Jatropha Genome Database

JcCB0027041.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0027041.20 - phase: 0 
         (605 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr6g012910.1 Glycosyl transferase, group 1 chr06_pseudom...   343   1e-94
IMGA|Medtr3g123800.1 Glycosyl transferase, group 1; N-6 Adenine-...   342   5e-94

>IMGA|Medtr6g012910.1 Glycosyl transferase, group 1
           chr06_pseudomolecule_IMGAG_V3 2547326-2554167 E
           EGN_Mt090430 20090702
          Length = 758

 Score =  343 bits (881), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 202/506 (39%), Positives = 275/506 (54%), Gaps = 26/506 (5%)

Query: 79  MNLIFVGAEVGPWSKTXXXXXXXXXXPPAMAARGHRVMTVSPRYDQYRDAWDTSVLVQIK 138
           MN+I V AE  PWSKT          P A+A RGHRVM V+P Y  Y +A D  V  + K
Sbjct: 267 MNIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEAQDIGVRKRYK 326

Query: 139 VGDKIETVRFFHCYKRGVDRVFVDHPIFLEKVWGKTGSKIYGPRAGIDYKDNQMRFSLLC 198
           V  +   V +F  Y  GVD VF+D PIF         S IYG     +  D   R +L C
Sbjct: 327 VAGQDMEVTYFQTYIDGVDFVFIDSPIFQH-----LESNIYGG----NRVDILRRMALFC 377

Query: 199 LAALEAPRILNLNSNKYFSGPYGEDVIFIANDWHAAILPCYLKSIYKPMGIYQSAKVAFC 258
            AA+E P  +      Y  G    +++FIANDWH A+LP YLK+ Y+  G+    +    
Sbjct: 378 KAAVEVPWHVPCGGVCYGDG----NLVFIANDWHTALLPVYLKAYYRDHGLMNYTRSVLV 433

Query: 259 IHNIAYQGRFAFSDFSLLNLPDQYKGSFDFIDGYNKPVKGRKINWMKAGILESDRVLTVS 318
           IHNIA+QGR    DF++++LP  Y   F   D    PV G   N   AG+  +DR++TVS
Sbjct: 434 IHNIAHQGRGPLDDFNIVDLPGNYIDLFRMYD----PVGGEHFNIFAAGLKTADRIVTVS 489

Query: 319 PYYAQELVSGEDRGVELDNIIRKTG--ITGIVNGMDVQEWNPATDKYID----INYDATT 372
             YA EL + E  G  L+ II +      GIVNG+D ++WNP  D ++      NY   T
Sbjct: 490 HGYAWELKTSEG-GWGLNGIINENDWKFRGIVNGVDTKDWNPQFDVHLKSEGYTNYTLET 548

Query: 373 VMDAKPLLKEALQAEVGLPVDRNIPLIGFIGRLEEQKGSDILVAAISQLVQHNVQIVILG 432
           +   K   K ALQ E+GLPV  ++P+I FIGRL++QKG D++  AI  ++ H+VQ+++LG
Sbjct: 549 LQTGKRQCKAALQKELGLPVREDVPIIAFIGRLDQQKGVDLIGEAIPWMMSHDVQLIMLG 608

Query: 433 TGKKGFEKQIRQLEVLYPDKARGVAKFNVPLAHMIIAGSDFMLIPSRFEPCGLIQLHAMR 492
           TG+   E+ +RQ E  + DK RG   F+V +AH I AG+D +L+PSRFEPCGL QL+AM 
Sbjct: 609 TGRPDLEEMLRQFEWQHHDKIRGWVGFSVKMAHRITAGADILLMPSRFEPCGLNQLYAMN 668

Query: 493 YGTVPIVASTGGLVDTVKEGYTGFQMGAFHVECDXXXXXXXXXXXXXXXXXXXXYGTVAL 552
           YGTVP+V + GGL DTV+  +  F         D                    Y   + 
Sbjct: 669 YGTVPVVHAVGGLRDTVQP-FNPFDESGVGWTFDRAEANKLKAALWNCILTYRDYKK-SW 726

Query: 553 REMILNCMAQDLSWKGPARLWEKMLL 578
             +    M+QDLSW   A  +E++L+
Sbjct: 727 EGIQRRGMSQDLSWDNAAEQYEEVLV 752


>IMGA|Medtr3g123800.1 Glycosyl transferase, group 1; N-6
           Adenine-specific DNA methylase
           chr03_pseudomolecule_IMGAG_V3 31238660-31231370 E
           EGN_Mt090430 20090702
          Length = 663

 Score =  342 bits (876), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 191/448 (42%), Positives = 266/448 (59%), Gaps = 35/448 (7%)

Query: 80  NLIFVGAEVGPWSKTXXXXXXXXXXPPAMAARGHRVMTVSPRY-------DQYRDAWDTS 132
           N++FV +E  P+SKT          P A+A RGHRVM +SPRY        ++  A D  
Sbjct: 150 NIVFVTSEAAPYSKTGGLADVCGSLPIALAGRGHRVMVISPRYIHGTAADSKFSGAVDLG 209

Query: 133 VLVQIKVGDKIETVRFFHCYKRGVDRVFVDHPIFLEKVWGKTGSKIYGPRAGIDYKDNQM 192
             + +      + V FFH Y+ GVD VFVDHP F            YG + G  +KDNQ 
Sbjct: 210 SPINVFCFGGAQEVGFFHEYREGVDWVFVDHPSFHRP------GNPYGDKHGT-FKDNQF 262

Query: 193 RFSLLCLAALEAPRILNLNSNKYFSGPYGEDVIFIANDWHAAILPCYLKSIYKPMGIYQS 252
           RF+LL  AA EAP +L L    Y     GE  +F+ NDWHA+++   L S Y+P G+Y+ 
Sbjct: 263 RFTLLSHAACEAPLVLPLGGFTY-----GEKCLFLVNDWHASLVSVLLASKYRPYGVYKD 317

Query: 253 AKVAFCIHNIAYQGRFAFSDFSLLNLPDQYKGSFDFIDGYNKPV--------KGRKINWM 304
           A+    IHNIA+QG      +S L LP ++ G+     G+  P          G  +N++
Sbjct: 318 ARSILVIHNIAHQGVEPAITYSNLGLPQEWYGAL----GWVFPTWARTHALDTGEAVNFL 373

Query: 305 KAGILESDRVLTVSPYYAQELVSGEDRGVELDNIIR--KTGITGIVNGMDVQEWNPATDK 362
           K  I+ +DR++TVS  Y+ E+ + E  G  L  I+R  K+ ++GI NG+DV EW+P++D+
Sbjct: 374 KGAIVTADRIVTVSKGYSWEITTTEG-GFGLQEILRDRKSILSGITNGIDVTEWDPSSDE 432

Query: 363 YIDINYDATTVMDAKPLLKEALQAEVGLPVDRNIPLIGFIGRLEEQKGSDILVAAISQLV 422
           +I  +Y A   +  K   K ALQ E+GLPV  + P+IGF+GRL+ QKG D++  AI +L+
Sbjct: 433 HIASSYSADD-LSGKVKCKIALQKELGLPVRPDCPVIGFVGRLDYQKGIDLIRQAIPELM 491

Query: 423 QHNVQIVILGTGKKGFEKQIRQLEVLYPDKARGVAKFNVPLAHMIIAGSDFMLIPSRFEP 482
           Q +VQ V+LG+G   +E  +R  E LY DK RG   FNVP++H I AG D +L+PS FEP
Sbjct: 492 QDDVQFVMLGSGNPIYEDWMRATESLYKDKFRGWVGFNVPVSHRITAGCDILLMPSTFEP 551

Query: 483 CGLIQLHAMRYGTVPIVASTGGLVDTVK 510
           CGL QL+AMRYGT+P+V  TGGL DTV+
Sbjct: 552 CGLNQLYAMRYGTIPVVHETGGLRDTVQ 579