Jatropha Genome Database

JcCB0032921.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0032921.10 - phase: 0 /pseudo/partial
         (296 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g089890.1 Peptidase M20 chr01_pseudomolecule_IMGAG_V3...   292   1e-79

>IMGA|Medtr1g089890.1 Peptidase M20 chr01_pseudomolecule_IMGAG_V3
           18046686-18042200 F EGN_Mt090430 20090702
          Length = 469

 Score =  292 bits (748), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 136/164 (82%), Positives = 154/164 (93%)

Query: 132 AVEKHVLESGSIDTVGTVGILDLHPGAINSIPSKSHLEIDTRDIDEERRNGVIEKIKQSA 191
           AVEKHVLESGS+DTVGTVGIL LHPGAINSIPSKSH+EIDTRDIDEERRN VIEKI ++A
Sbjct: 305 AVEKHVLESGSVDTVGTVGILQLHPGAINSIPSKSHIEIDTRDIDEERRNQVIEKIHETA 364

Query: 192 ITIAKNRGVKLSEFNIINQDPPALSDKSVIEAMEAASKELNLTHKLMISRAYHDSLFMAR 251
           I I K RGVKL+EF+IINQDPPALSD++V+ AME A+KELNLT KLMISRAYHDSLFMAR
Sbjct: 365 IRITKTRGVKLTEFHIINQDPPALSDEAVVNAMETATKELNLTSKLMISRAYHDSLFMAR 424

Query: 252 ISPMGMLFIPCYRGYSHKPEEYASIEDIANGVKVLALTLSKLSL 295
           +SPMGM+FIPCY+GYSHKPEE+ASI+D++NGVKVLA TL+KLSL
Sbjct: 425 VSPMGMIFIPCYKGYSHKPEEFASIKDMSNGVKVLAFTLAKLSL 468