Jatropha Genome Database

JcCB0027191.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0027191.20 - phase: 0 /short
         (43 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g069010.1 Peptidase M24, methionine aminopeptidase ch...    87   2e-18
IMGA|Medtr5g017630.1 Peptidase M24, methionine aminopeptidase ch...    62   9e-11

>IMGA|Medtr5g069010.1 Peptidase M24, methionine aminopeptidase
           chr05_pseudomolecule_IMGAG_V3 24877521-24866199 E
           EGN_Mt090430 20090702
          Length = 364

 Score = 87.0 bits (214), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/41 (90%), Positives = 40/41 (97%)

Query: 1   MGSTECLTWPDNWTTLTADGSPAAQFEHTILITRTGAEILT 41
           MGST+C+TWPDNWTT+T DGSPAAQFEHTILITRTGAEILT
Sbjct: 314 MGSTDCITWPDNWTTVTTDGSPAAQFEHTILITRTGAEILT 354


>IMGA|Medtr5g017630.1 Peptidase M24, methionine aminopeptidase
           chr05_pseudomolecule_IMGAG_V3 6322952-6330563 E
           EGN_Mt090430 20090702
          Length = 351

 Score = 61.6 bits (148), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/42 (64%), Positives = 32/42 (76%)

Query: 1   MGSTECLTWPDNWTTLTADGSPAAQFEHTILITRTGAEILTK 42
           MGS   + W DNWT +T DGS +AQFEHTILIT  GAEI+T+
Sbjct: 309 MGSINPVMWKDNWTVVTEDGSLSAQFEHTILITPDGAEIMTQ 350