Jatropha Genome Database

JcCB0026001.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0026001.10 + phase: 0 
         (372 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g143240.1 Dehydrogenase, E1 component chr03_pseudomol...   604   e-173
IMGA|Medtr8g089660.1 Dehydrogenase, E1 component chr08_pseudomol...   370   e-103
IMGA|Medtr8g074090.1 Dehydrogenase, E1 component chr08_pseudomol...   150   7e-37
IMGA|Medtr5g037700.1 Dehydrogenase, E1 component chr05_pseudomol...   144   5e-35

>IMGA|Medtr3g143240.1 Dehydrogenase, E1 component
           chr03_pseudomolecule_IMGAG_V3 36897730-36900888 E
           EGN_Mt090430 20090702
          Length = 444

 Score =  604 bits (1558), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 275/380 (72%), Positives = 322/380 (84%), Gaps = 8/380 (2%)

Query: 1   MRFISQSNEKRVPCYRLLDDDGELTENNDFDE--------MYREMVTLQMMDTIFYEAQR 52
           M F+S+S + RVPCYR+LDD+GE     DF +        MY  MV LQ MDTIFYEAQR
Sbjct: 65  MTFLSESQQHRVPCYRVLDDNGEPIFGTDFVQVSEDFAVKMYNNMVALQTMDTIFYEAQR 124

Query: 53  QGRISFYVTSNGEEAINIASAAALGPDDVVLPQYREPGVLLWRGFTLEEFTNQCFGNKAD 112
           QGRISFYVT+NGEEAINIASAAAL  +DV+ PQYRE GVLLWRGFTL+EF NQCF NK D
Sbjct: 125 QGRISFYVTTNGEEAINIASAAALSMNDVIFPQYREQGVLLWRGFTLQEFANQCFSNKFD 184

Query: 113 YGKGRQMPIHYGSKKHNYFTVSSPIATQLPQAVGVAYSLKMDKKDACAVAYIGDGGTSEG 172
            GKGRQMP HYGS KHNY  V+S +ATQ+P AVG AYSLKMDKKDACAV Y GDGG+SEG
Sbjct: 185 NGKGRQMPAHYGSNKHNYMNVASTVATQIPHAVGAAYSLKMDKKDACAVTYFGDGGSSEG 244

Query: 173 DFHAALNFAAVMEAPVIFICRNNGWAISTHISEQFRSDGIVVKGQAYGIQSIRVDGNDAL 232
           DFHA LNFAAVMEAPVIFICRNNGWAIST  S+QFRSDGIVVKGQAYG++SIRVDGNDAL
Sbjct: 245 DFHAGLNFAAVMEAPVIFICRNNGWAISTPTSDQFRSDGIVVKGQAYGVRSIRVDGNDAL 304

Query: 233 AVYKTICAAREIAINEQRPILVEALTYRVGHHSTSDDSTKYRPVNEIEYWKMERNPVNRF 292
           A+Y  + AAR++A++E+RPIL+EALTYRVGHHSTSDDSTKYRP NEIE+W++ R+PV RF
Sbjct: 305 AIYSAVQAARQMAVSEERPILIEALTYRVGHHSTSDDSTKYRPANEIEWWRLSRDPVARF 364

Query: 293 RKWVERNGWWSDADESEVRSSIRKQLLKAIQVAEKTEKPPLGDLFDDVYDLPPSDLREQE 352
           RKW+ERNGWW+D  ESE+R+S+R+QLL+ IQVAE  EKPPL D+F DVYD+PPS+L EQE
Sbjct: 365 RKWIERNGWWNDMAESELRNSLRQQLLQTIQVAESVEKPPLADMFSDVYDVPPSNLHEQE 424

Query: 353 KQLRETINRHPHDYPSDVPL 372
           K+L+ET+ +HPH YP+++ +
Sbjct: 425 KRLKETVKKHPHVYPTNISI 444


>IMGA|Medtr8g089660.1 Dehydrogenase, E1 component
           chr08_pseudomolecule_IMGAG_V3 19321372-19323603 E
           EGN_Mt090430 20090702
          Length = 314

 Score =  370 bits (951), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 198/337 (58%), Positives = 226/337 (67%), Gaps = 45/337 (13%)

Query: 51  QRQGRISFYVTSNGEEAINIASAAALGPDDVVLPQ---YREPGVLLWRGFTLEEFTNQCF 107
           QRQGRISFY+TS GEEA+NIASAAAL  DD+       YREPGVLLWRGFTL++F +QCF
Sbjct: 8   QRQGRISFYLTSMGEEAVNIASAAALSSDDISCFSDCCYREPGVLLWRGFTLQQFAHQCF 67

Query: 108 GNKADYGKGRQMPIHYGSKKHNYFTVSSPIAT---QLPQAVGVAYSLKMDKKDACAVAYI 164
            N  D+GKGRQMPIHYGS  HNYFTVSSPIA       + +  AYSLKMD K A AV + 
Sbjct: 68  VNTNDFGKGRQMPIHYGSNNHNYFTVSSPIANSEHNFLKLLVPAYSLKMDGKSAFAVTFC 127

Query: 165 GDGGTSEGDFHAALNFAAVMEAPVIFICRNNGWAISTHISEQFRSDGIVVKGQAYGIQSI 224
           GDG      FHA +NFAAVMEAPVIFICRNNGWAIST + EQ RSDGIVVKGQAYGI SI
Sbjct: 128 GDG-----HFHAGMNFAAVMEAPVIFICRNNGWAISTPVEEQLRSDGIVVKGQAYGIWSI 182

Query: 225 RVDGNDALAVYKTICAAREIAINEQRPILVEALTYRVGHHSTSDDSTKYRPVNEIEYWKM 284
           RVDGNDALAVY  +  AREIAI EQRP+L+EAL+YRVGHHSTSDDSTKYR ++EI  WK 
Sbjct: 183 RVDGNDALAVYSAVHTAREIAIKEQRPVLIEALSYRVGHHSTSDDSTKYRAIDEIGKWK- 241

Query: 285 ERNPVNRFRKWVERNGWWSDADESEVRSSIRKQLLKAIQVAEKTEKPPLGDLFDD----- 339
                                   E+     K  LK ++  ++ +K  L           
Sbjct: 242 ------------------------EILRIDSKNGLKGMRKHKRNKKENLETSLRSIPNLK 277

Query: 340 ----VYDLPPSDLREQEKQLRETINRHPHDYPSDVPL 372
               VYD   S+L EQE++LR  I +HP DYPSDVPL
Sbjct: 278 WTCLVYDRLSSNLEEQERELRNIIEKHPKDYPSDVPL 314


>IMGA|Medtr8g074090.1 Dehydrogenase, E1 component
           chr08_pseudomolecule_IMGAG_V3 14677469-14685386 F
           EGN_Mt090430 20090702
          Length = 395

 Score =  150 bits (380), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 160/321 (49%), Gaps = 10/321 (3%)

Query: 25  TENNDFDEMYREMVTLQMM----DTIFYEAQRQGRISFYVTSNGEEAINIASAAALGPDD 80
           T  ++    + +MV ++ M    D+++     +G    Y   +G+EA+ +   AA+   D
Sbjct: 60  TTASELMSFFNDMVLMRRMEIAADSLYKAKLIRGFCHLY---DGQEAVAVGMEAAINRKD 116

Query: 81  VVLPQYREPGVLLWRGFTLEEFTNQCFGNKADYGKGRQMPIHYGSKKHNYFTVSSPIATQ 140
            V+  YR+    L RG TL E  ++  G K    KG+   +H+  K+  ++     +  Q
Sbjct: 117 CVITAYRDHCTFLCRGGTLVEVFSELMGRKDGCSKGKGGSMHFYRKEGGFYGGHGIVGAQ 176

Query: 141 LPQAVGVAYSLKMDKKDACAVAYIGDGGTSEGDFHAALNFAAVMEAPVIFICRNNGWAIS 200
           +P  VG+A+  K +K         GDG  ++G    ALN AA+ + P I +C NN + + 
Sbjct: 177 IPLGVGLAFGQKYNKDPNVTFTLYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMG 236

Query: 201 THISEQFRSDGIVVKGQAYGIQSIRVDGNDALAVYKTICAAREIAINEQRPILVEALTYR 260
           T      +S     +G       ++VDG D LAV +    A+E A+ +  P+++E  TYR
Sbjct: 237 TAEWRSAKSPAYYKRGDY--APGLKVDGMDVLAVKQACKFAKEHAL-KNGPLILEMDTYR 293

Query: 261 VGHHSTSDDSTKYRPVNEIEYWKMERNPVNRFRKWVERNGWWSDADESEVRSSIRKQLLK 320
              HS SD  + YR  +EI   + ER+P+ R RK V  +   ++ +  ++    RKQ+ +
Sbjct: 294 YHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLVLAHDISTEKELKDIEKEARKQVDE 353

Query: 321 AIQVAEKTEKPPLGDLFDDVY 341
           AI  A++++ P   DLF +VY
Sbjct: 354 AIAKAKESQMPDPSDLFTNVY 374


>IMGA|Medtr5g037700.1 Dehydrogenase, E1 component
           chr05_pseudomolecule_IMGAG_V3 15869362-15862955 F
           EGN_Mt090430 20090702
          Length = 395

 Score =  144 bits (364), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 156/318 (49%), Gaps = 10/318 (3%)

Query: 28  NDFDEMYREMVTLQMM----DTIFYEAQRQGRISFYVTSNGEEAINIASAAALGPDDVVL 83
           N+    +  M  ++ M    D+++     +G    Y   +G+EA+ +   A+    D ++
Sbjct: 63  NELLNFFHTMSLMRRMEIAADSLYKSKLIRGFCHLY---DGQEAVAVGMEASTTKKDCII 119

Query: 84  PQYREPGVLLWRGFTLEEFTNQCFGNKADYGKGRQMPIHYGSKKHNYFTVSSPIATQLPQ 143
             YR+    L RG TL E  ++  G      KG+   +H+  K   +F     +  Q+P 
Sbjct: 120 TAYRDHCTFLGRGGTLLEVYSELMGRVDGCSKGKGGSMHFYKKDSGFFGGHGIVGAQVPL 179

Query: 144 AVGVAYSLKMDKKDACAVAYIGDGGTSEGDFHAALNFAAVMEAPVIFICRNNGWAISTHI 203
             G+A+  K  K ++   A  GDG  ++G    ALN AA+ + P I +C NN + + T  
Sbjct: 180 GCGLAFGQKYLKNESVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAE 239

Query: 204 SEQFRSDGIVVKGQAYGIQSIRVDGNDALAVYKTICAAREIAINEQRPILVEALTYRVGH 263
               +S     +G    +  ++VDG D LAV + +  A+E A+ +  PI++E  TYR   
Sbjct: 240 WRAAKSPAYYKRGDY--VPGLKVDGMDVLAVKQAVKFAKEHAL-QNGPIILEMDTYRYHG 296

Query: 264 HSTSDDSTKYRPVNEIEYWKMERNPVNRFRKWVERNGWWSDADESEVRSSIRKQLLKAIQ 323
           HS SD  + YR  +EI   + ER+P+ R +K +  +   ++ +  +    +RK++ +AI 
Sbjct: 297 HSMSDPGSTYRTRDEISGVRQERDPIERVKKLLLSHDIATEKELKDTEKEVRKEVDEAIA 356

Query: 324 VAEKTEKPPLGDLFDDVY 341
            A+++  P   DLF +VY
Sbjct: 357 KAKESPVPKPSDLFTNVY 374