Jatropha Genome Database

JcCB0041831.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0041831.10 - phase: 0 /partial
         (258 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g015480.1 Alpha/beta hydrolase fold chr07_pseudomolec...    59   2e-09
IMGA|Medtr7g032300.1 Alpha/beta hydrolase fold chr07_pseudomolec...    54   7e-08
IMGA|Medtr2g033450.1 Peptidase S10, serine carboxypeptidase chr0...    52   4e-07

>IMGA|Medtr7g015480.1 Alpha/beta hydrolase fold
           chr07_pseudomolecule_IMGAG_V3 3912005-3917479 E
           EGN_Mt090430 20090702
          Length = 380

 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 90/226 (39%), Gaps = 44/226 (19%)

Query: 2   AGPTILFFQENAGNIAHRLEMVRIMIQRLHCNVFMLSYRGYGASDGYPSQHGIAKDAQAA 61
           A  TIL+   NA ++    E+   +   L  N+    Y GYG S G PS+     D +AA
Sbjct: 67  ASLTILYSHGNAADLGQMYELFSELSIHLRVNLLCYDYSGYGQSSGKPSEQNTYADIEAA 126

Query: 62  LDYLTQRTDIDSSRIVVFGRSLGGAVGALLTKNNPDKVAGLILENTFTSILDMAGVLLPF 121
              L +        I+++G+S+G      L    P+ +  +IL    + IL    V+ P 
Sbjct: 127 YKCLVEMYGSKEEDIILYGQSVGSGPTTDLAARLPN-LRAVILH---SPILSGLRVMYPV 182

Query: 122 LK--WFIGSNHSKGPKILNFLVRSPWSTVDVIGQVKQPVLFLSGLQDEMVPPSHMQMLYA 179
            +  WF                   +  +D I  V  PVL + G  D++V  SH + L+ 
Sbjct: 183 KRTYWF-----------------DIYKNIDKIPMVNCPVLVIHGTADDVVDCSHGKQLW- 224

Query: 180 KAAAHNKECIFVEFPTGMHMDTWLAGGD--------QYWKTIQDFL 217
               H KE          +   W+ GG+        QY K ++ F+
Sbjct: 225 ---EHCKE---------KYEPLWVKGGNHCDLELYPQYIKHLKKFI 258


>IMGA|Medtr7g032300.1 Alpha/beta hydrolase fold
           chr07_pseudomolecule_IMGAG_V3 7997105-7994318 E
           EGN_Mt090430 20090702
          Length = 363

 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 79/212 (37%), Gaps = 40/212 (18%)

Query: 1   IAGPTILFFQENAGNIAHRLEMVRIMIQRLHCNVFMLSYRGYGASDGYPSQHGIAKDAQA 60
           +A  T+L+   NA ++    E+   +   L  N+    Y GYG S G PS+     D +A
Sbjct: 59  MATSTLLYSHGNAADLGQMYELFIELSIHLRVNLMGYDYSGYGQSSGKPSEQNTYSDIEA 118

Query: 61  ALDYLTQRTDIDSSRIVVFGRSLGGAVGALLTKNNPDKVAGLILENTFTSILDMAGVLLP 120
               L +        I+++G+S+G                           LD+A  L  
Sbjct: 119 VYKCLEESFGAKQEDIILYGQSVGSG-----------------------PTLDLAARLPQ 155

Query: 121 FLKWFIGSNHSKGPKILNFLVRSPW----STVDVIGQVKQPVLFLSGLQDEMVPPSHMQM 176
                + S    G +++  + RS W      +D I  V  PVL + G  DE+V  SH + 
Sbjct: 156 LRAVVLHSPILSGLRVMYPVKRSYWFDIYKNIDKIPLVNCPVLIVHGTSDEVVDCSHGKQ 215

Query: 177 LYAKAAAHNKECIFVEFPTGMHMDTWLAGGDQ 208
           L+             E     +   WL GG+ 
Sbjct: 216 LW-------------ELCKEKYEPLWLKGGNH 234


>IMGA|Medtr2g033450.1 Peptidase S10, serine carboxypeptidase
           chr02_pseudomolecule_IMGAG_V3 9117692-9113213 H
           EGN_Mt090430 20090702
          Length = 526

 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 31/207 (14%)

Query: 1   IAGPTILFFQENAGNIAHRLEMVRIMIQRLHCNVFMLSYRGYGASDGYPSQHG--IAKDA 58
           I+ P +++   N+G      E   +++   +  VF L + G G SDG     G     D 
Sbjct: 129 ISLPCVIYCHGNSGCRVDANEAAVVLLPS-NITVFTLDFSGSGLSDGDHVSLGWHEKDDL 187

Query: 59  QAALDYLTQRTDIDSSRIVVFGRSLGGAVGALLTKNNPDKVAGLILENTFTSI------- 111
           +  + YL  R++   SRI ++GRS+G     L    +P  +AGL+L++ F+++       
Sbjct: 188 KMVVSYL--RSNKQVSRIGLWGRSMGAVTSLLYGAEDP-SIAGLVLDSAFSNLYDLMMEL 244

Query: 112 LDMAGVLLP---------FLKWFIGSNHSKGPKILNFLVRSPWSTVDVIGQVKQPVLFLS 162
           +D+  + LP         +++  I          LN L  +P + +        PVLF  
Sbjct: 245 VDVYKIRLPKFTLKMVVQYMRRVIEKKAKFDIMDLNCLQAAPKTFI--------PVLFGH 296

Query: 163 GLQDEMVPPSHMQMLYAKAAAHNKECI 189
           G  D+ V P H  ++ A++ A +K  I
Sbjct: 297 GNDDDFVQPHHSDLI-AESYAGDKNII 322