Jatropha Genome Database

JcCB0041981.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0041981.10 + phase: 0 /partial
         (323 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g146470.1 Formate-tetrahydrofolate ligase, FTHFS chr0...   546   e-156
IMGA|Medtr2g132840.1 Formate-tetrahydrofolate ligase, FTHFS chr0...   500   e-142
IMGA|Medtr5g064840.1 Formate-tetrahydrofolate ligase, FTHFS chr0...   500   e-142

>IMGA|Medtr1g146470.1 Formate-tetrahydrofolate ligase, FTHFS
           chr01_pseudomolecule_IMGAG_V3 32386595-32382177 E
           EGN_Mt090430 20090702
          Length = 699

 Score =  546 bits (1407), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 261/318 (82%), Positives = 282/318 (88%)

Query: 6   RKLQVVSPVPADIDIANSVEPFHISEIAKDLNLSPNHYDLYGKYKAKVLLSALDELEGSP 65
           RKL VVSPVP+DIDIANSV+P HISEIA  LNL+PNHYDLYGKYKAKVLLSALDEL+ S 
Sbjct: 71  RKLDVVSPVPSDIDIANSVQPIHISEIANHLNLTPNHYDLYGKYKAKVLLSALDELQESK 130

Query: 66  DGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXX 125
           DGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTC+RQPSQGPTFGIK      
Sbjct: 131 DGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCIRQPSQGPTFGIKGGAAGG 190

Query: 126 XYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRIFHESSQSDKALFNRLCLPNKEGK 185
            YSQVIPMDEFNLHLTGDIH               RIFHES+QSDKALFNRLC PNKEGK
Sbjct: 191 GYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHESTQSDKALFNRLCPPNKEGK 250

Query: 186 RTFSDIMFRRLKKLGISKTKPEELTAQEIKKFARLDIDPNSITWRRVMDVNDRFLRKITV 245
           R+FSD+MFRRLKK GISKT P++LT +E+ KFARLDIDP+SITWRRVMD+NDRFLRKITV
Sbjct: 251 RSFSDVMFRRLKKFGISKTNPDDLTPEEVNKFARLDIDPDSITWRRVMDINDRFLRKITV 310

Query: 246 GQGPEEKGMLRETGFDISVASEIMAVLALTTSLADMRERLGNMVVGNSKAGDPITADDLG 305
           GQGP+EKGM+RET FDISVASEIMAVLALTTSL DMRERLG MV+GNSK+GDP+TADDLG
Sbjct: 311 GQGPDEKGMVRETAFDISVASEIMAVLALTTSLTDMRERLGKMVIGNSKSGDPVTADDLG 370

Query: 306 VGGALTVLMKDAINPTLM 323
           +GGALTVLMKDAI+PTLM
Sbjct: 371 IGGALTVLMKDAIHPTLM 388


>IMGA|Medtr2g132840.1 Formate-tetrahydrofolate ligase, FTHFS
           chr02_pseudomolecule_IMGAG_V3 32376549-32372121 E
           EGN_Mt090430 20090702
          Length = 681

 Score =  500 bits (1288), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 246/318 (77%), Positives = 265/318 (83%), Gaps = 18/318 (5%)

Query: 6   RKLQVVSPVPADIDIANSVEPFHISEIAKDLNLSPNHYDLYGKYKAKVLLSALDELEGSP 65
           RKL VVSPVP+DIDIANSV+P HISEIA  LNL+PNHYDLYGKYKAKVLLSALDEL+ S 
Sbjct: 71  RKLDVVSPVPSDIDIANSVQPIHISEIANHLNLTPNHYDLYGKYKAKVLLSALDELQESK 130

Query: 66  DGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXX 125
           DGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTC+RQPSQGPTFGIK      
Sbjct: 131 DGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCIRQPSQGPTFGIKGGAAGG 190

Query: 126 XYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRIFHESSQSDKALFNRLCLPNKEGK 185
            YSQVIPMDEFNLHLTGDIH               RIFHES+QSDKALFN          
Sbjct: 191 GYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHESTQSDKALFN---------- 240

Query: 186 RTFSDIMFRRLKKLGISKTKPEELTAQEIKKFARLDIDPNSITWRRVMDVNDRFLRKITV 245
                   RRLKK GISKT P++LT +E+ KFARLDIDP+SITWRRVMD+NDRFLRKITV
Sbjct: 241 --------RRLKKFGISKTNPDDLTPEEVNKFARLDIDPDSITWRRVMDINDRFLRKITV 292

Query: 246 GQGPEEKGMLRETGFDISVASEIMAVLALTTSLADMRERLGNMVVGNSKAGDPITADDLG 305
           GQGP+EKGM+RET FDISVASEIMAVLALTTSL DMRERLG MV+GNSK+GDP+TADDLG
Sbjct: 293 GQGPDEKGMVRETAFDISVASEIMAVLALTTSLTDMRERLGKMVIGNSKSGDPVTADDLG 352

Query: 306 VGGALTVLMKDAINPTLM 323
           +GGALTVLMKDAI+PTLM
Sbjct: 353 IGGALTVLMKDAIHPTLM 370


>IMGA|Medtr5g064840.1 Formate-tetrahydrofolate ligase, FTHFS
           chr05_pseudomolecule_IMGAG_V3 22553092-22548664 E
           EGN_Mt090430 20090702
          Length = 681

 Score =  500 bits (1288), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 246/318 (77%), Positives = 265/318 (83%), Gaps = 18/318 (5%)

Query: 6   RKLQVVSPVPADIDIANSVEPFHISEIAKDLNLSPNHYDLYGKYKAKVLLSALDELEGSP 65
           RKL VVSPVP+DIDIANSV+P HISEIA  LNL+PNHYDLYGKYKAKVLLSALDEL+ S 
Sbjct: 71  RKLDVVSPVPSDIDIANSVQPIHISEIANHLNLTPNHYDLYGKYKAKVLLSALDELQESK 130

Query: 66  DGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXX 125
           DGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTC+RQPSQGPTFGIK      
Sbjct: 131 DGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCIRQPSQGPTFGIKGGAAGG 190

Query: 126 XYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRIFHESSQSDKALFNRLCLPNKEGK 185
            YSQVIPMDEFNLHLTGDIH               RIFHES+QSDKALFN          
Sbjct: 191 GYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHESTQSDKALFN---------- 240

Query: 186 RTFSDIMFRRLKKLGISKTKPEELTAQEIKKFARLDIDPNSITWRRVMDVNDRFLRKITV 245
                   RRLKK GISKT P++LT +E+ KFARLDIDP+SITWRRVMD+NDRFLRKITV
Sbjct: 241 --------RRLKKFGISKTNPDDLTPEEVNKFARLDIDPDSITWRRVMDINDRFLRKITV 292

Query: 246 GQGPEEKGMLRETGFDISVASEIMAVLALTTSLADMRERLGNMVVGNSKAGDPITADDLG 305
           GQGP+EKGM+RET FDISVASEIMAVLALTTSL DMRERLG MV+GNSK+GDP+TADDLG
Sbjct: 293 GQGPDEKGMVRETAFDISVASEIMAVLALTTSLTDMRERLGKMVIGNSKSGDPVTADDLG 352

Query: 306 VGGALTVLMKDAINPTLM 323
           +GGALTVLMKDAI+PTLM
Sbjct: 353 IGGALTVLMKDAIHPTLM 370