Jatropha Genome Database

JcCB0042121.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0042121.10 + phase: 0 /partial
         (434 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g045830.1 Argininosuccinate synthase chr05_pseudomole...   588   e-168
IMGA|Medtr8g109450.1 Argininosuccinate synthase chr08_pseudomole...   575   e-164
IMGA|Medtr3g117420.1 Argininosuccinate synthase chr03_pseudomole...   525   e-149
IMGA|Medtr3g117380.1 Argininosuccinate synthase chr03_pseudomole...   135   4e-32
IMGA|Medtr3g117390.1 Argininosuccinate synthase chr03_pseudomole...   125   3e-29

>IMGA|Medtr5g045830.1 Argininosuccinate synthase
           chr05_pseudomolecule_IMGAG_V3 19231661-19226013 E
           EGN_Mt090430 20090702
          Length = 480

 Score =  588 bits (1517), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 279/332 (84%), Positives = 300/332 (90%)

Query: 61  RDIIRTSRSKAIQAVLSSDTEVETHEATKRKGLRGHLNKVVLAYSGGLDTSVIVPWLREN 120
           R  +  +R + ++AVL SDT+VE  EA K  GLRG LNKVVLAYSGGLDTSVIVPWLREN
Sbjct: 46  RTSVDATRLQVVKAVLRSDTDVEVSEAKKGSGLRGKLNKVVLAYSGGLDTSVIVPWLREN 105

Query: 121 YGCEVVCFTADVGQXXXXXXXXXXXXXXSGACQLVVKDLQEEFVKDYIFPCLRAGAIYER 180
           YGC+VVCFTADVGQ              SGA QLVVKDL+EEFVKDY+FPCLRAGAIYER
Sbjct: 106 YGCDVVCFTADVGQGIKELDGLEAKAKSSGASQLVVKDLKEEFVKDYVFPCLRAGAIYER 165

Query: 181 KYLLGTSMARPVIAKAMVDVAKEVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPW 240
           KYLLGTSMARPVIAKAMVDVAKEVGADAV+HGCTGKGNDQVRFELTFFALNP+LN+VAPW
Sbjct: 166 KYLLGTSMARPVIAKAMVDVAKEVGADAVSHGCTGKGNDQVRFELTFFALNPKLNIVAPW 225

Query: 241 REWDIKGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDPTNEPKKDMYMM 300
           REWDI GREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP NEPKKDMYMM
Sbjct: 226 REWDITGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDPANEPKKDMYMM 285

Query: 301 SVDPEDAPNQPEYVEIGIESGIPVSVNGKKLSPASLLSELNDIGGRHGVGRIDMVENRLV 360
           SVDPEDAP+Q EY+EIGIESG+PVS+NGK LSPASLL+ELN+IGGRHG+GRIDMVENRLV
Sbjct: 286 SVDPEDAPDQAEYLEIGIESGLPVSLNGKTLSPASLLAELNEIGGRHGIGRIDMVENRLV 345

Query: 361 GMKSRGVYETPGGTILYSAARELESLTLDRET 392
           GMKSRGVYETPGGTIL++AARELESLTLDRET
Sbjct: 346 GMKSRGVYETPGGTILFAAARELESLTLDRET 377


>IMGA|Medtr8g109450.1 Argininosuccinate synthase
           chr08_pseudomolecule_IMGAG_V3 24532274-24527719 E
           EGN_Mt090430 20090702
          Length = 485

 Score =  575 bits (1481), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 275/336 (81%), Positives = 296/336 (88%), Gaps = 7/336 (2%)

Query: 64  IRTSRSKAIQAVLSSDTEVETHEATKRKGLRGHLNKVVLAYSGGLDTSVIVPWLRENYGC 123
           +   R + ++AV  SDT+VE  EA K  GLRG LNKVVLAYSGGLDTSVIVPWLRENYGC
Sbjct: 47  VAAGRLQVVKAVSHSDTDVEVSEAKKGSGLRGKLNKVVLAYSGGLDTSVIVPWLRENYGC 106

Query: 124 EVVCFTADVGQXXXXXXXXXXXXXXSGACQLVVKDLQEEFVKDYIFPCLRAGAIYERKYL 183
           +VVCFTADVGQ              SGA QLVVKDL+EEFVKDY+FPCLRAGAIYERKYL
Sbjct: 107 DVVCFTADVGQGIKELDGLEAKAKASGASQLVVKDLKEEFVKDYVFPCLRAGAIYERKYL 166

Query: 184 LGTSMARPVIAKAMVDVAKEVGADAVAHGCTGKGNDQ-------VRFELTFFALNPELNV 236
           LGTSMARPVIAKAMVDVAKEVGADAV+HGCTGKGNDQ       VRFELTFFALNP+LN+
Sbjct: 167 LGTSMARPVIAKAMVDVAKEVGADAVSHGCTGKGNDQACLLTIIVRFELTFFALNPKLNI 226

Query: 237 VAPWREWDIKGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDPTNEPKKD 296
           VAPWREWDI GREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP NEPKKD
Sbjct: 227 VAPWREWDITGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDPANEPKKD 286

Query: 297 MYMMSVDPEDAPNQPEYVEIGIESGIPVSVNGKKLSPASLLSELNDIGGRHGVGRIDMVE 356
           MYMMSVDPEDAP+Q EY+EIGIESG+PVS+NGK LSPA+LL+ELN+IGG+HG+GRIDMVE
Sbjct: 287 MYMMSVDPEDAPDQAEYLEIGIESGLPVSLNGKTLSPATLLAELNEIGGKHGIGRIDMVE 346

Query: 357 NRLVGMKSRGVYETPGGTILYSAARELESLTLDRET 392
           NRLVGMKSRGVYETPGGTIL+ AARELESLTLDRET
Sbjct: 347 NRLVGMKSRGVYETPGGTILFKAARELESLTLDRET 382


>IMGA|Medtr3g117420.1 Argininosuccinate synthase
           chr03_pseudomolecule_IMGAG_V3 29572018-29568254 E
           EGN_Mt090430 20090702
          Length = 465

 Score =  525 bits (1352), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 265/394 (67%), Positives = 307/394 (77%), Gaps = 34/394 (8%)

Query: 1   MAQLKALSPYSSLNL--TFHGPKRDVLQHNFKVSSNAKPTISLLRLGAKRSDLQGDELVV 58
           MAQL A+  YSS  +  T H  K  +L H F     AKP+ SL  L  +RS         
Sbjct: 1   MAQLNAILTYSSPAIAPTKHA-KEHLLHHRF---CQAKPS-SLRELSPRRS--------- 46

Query: 59  NARDIIRTSRSKAIQAVLSSDTEVETHEATKRKGLRGHLNKVVLAYSGGLDTSVIVPWLR 118
                   S+ + I+AVL  D  VE  E  K  GL+G LNKVVLAYSGGLDTSV+VPWLR
Sbjct: 47  ----FGAASKPQVIKAVLYKD--VEISETKKVAGLKGKLNKVVLAYSGGLDTSVVVPWLR 100

Query: 119 ENYGCEVVCFTADVGQXXXXXXXXXXXXXXSGACQLVVKDLQEEFVKDYIFPCLRAGAIY 178
           ENYGC+VVCFTAD+GQ              SGA QLVVKDL+EEFV+DY+FPCLRAGAIY
Sbjct: 101 ENYGCDVVCFTADLGQGASELEGLEEKAKASGASQLVVKDLKEEFVRDYVFPCLRAGAIY 160

Query: 179 ERKYLLGTSMARPVIAKAMVDVAKEVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVA 238
           ERKYLLGT++ARPVIAKAMVD+A EVGADAV            RFEL+FFALNP+LNVVA
Sbjct: 161 ERKYLLGTAIARPVIAKAMVDIANEVGADAV------------RFELSFFALNPKLNVVA 208

Query: 239 PWREWDIKGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDPTNEPKKDMY 298
           PWREWDI GREDAIEYAKKH+VPVPVTKKSIYSRDRNLWH++HEGD+LEDP NEPKKDMY
Sbjct: 209 PWREWDITGREDAIEYAKKHDVPVPVTKKSIYSRDRNLWHITHEGDVLEDPANEPKKDMY 268

Query: 299 MMSVDPEDAPNQPEYVEIGIESGIPVSVNGKKLSPASLLSELNDIGGRHGVGRIDMVENR 358
           M++VDPEDAPN+PEYVEIG E GIPVS+NGK+LSP +L++ELN+IGGRHG+GR+D+VE+R
Sbjct: 269 MLTVDPEDAPNEPEYVEIGFELGIPVSLNGKRLSPGNLVAELNEIGGRHGIGRVDLVEDR 328

Query: 359 LVGMKSRGVYETPGGTILYSAARELESLTLDRET 392
           +VGMKSRGVYETPGGTIL++AAR+LE+LTLDRET
Sbjct: 329 IVGMKSRGVYETPGGTILFTAARDLETLTLDRET 362


>IMGA|Medtr3g117380.1 Argininosuccinate synthase
           chr03_pseudomolecule_IMGAG_V3 29562199-29561526 E
           EGN_Mt090430 20090702
          Length = 152

 Score =  135 bits (340), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 61/80 (76%), Positives = 75/80 (93%)

Query: 313 YVEIGIESGIPVSVNGKKLSPASLLSELNDIGGRHGVGRIDMVENRLVGMKSRGVYETPG 372
           YVEIG ESGIPV+VNGK+LSP +L++ELN+IGGRHG+G +D+VEN +VG+KSRGVYETPG
Sbjct: 10  YVEIGFESGIPVTVNGKRLSPGNLVAELNEIGGRHGIGCVDIVENHIVGLKSRGVYETPG 69

Query: 373 GTILYSAARELESLTLDRET 392
           GTI ++AAR+LESLTLDRET
Sbjct: 70  GTIFFTAARDLESLTLDRET 89


>IMGA|Medtr3g117390.1 Argininosuccinate synthase
           chr03_pseudomolecule_IMGAG_V3 29562843-29562403 E
           EGN_Mt090430 20090702
          Length = 72

 Score =  125 bits (315), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 65/69 (94%), Gaps = 1/69 (1%)

Query: 244 DIKGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDPTNEPKKDMYMMSVD 303
           DI GREDAIEYAKKHNVP+P+TKKSIYSRDRNLWH++H GD+LED  NEPKKD+YM++VD
Sbjct: 5   DITGREDAIEYAKKHNVPIPITKKSIYSRDRNLWHINH-GDVLEDSANEPKKDIYMLTVD 63

Query: 304 PEDAPNQPE 312
           PEDAPNQP+
Sbjct: 64  PEDAPNQPD 72