Jatropha Genome Database

JcCB0041791.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0041791.20 - phase: 0 
         (191 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC146557_15.1 Protein of unknown function DUF1279 AC146557....   209   6e-55

>IMGA|AC146557_15.1 Protein of unknown function DUF1279 AC146557.33
           83480-81882 E EGN_Mt090430 20090702
          Length = 188

 Score =  209 bits (533), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 116/181 (64%), Positives = 137/181 (75%), Gaps = 5/181 (2%)

Query: 12  CAAFSSNKNLNK-CCFGSVEARKSSFRSFKARAIKEKTEERKNPQXXXXXXAEEIAKKYG 70
           CA+F SNK  ++ C   S+++RKS+ +  + RA+KEKTEE K+         EE+ KKYG
Sbjct: 12  CASFLSNKKSSRFCSLASIQSRKSNVKVLRVRAVKEKTEEIKS--SSKQSSPEEVTKKYG 69

Query: 71  LEAGLWKIFSTKEEQDGEEKKSKGEQAKELLAKYGGAYXXXXXXXXXXXXXXCYALISAG 130
           LEAGLWKIFS+KEE  G+++KSKG+QAKELLAKYGGAY              CY LI+AG
Sbjct: 70  LEAGLWKIFSSKEE--GDQQKSKGDQAKELLAKYGGAYLATSITLSLISFALCYVLINAG 127

Query: 131 IDVQALLQKVGISTDEAGEKVGTFALAYAAHKAASPIRFPPTVALTPVVASWIGKKVDQD 190
           +DVQ LLQKVGISTD  GEKVGTFALAYAAHKAASPIRFPPTVALTP+VA WIGKK D+D
Sbjct: 128 VDVQTLLQKVGISTDATGEKVGTFALAYAAHKAASPIRFPPTVALTPIVAGWIGKKADKD 187

Query: 191 K 191
           K
Sbjct: 188 K 188