Jatropha Genome Database

JcCB0037821.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0037821.10 + phase: 0 /partial
         (249 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g083370.1 Ribose-phosphate pyrophosphokinase chr05_ps...   408   e-114
IMGA|Medtr5g034640.1 Ribose-phosphate pyrophosphokinase chr05_ps...   377   e-105
IMGA|Medtr5g034640.2 Ribose-phosphate pyrophosphokinase chr05_ps...   309   1e-84
IMGA|Medtr8g103080.1 Phosphoribosyltransferase chr08_pseudomolec...    55   4e-08

>IMGA|Medtr5g083370.1 Ribose-phosphate pyrophosphokinase
           chr05_pseudomolecule_IMGAG_V3 31623817-31618259 E
           EGN_Mt090430 20090702
          Length = 321

 Score =  408 bits (1049), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 193/235 (82%), Positives = 219/235 (93%), Gaps = 1/235 (0%)

Query: 16  VHLFYCVECEDLARKVAAHSEL-ITLRSINWRNFDDGFPNLYINDAHDIRGQHVAFLAAF 74
           V+LFY ++CE+LA KVA+HS+  ITL++I WR+F DGFPN++IN+A ++RGQHVAFLA+F
Sbjct: 11  VNLFYSLDCEELANKVASHSQTNITLQNIKWRSFADGFPNIFINNAEELRGQHVAFLASF 70

Query: 75  SSPGVIFEQLSVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPI 134
           SSP  +FEQLSVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFT+AR+LSNIPI
Sbjct: 71  SSPAQVFEQLSVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTLARMLSNIPI 130

Query: 135 SRGGPTSLVIYDIHALQERFYFGDHVLPLFETGIPLLKQRLHQLPDSDKIVVAFPDDGAW 194
           SRGGPTSLVIYDIHALQERFYFGD VLPLFETGIPLLKQRL QLPD+D +V+AFPDDGAW
Sbjct: 131 SRGGPTSLVIYDIHALQERFYFGDEVLPLFETGIPLLKQRLLQLPDADNVVIAFPDDGAW 190

Query: 195 KRFHKLLDHFPMVVCTKVREGDKRIVRLKEGNPAGCHVVIVDDLVQSGGTLIECQ 249
           KRFHKL D++ +VVCTKVREGDKRIVRLKEG+ +G HVVIVDDLVQSGGTLIECQ
Sbjct: 191 KRFHKLFDNYSVVVCTKVREGDKRIVRLKEGHVSGHHVVIVDDLVQSGGTLIECQ 245


>IMGA|Medtr5g034640.1 Ribose-phosphate pyrophosphokinase
           chr05_pseudomolecule_IMGAG_V3 14243771-14248223 F
           EGN_Mt090430 20090702
          Length = 401

 Score =  377 bits (967), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 178/234 (76%), Positives = 202/234 (86%)

Query: 16  VHLFYCVECEDLARKVAAHSELITLRSINWRNFDDGFPNLYINDAHDIRGQHVAFLAAFS 75
           V LFY  E + LA  +A+ S+ I LRSI+W  F DGFPN++I +A  IRGQHVAFLA+FS
Sbjct: 91  VVLFYSAETKSLAYNIASESDAIELRSISWGKFPDGFPNIFIPNAQGIRGQHVAFLASFS 150

Query: 76  SPGVIFEQLSVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPIS 135
           SP VIFEQ+ VIYALP+LFVASFTLVLPFFPTG+ ERME+EGD+ATAFT+AR+LSNIPIS
Sbjct: 151 SPAVIFEQIPVIYALPKLFVASFTLVLPFFPTGTSERMEDEGDIATAFTLARLLSNIPIS 210

Query: 136 RGGPTSLVIYDIHALQERFYFGDHVLPLFETGIPLLKQRLHQLPDSDKIVVAFPDDGAWK 195
           RGGPTSLV +DIHALQERFYFGD++LP FE+GIPLLK+RL  LPDSD I +AFPDDGAWK
Sbjct: 211 RGGPTSLVTFDIHALQERFYFGDNILPCFESGIPLLKRRLQDLPDSDNISIAFPDDGAWK 270

Query: 196 RFHKLLDHFPMVVCTKVREGDKRIVRLKEGNPAGCHVVIVDDLVQSGGTLIECQ 249
           RFHK L HFP VVC KVREGDKRIVR+KEG P G H+VIVDDLVQSGGTLIECQ
Sbjct: 271 RFHKQLQHFPTVVCAKVREGDKRIVRIKEGEPKGRHIVIVDDLVQSGGTLIECQ 324


>IMGA|Medtr5g034640.2 Ribose-phosphate pyrophosphokinase
           chr05_pseudomolecule_IMGAG_V3 14243743-14248223 F
           EGN_Mt090430 20090702
          Length = 369

 Score =  309 bits (791), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 154/234 (65%), Positives = 174/234 (74%), Gaps = 32/234 (13%)

Query: 16  VHLFYCVECEDLARKVAAHSELITLRSINWRNFDDGFPNLYINDAHDIRGQHVAFLAAFS 75
           V LFY  E + LA  +A+ S+ I LRSI+W  F DGFPN++I +A  IRGQHVAFLA+FS
Sbjct: 91  VVLFYSAETKSLAYNIASESDAIELRSISWGKFPDGFPNIFIPNAQGIRGQHVAFLASFS 150

Query: 76  SPGVIFEQLSVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPIS 135
           SP VIFEQ+ VIYALP+LFVASFTLVLPFFPTG+ ERME+EGD+ATAFT+AR+LSNIPIS
Sbjct: 151 SPAVIFEQIPVIYALPKLFVASFTLVLPFFPTGTSERMEDEGDIATAFTLARLLSNIPIS 210

Query: 136 RGGPTSLVIYDIHALQERFYFGDHVLPLFETGIPLLKQRLHQLPDSDKIVVAFPDDGAWK 195
           RGGPTSLV +DIHALQ                                I +AFPDDGAWK
Sbjct: 211 RGGPTSLVTFDIHALQ--------------------------------ISIAFPDDGAWK 238

Query: 196 RFHKLLDHFPMVVCTKVREGDKRIVRLKEGNPAGCHVVIVDDLVQSGGTLIECQ 249
           RFHK L HFP VVC KVREGDKRIVR+KEG P G H+VIVDDLVQSGGTLIECQ
Sbjct: 239 RFHKQLQHFPTVVCAKVREGDKRIVRIKEGEPKGRHIVIVDDLVQSGGTLIECQ 292


>IMGA|Medtr8g103080.1 Phosphoribosyltransferase
           chr08_pseudomolecule_IMGAG_V3 22890648-22894795 E
           EGN_Mt090430 20090702
          Length = 396

 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 32/250 (12%)

Query: 16  VHLFYCVECEDLARKVAAHSELITLRSINWRNFDDGFPNLYINDAHDIRGQHVAFLAAFS 75
           + LF       L++++A +  L  L  I  + F DG   +Y+     +RG +V  +    
Sbjct: 79  LKLFSGTANPALSQEIARYMGL-ELGKITTKRFADG--EIYVQLQESVRGCNVYLIQPTC 135

Query: 76  SPGV--IFEQLSVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTM------AR 127
            P    + E   +I A  R    + T V+P+F    + R + +  +    T       A+
Sbjct: 136 PPANENLMELQVMIDACRRASAKNITAVIPYF---GYARADRKASICKNCTQGRESIAAK 192

Query: 128 ILSNIPISRGGPTSLVIYDIHALQERFYFG---DHV--LPLFETGIPLLKQRLHQLPDSD 182
           +++N+ I++ G   ++  D+H+ Q   YF    DHV   P+      +L     +   S+
Sbjct: 193 LVANL-ITKAGADRVLACDLHSGQSMGYFDIPVDHVHCQPV------ILDYLASKTISSN 245

Query: 183 KIVVAFPDDGAWKR---FHKLLDHFPMVVCTKVREGDK--RIVRLKEGNPAGCHVVIVDD 237
            +VV  PD G   R   F K L   P+ +  K R G     ++ L  G+  G   V+VDD
Sbjct: 246 DLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRSGHNVAEVMNLI-GDVKGKVAVMVDD 304

Query: 238 LVQSGGTLIE 247
           ++ + GT+ +
Sbjct: 305 MIDTAGTIAK 314