 E
           EGN_Mt090430 20090702
          Length = 607

 Score =  286 bits (731), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 178/582 (30%), Positives = 300/582 (51%), Gaps = 43/582 (7%)

Query: 3   DEELLQKLEDLTKDAVHHQLQTLCSILEHQAGVSYL-RPFLAGHHESIDAANFHRRVPLS 61
           +++ L  +ED+T  A   Q + L  IL   A V YL R  L GH    D+  F + +P+ 
Sbjct: 13  NKKTLDFIEDITTHADEIQKKVLAEILNRNANVEYLQRHGLNGH---TDSETFKKLLPII 69

Query: 62  CYDDYADHINRMANGELDHSEPVFSVDPLLCFFYSSGTSTMNPKLIPYFDSALSRAASYI 121
            Y+D  + IN +ANG+   + P+ + +P+  F  SSGTS    KL+P  +    R   Y+
Sbjct: 70  TYEDIQNDINLIANGD---TSPILTSNPISNFLTSSGTSGGERKLMPATEEEFGR--RYL 124

Query: 122 AHQGSSAIFRRLFPPKPEVNKILWFLYVDVTTTTRGGFKVMAASTYPFSKTSEVN--WSQ 179
            +     I  + F P  E  K ++ +++   + T GG K     T  +  +  +N  +  
Sbjct: 125 LYSYLMPIMSQ-FIPDLEKGKGMYLMFIKNESKTPGGIKASPVLTNYYKSSHFLNRPYDP 183

Query: 180 VLPCISPPEVLLGTDIENQMYCHLLCALRNSDLIDGIRAPYAIGIVKAFSLLESKWKQLC 239
                SP E +L  D    MY  LLC L  ++ +  + A +A G+++A   LE  W+ LC
Sbjct: 184 YTNFTSPNETVLCLDSYQSMYSQLLCGLIQNNEVLRVGAVFASGLIRAIRFLEKNWRLLC 243

Query: 240 DDLENGFLSTQVTNPAMRESVSNILDGPQPDLSKRFRSIFEEKNWNGIVSKLWCNVRYVK 299
           +D+  G L   +T+ ++RE+V  IL  P  +L+        + +W GI+++LW N +YV 
Sbjct: 244 NDIRTGTLDLLITDDSVREAVMKILK-PNKNLADFVEGECNKGSWQGIITRLWPNTKYVD 302

Query: 300 CVITGSMKQYYPKLKYYAGEIMILGGDYFASECPVGINLDIRQPPEATRFVMLPTAAYFE 359
            ++TG+M QY P L YY+  + ++   Y +SEC  G+NL+    P    + ++PT  Y+E
Sbjct: 303 VIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPLSKPCHVSYTLIPTMCYYE 362

Query: 360 FLPFDMNEQSVVS---------------EKAMTFSDVDVGKTYEVVVTTYRGLYRYRLGD 404
           FLP + +   V                 ++ +   DV +G+ YE+VVTTY GLYRY++GD
Sbjct: 363 FLPVNRSNCEVNGSIPPSTTKSLGEKKYQEVVDLVDVKLGQEYELVVTTYAGLYRYKVGD 422

Query: 405 IVRVVGFHNSSPEVEFVMRA-------PKTADEIITERDLISAMESLISVE--IIEFASF 455
           +++V GF N +P+  FV R            DE+  +  + +A+  L   E  + E+ S+
Sbjct: 423 VLKVTGFKNKAPQFSFVCRKNVVLSIESDKTDEVELQNAMKNAVTHLAPFEADVAEYTSY 482

Query: 456 LDLETSPKQLKVFIELR---EEKLQESIEALKKCCYSLEDGLGGIYKVERDKGK-IGPLS 511
            D  T P    ++ EL      K+  S+   + CC ++E+ L  +Y+  R   K IGPL 
Sbjct: 483 ADTTTIPGHYVLYWELNLKGSTKIPHSV--YEDCCLTIEESLNSVYRQGRVSDKSIGPLE 540

Query: 512 VYIVKPGSFNEILLVAVENGAPASQYKPPKIIRNRKIVDVME 553
           + IV+ G+F++++  A+  GA  +QYK P+ ++   +V+++E
Sbjct: 541 IKIVEQGTFDKLMDYAINLGASINQYKTPRCVKFAPMVELLE 582


>IMGA|Medtr5g016320.1 GH3 auxin-responsive promoter
           chr05_pseudomolecule_IMGAG_V3 5695839-5693541 F
           EGN_Mt090430 20090702
          Length = 600

 Score =  281 bits (719), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 180/580 (31%), Positives = 291/580 (50%), Gaps = 45/580 (7%)

Query: 3   DEELLQK----LEDLTKDAVHHQLQTLCSILEHQAGVSYLRPFLAGHHESIDAANFHRRV 58
           DE+ L K    +E++TK+    Q + L  ILE  A   YL+ F  G + + D   F  +V
Sbjct: 16  DEKSLNKALEFIEEMTKNTDSVQERVLSEILEQNAETEYLKRF--GLNGATDRETFKSKV 73

Query: 59  PLSCYDDYADHINRMANGELDHSEPVFSVDPLLCFFYSSGTSTMNPKLIPYFDSALSRAA 118
            +  Y+D    I R+ANG+     P+ S  P+  F  SSGTS    KL+P     + R  
Sbjct: 74  AVITYEDLLPDIQRIANGD---RSPILSAHPISEFLTSSGTSAGERKLMPTIHQEMDR-- 128

Query: 119 SYIAHQGSSAIFRRLFP------PKPEVNKILWFLYVDVTTTTRGGFKVMAASTYPFSKT 172
                     ++  L P      P  +  K L FL++   T T  G       T  + K+
Sbjct: 129 -------RQLLYSLLMPVMNQYVPDLDKGKALHFLFIKAETKTPSGLVARPVLT-AYYKS 180

Query: 173 SEVNWSQVLP---CISPPEVLLGTDIENQMYCHLLCALRNSDLIDGIRAPYAIGIVKAFS 229
            +       P     SP E +L  D    MY  +LC L     +  + A +A G+++A  
Sbjct: 181 EQFKKRPFDPYNVLTSPDEAILCPDSFQSMYTQMLCGLIMRHEVLRVGAVFASGLLRAIR 240

Query: 230 LLESKWKQLCDDLENGFLSTQVTNPAMRESVSNILDGPQPDLSKRFRSIFEEKNWNGIVS 289
            L+  W +L  D+E G L+ ++T+P++++ +S IL  P P+L+K         NW  I+ 
Sbjct: 241 FLQLNWAELVHDIETGTLNPKITDPSIKQCMSKILK-PNPELAKFVTKECSGDNWERIIP 299

Query: 290 KLWCNVRYVKCVITGSMKQYYPKLKYYAGEIMILGGDYFASECPVGINLDIRQPPEATRF 349
           ++W N +Y++ ++TG+M QY P L YY+G +      Y +SEC  G+NL     P    +
Sbjct: 300 RIWPNTKYLEVIVTGAMAQYIPTLDYYSGNLPKPCTMYASSECYFGLNLKPMTEPNEVSY 359

Query: 350 VMLPTAAYFEFLPFDMNEQSVVSE----KAMTFSDVDVGKTYEVVVTTYRGLYRYRLGDI 405
            ++P   YFEFLP D +    +S     K +  +DV +GK YE+V+TTY G  RYR+GDI
Sbjct: 360 TIMPNMGYFEFLPHDDSSPITLSRDSPPKLVDLADVQIGKFYELVITTYSGFCRYRVGDI 419

Query: 406 VRVVGFHNSSPEVEFVMR--------APKTAD-EIITERDLISAMESLISVEIIEFASFL 456
           ++V GFHNS P+ +FV R        + KT + E+    +  SA+       ++E+ SF 
Sbjct: 420 LQVNGFHNSDPQFKFVRRKNVLLSIDSDKTDESELQKAIENASALLKEFKTSVVEYTSFA 479

Query: 457 DLETSPKQLKVFIEL--REEKLQESIEALKKCCYSLEDGLGGIYKVER-DKGKIGPLSVY 513
           + ++ P    ++ EL  ++     + E L +CC  +E+ L  +Y+  R     IGPL + 
Sbjct: 480 ETKSIPGHYVIYWELLMKDSSCPPTDEVLNQCCLVMEESLNSVYRQGRVADNSIGPLEIR 539

Query: 514 IVKPGSFNEILLVAVENGAPASQYKPPKIIRNRKIVDVME 553
           +VK G+F E++  A+  GA  +QYK P+ +    I+++++
Sbjct: 540 VVKNGTFEELMDYAISRGASINQYKVPRCVSFTPIMELLD 579


>IMGA|AC229702_10.1 GH3 auxin-responsive promoter AC229702.6
           93167-91240 E EGN_Mt090430 20090702
          Length = 506

 Score =  254 bits (649), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 150/484 (30%), Positives = 251/484 (51%), Gaps = 35/484 (7%)

Query: 93  FFYSSGTSTMNPKLIPYFDSALSRAASYIAHQGSSAIFRRLFP------PKPEVNKILWF 146
            + SSGTS    KL+P  +  L R          S ++  L P      P  +  K ++F
Sbjct: 9   LYCSSGTSGGERKLMPTIEEDLER---------RSLLYSLLMPVMDQYVPNLDKGKGMYF 59

Query: 147 LYVDVTTTTRGGFKVMAASTYPFSKTSEVNWSQVLPCISPPEVLLGTDIENQMYCHLLCA 206
           L+      T  G       T  + K+S    ++     SP E +L  D    MY  +LC 
Sbjct: 60  LFTKSEAKTPAGLLARPVLT-SYYKSSHFIKNKTHEITSPIETILCLDFYQSMYSQILCG 118

Query: 207 LRNSDLIDGIRAPYAIGIVKAFSLLESKWKQLCDDLENGFLSTQVTNPAMRESVSNILDG 266
           L  ++ +  + A +A G ++A   LE  W  LC+D++ G ++ ++T+  +RESV  IL  
Sbjct: 119 LYQNEQVLRVGAVFASGFIRAIKFLEKHWVGLCNDIKTGTMNDEITDQGVRESVMKILK- 177

Query: 267 PQPDLSKRFRSIFEEKNWNGIVSKLWCNVRYVKCVITGSMKQYYPKLKYYAGEIMILGGD 326
           P P L+       ++K+W GI+++LW N +YV  ++TG+M QY P L YY+  + ++   
Sbjct: 178 PNPKLADFVELECKKKSWKGIITRLWPNSKYVDVIVTGTMSQYIPILDYYSNGLPLVCTM 237

Query: 327 YFASECPVGINLDIRQPPEATRFVMLPTAAYFEFLPF---DMNEQSVVS---EKAMTFSD 380
           Y +SEC  G+NL+    P    + ++PT AYFEFLP    D N  S+ +   E  +   D
Sbjct: 238 YASSECYFGLNLNPLCEPSEVSYTLVPTMAYFEFLPLNKIDANADSISATEQEHLVELVD 297

Query: 381 VDVGKTYEVVVTTYRGLYRYRLGDIVRVVGFHNSSPEVEFVMRA-------PKTADEIIT 433
           V++G+ YE+VVTTY GLYRYR+GDI+RV GF N +P+  F+ R            DE+  
Sbjct: 298 VELGQEYELVVTTYAGLYRYRVGDILRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVEL 357

Query: 434 ERDLISAMESL--ISVEIIEFASFLDLETSPKQLKVFIEL---REEKLQESIEALKKCCY 488
           +  + +    L   +V + ++ S  D  T P    ++ E+    +  +       ++CC+
Sbjct: 358 QTAVKNGSNHLSHYNVSLTDYTSCADASTIPGHYILYWEIIFDEQNPIPIPDSVFEECCF 417

Query: 489 SLEDGLGGIYKVERDKGKIGPLSVYIVKPGSFNEILLVAVENGAPASQYKPPKIIRNRKI 548
           ++ED L  +Y+  R    IGPL + +V+ G+F++++  A+  GA  +QYK P+ ++   I
Sbjct: 418 AVEDSLNSVYRQGRVTESIGPLEIKVVENGTFDKVMDFALSQGASINQYKTPRCVKYAPI 477

Query: 549 VDVM 552
           ++++
Sbjct: 478 IELL 481


>IMGA|Medtr5g016310.1 GH3 auxin-responsive promoter
           chr05_pseudomolecule_IMGAG_V3 5684990-5686351 E
           EGN_Mt090430 20090702
          Length = 387

 Score =  220 bits (560), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 117/367 (31%), Positives = 202/367 (55%), Gaps = 18/367 (4%)

Query: 199 MYCHLLCALRNSDLIDGIRAPYAIGIVKAFSLLESKWKQLCDDLENGFLSTQVTNPAMRE 258
           MY  +LC L     +  + A +A G+++A   L+  W QL  D+  G L+ ++T+P+++E
Sbjct: 1   MYTQMLCGLIMRHEVLRVGAIFASGLLRAIKFLQLNWAQLAHDISTGTLNPKITDPSIKE 60

Query: 259 SVSNILDGPQPDLSKRFRSIFEEKNWNGIVSKLWCNVRYVKCVITGSMKQYYPKLKYYAG 318
            +S IL  P P+ +         +NW  I+ ++W N +Y++ ++TG+M QY P L YY+G
Sbjct: 61  CMSKILK-PDPEQANFITKECSGENWERIIPRIWPNTKYLEVIVTGAMAQYIPTLDYYSG 119

Query: 319 EIMILGGDYFASECPVGINLDIRQPPEATRFVMLPTAAYFEFLPFDMNEQSVVSEKAMTF 378
            +      Y +SEC  G+NL     P    + ++P   YFEFLP D +   +V       
Sbjct: 120 NLPKPCTIYASSECYFGLNLKPMTEPNEVSYTIMPNMGYFEFLPLDESPPKLVD-----L 174

Query: 379 SDVDVGKTYEVVVTTYRGLYRYRLGDIVRVVGFHNSSPEVEFVMR--------APKTAD- 429
            DV++GK YE ++TTY GL RY++GDI++V GFHNS+P+ +FV R        + KT + 
Sbjct: 175 VDVEIGKFYEFIITTYSGLCRYKVGDILQVTGFHNSNPQFKFVRRKNVLLSIDSDKTDES 234

Query: 430 EIITERDLISAMESLISVEIIEFASFLDLETSPKQLKVFIEL--REEKLQESIEALKKCC 487
           E+    +  SA+       ++E+ SF + ++ P    ++ EL  ++     + E L +CC
Sbjct: 235 ELQKAIENASALLKEFKTSVVEYTSFAETKSIPGHYVIYWELLMKDSSCPPTDEVLNQCC 294

Query: 488 YSLEDGLGGIYKVER-DKGKIGPLSVYIVKPGSFNEILLVAVENGAPASQYKPPKIIRNR 546
             +E+ L  +Y+  R     IGPL + +VK G+F +++   +  GA  +QYK P+ +   
Sbjct: 295 LVMEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEDLMDYYISCGASINQYKVPRCVSLT 354

Query: 547 KIVDVME 553
            +V++++
Sbjct: 355 PVVELLD 361


>IMGA|Medtr8g040380.1 GH3 auxin-responsive promoter
           chr08_pseudomolecule_IMGAG_V3 8648867-8649948 E
           EGN_Mt090430 20090702
          Length = 291

 Score =  150 bits (380), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/283 (32%), Positives = 146/283 (51%), Gaps = 29/283 (10%)

Query: 267 PQPDLSKRF-RSIFEEKNWNGIVSKLWCNVRYVKCVITGSMKQYYPKLKYYAGEIMILGG 325
           P P+L+    +      NW G++ +L+ N +Y+  ++TGSM+ Y  KL++YAGE+ ++  
Sbjct: 7   PNPELADIIHKKCLGLNNWYGLLPELFPNAKYIYGIMTGSMEPYLGKLRHYAGELPLVTS 66

Query: 326 DYFASECPVGINLDIRQPPEATRFVMLPTAAYFEFLPFDM--NEQS--VVSEKAMTFSDV 381
            Y ASE  +  N++ + P E   +V+ P   YFEF+P     NE +   V    +  ++V
Sbjct: 67  IYGASEGFIAANINPKLPLELATYVLFPQNGYFEFIPLTQVKNEGTELCVDPHPVGLTEV 126

Query: 382 DVGKTYEVVVTTYRGLYRYRLGDIVRVVGFHNSSPEVEFVMRAPKTADEIITERDLISAM 441
            VG+ YE+V+T   GLYRYRLGD+V ++GF NS+ +++F+ R  +               
Sbjct: 127 KVGEEYEIVLTNSAGLYRYRLGDVVNIMGFSNSTLKLKFIRRKEE--------------- 171

Query: 442 ESLISVEIIEFASFLDLETSPKQLKVFIELREEKLQESIEALKKCCYSLEDGLGG-IYKV 500
                +E+IEF S +DL   P    +F E+  E    S E L KCC  L+       Y  
Sbjct: 172 -----LEVIEFTSHVDLSNEPGNYVIFWEISGEA---SEELLSKCCNCLDKSFTDPSYSF 223

Query: 501 ERDKGKIGPLSVYIVKPGSFNEILLVAVENGAPASQYKPPKII 543
            R    IG L + +V  G+F +IL   +  G   SQYK  + +
Sbjct: 224 SRKANTIGALELRVVGKGTFQKILDHYLGLGTSISQYKTARYL 266


>IMGA|Medtr8g040370.1 GH3 auxin-responsive promoter
           chr08_pseudomolecule_IMGAG_V3 8648135-8648676 E
           EGN_Mt090430 20090702
          Length = 128

 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 7/130 (5%)

Query: 4   EELLQKLEDLTKDAVHHQLQTLCSILEHQAGVSYLRPFLAGHHESIDAANFHRRVPLSCY 63
           ++ +Q+ E L+ DA   Q+ TL  ILE  A   YL+    G +   D  +F   VPL  +
Sbjct: 2   DKFIQEFEALSTDAEKVQMNTLKRILEDNASAQYLQNL--GLNGKTDPESFKACVPLVTH 59

Query: 64  DDYADHINRMANGELDHSEPVFSVDPLLCFFYSSGTSTMNPKLIPYFDSALSRAASYIAH 123
            D   +INR+ +G+   + P+ +  P+     SSGT+   PK IP+ D           H
Sbjct: 60  KDSEPYINRIIDGD---ASPILTTKPITAMSLSSGTTQRKPKYIPWNDEVFETTVQ--IH 114

Query: 124 QGSSAIFRRL 133
           Q   A  +++
Sbjct: 115 QAFFAYLKQV 124


>IMGA|Medtr5g016300.1 GH3 auxin-responsive promoter
           chr05_pseudomolecule_IMGAG_V3 5683959-5684988 F
           EGN_Mt090430 20090702
          Length = 184

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 14/153 (9%)

Query: 10  LEDLTKDAVHHQLQTLCSILEHQAGVSYLRPFLAGHHESIDAANFHRRVPLSCYDDYADH 69
           +E++TK+   +Q + L  IL   A   YL  F  G + + D   F  +V +  Y+D    
Sbjct: 27  IEEMTKNTDSNQERVLAEILAQNAETEYLNRF--GLNGATDRETFKSKVAVITYEDLIPD 84

Query: 70  INRMANGELDHSEPVFSVDPLLCFFYSSGTSTMNPKLIPYFDSALSRA---ASYIAHQGS 126
           I R+A G+   + P+    P+  F  SSGTS    KL+P     + R     S I     
Sbjct: 85  IQRIAKGD---TSPILCAHPISEFLTSSGTSAGERKLMPTIHQEMDRRLLLCSLI----- 136

Query: 127 SAIFRRLFPPKPEVNKILWFLYVDVTTTTRGGF 159
           + +  + + P  +  K L FL++   T T  G 
Sbjct: 137 TPVMNQ-YVPNLDKGKALHFLFIKAETKTPSGL 168


>IMGA|AC233100_39.1 hypothetical protein AC233100.6 133779-135143 E
           EGN_Mt090430 20090702
          Length = 244

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 319 EIMILGGDYFASECPVGINLDIRQPPEATRFVMLPTAAYFEFLPF-DMNEQSV---VSEK 374
           E+ ++   Y ASE  +  N++ + PPE   + + P   YFEF+P   +N          +
Sbjct: 161 ELPLVTSIYGASEGFIAANVNPKLPPEFATYAVFPQNGYFEFIPLTQLNNDGTFLCADPQ 220

Query: 375 AMTFSDVDVGKTYEVVVTTYRGLY 398
            M  ++V VGK YE+VVT   G Y
Sbjct: 221 PMGLTEVKVGKEYEIVVTNSAGKY 244