Jatropha Genome Database

JcCB0023791.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0023791.20 - phase: 0 
         (181 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g077590.1 Transcription factor, MADS-box; Transcripti...   231   1e-61
IMGA|Medtr5g049070.1 Transcription factor, MADS-box; Transcripti...   194   2e-50
IMGA|Medtr7g014850.1 Transcription factor, MADS-box; Transcripti...   128   2e-30
IMGA|Medtr7g083430.1 Transcription factor, K-box chr07_pseudomol...    79   1e-15
IMGA|Medtr4g147260.1 Transcription factor, MADS-box; Transcripti...    74   4e-14
IMGA|Medtr7g014840.1 Transcription factor, MADS-box; Transcripti...    71   3e-13
IMGA|Medtr3g104190.1 Transcription factor, MADS-box; Transcripti...    70   6e-13
IMGA|Medtr5g049080.1 Transcription factor, K-box chr05_pseudomol...    65   2e-11
IMGA|Medtr7g083450.1 Transcription factor, K-box chr07_pseudomol...    59   1e-09
IMGA|Medtr5g032500.2 Transcription factor, K-box chr05_pseudomol...    58   2e-09
IMGA|Medtr5g032500.1 Transcription factor, K-box chr05_pseudomol...    58   3e-09
IMGA|Medtr5g075960.1 Transcription factor, K-box chr05_pseudomol...    57   6e-09
IMGA|Medtr2g010020.1 Transcription factor, K-box chr02_pseudomol...    54   3e-08
IMGA|Medtr1g046070.1 Transcription factor, MADS-box; Transcripti...    53   7e-08
IMGA|Medtr3g013050.1 Transcription factor, MADS-box; Transcripti...    52   2e-07
IMGA|Medtr4g136380.1 Transcription factor, MADS-box; Transcripti...    48   2e-06
IMGA|Medtr1g129880.1 Transcription factor, MADS-box; Transcripti...    47   6e-06

>IMGA|Medtr8g077590.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr08_pseudomolecule_IMGAG_V3
           15487044-15481223 E EGN_Mt090430 20090702
          Length = 240

 Score =  231 bits (590), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 128/180 (71%), Positives = 152/180 (84%), Gaps = 3/180 (1%)

Query: 1   MEKILERYERYSYAERQLIANDLNSQENWTLEYNRLKAKVELLERNHRHYLGEDLDSLSL 60
           MEKILERYERYSYAERQL+AND  SQ NWT+EY RLKAK++LL+RN+RHY+GEDL S+SL
Sbjct: 63  MEKILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLGSMSL 122

Query: 61  KELQNLEQQLDTALKHIRARNNQLMHESISEYQKKEKAIEAQNSMLAKQIKEKEKAVA-Q 119
           KELQ+LEQQLDTALK IR R NQ+M+ESISE QKKEK I+ QN+MLAK+IKEKEK  A Q
Sbjct: 123 KELQSLEQQLDTALKLIRTRRNQVMYESISELQKKEKVIQEQNNMLAKKIKEKEKIAAQQ 182

Query: 120 QALWEQQNRNTHMSPFLVPQQPLPCLNIGGTYQEEAVPEVRRNQLDLTLEPIYSCHLGCF 179
           QA WE  N +  ++P  + QQ LP LN+GG Y+EEA PE+ RN+LDLTLEP+Y+CHLGCF
Sbjct: 183 QAQWEHPNHHG-VNPNYLLQQQLPTLNMGGNYREEA-PEMGRNELDLTLEPLYTCHLGCF 240


>IMGA|Medtr5g049070.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr05_pseudomolecule_IMGAG_V3
           20888794-20881921 E EGN_Mt090430 20090702
          Length = 301

 Score =  194 bits (493), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 100/157 (63%), Positives = 124/157 (78%), Gaps = 3/157 (1%)

Query: 1   MEKILERYERYSYAERQLIANDLNSQENWTLEYNRLKAKVELLERNHRHYLGEDLDSLSL 60
           ME+ILER+ERY YAER L+ ND ++QENWT+EY RLKAKVELL+RNHRHY+GE+LDS+SL
Sbjct: 63  MEQILERHERYGYAERLLVGNDTDTQENWTMEYTRLKAKVELLQRNHRHYMGEELDSMSL 122

Query: 61  KELQNLEQQLDTALKHIRARNNQLMHESISEYQKKEKAIEAQNSMLAKQIKEKEKAVAQQ 120
           KELQ LEQQLDT LK+IR R  Q+M+E+ISE QKKEK I+ QN+ML+K+IKEKEK VAQ+
Sbjct: 123 KELQCLEQQLDTGLKNIRTRKTQVMYEAISELQKKEKGIQEQNNMLSKEIKEKEKVVAQE 182

Query: 121 AL--WEQQNRNTHMSPFLVPQQPLPCLNIGGTYQEEA 155
           A   WEQ N     + FL+    LP LN+G  ++  A
Sbjct: 183 AAAQWEQPNYRVD-TCFLLQDPLLPGLNMGNPWKFPA 218


>IMGA|Medtr7g014850.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr07_pseudomolecule_IMGAG_V3
           3615380-3622271 E EGN_Mt090430 20090702
          Length = 256

 Score =  128 bits (321), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/163 (47%), Positives = 107/163 (65%), Gaps = 14/163 (8%)

Query: 1   MEKILERYERYSYAERQLIANDLNSQENWTLEYNRLKAKVELLERNHRHYLGEDLDSLSL 60
           ME ILERYER ++ E     N+  +Q NW+ EY +L AKV++LERN R+++G DLD LS+
Sbjct: 63  MEDILERYERQNHTELTGATNE--TQGNWSFEYMKLTAKVQVLERNLRNFVGNDLDPLSV 120

Query: 61  KELQNLEQQLDTALKHIRARNNQLMHESISEYQKKEKAIEAQNSMLAKQIKEKEKAVAQ- 119
           KELQ+LEQQLDT+LK IR R NQ+M++SISE  K+ + ++ QN+ LAK  KEKEK V++ 
Sbjct: 121 KELQSLEQQLDTSLKRIRTRKNQVMNQSISELHKRARTLQEQNNKLAK-TKEKEKTVSEH 179

Query: 120 -QALWE-------QQNRNTHMSPFLV--PQQPLPCLNIGGTYQ 152
            Q   E           N    P ++  PQ+ +P LN+ GT Q
Sbjct: 180 PQRCLETIGIGQCSSTLNLICQPEVLPPPQRLVPSLNLSGTLQ 222


>IMGA|Medtr7g083430.1 Transcription factor, K-box
           chr07_pseudomolecule_IMGAG_V3 17802338-17805458 H
           EGN_Mt090430 20090702
          Length = 211

 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/104 (44%), Positives = 66/104 (63%), Gaps = 1/104 (0%)

Query: 3   KILERYERYSYAERQLIANDLNSQENWTLEYNRLKAKVELLERNHRHYLGEDLDSLSLKE 62
           K LERY+R S+  +    N+  +Q NW  E ++LKAK E L+++ R  LGEDL  L++KE
Sbjct: 8   KTLERYQRCSFTSQNDNVNEHETQ-NWYQEMSKLKAKYESLQKSQRQLLGEDLGPLNMKE 66

Query: 63  LQNLEQQLDTALKHIRARNNQLMHESISEYQKKEKAIEAQNSML 106
           LQNLE+QL+ AL   R R  Q+M E + E ++KE+ +   N  L
Sbjct: 67  LQNLEKQLEGALAQARQRKTQIMVEQMEELKRKERHLGDINKQL 110


>IMGA|Medtr4g147260.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr04_pseudomolecule_IMGAG_V3
           36883844-36877638 E EGN_Mt090430 20090702
          Length = 241

 Score = 73.9 bits (180), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 74/115 (64%), Gaps = 9/115 (7%)

Query: 1   MEKILERYERYSYA--ERQLIAND---LNSQENWTLEYNRLKAKVELLERNHRHYLGEDL 55
           M K LERY++ +Y   E  + A +   L+SQ+    EY +LKA+ E L+R+ R+ +GEDL
Sbjct: 63  MLKTLERYQKCNYGAPETNVSAREALELSSQQ----EYLKLKARYEALQRSQRNLMGEDL 118

Query: 56  DSLSLKELQNLEQQLDTALKHIRARNNQLMHESISEYQKKEKAIEAQNSMLAKQI 110
             LS KEL++LE+QLD++LK IR+   Q M + +S+ Q+KE  +   N  L +++
Sbjct: 119 GPLSSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHMLSEANRSLRQRL 173


>IMGA|Medtr7g014840.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr07_pseudomolecule_IMGAG_V3
           3593718-3599199 E EGN_Mt090430 20090702
          Length = 245

 Score = 70.9 bits (172), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 81/156 (51%), Gaps = 9/156 (5%)

Query: 1   MEKILERYERYSYAERQLIANDLNSQENWTLEYNRLKAKVELLERNHRHYLGEDLDSLSL 60
           M K L+RY++ SY   + ++      E+   EY +LK + E L+R  R+ LGEDL  LS 
Sbjct: 63  MLKTLDRYQKCSYGAVE-VSKPAKELESSYREYLKLKQRFENLQRAQRNLLGEDLGPLSS 121

Query: 61  KELQNLEQQLDTALKHIRARNNQLMHESISEYQKKEKAIEAQNSMLAKQIKEKEKAVAQQ 120
           K+L+ LE+QLD++LK +R+   Q M + +++ Q KE  +   N  L+ +++E       +
Sbjct: 122 KDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSIKLEEINSRNHYR 181

Query: 121 ALWEQQN--------RNTHMSPFLVPQQPLPCLNIG 148
             WE  +        +N H   F    +  P L IG
Sbjct: 182 QSWEASDQSMQYEAQQNAHSQSFFQQLECNPTLQIG 217


>IMGA|Medtr3g104190.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr03_pseudomolecule_IMGAG_V3
           25812647-25808917 E EGN_Mt090430 20090702
          Length = 246

 Score = 70.1 bits (170), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 71/117 (60%), Gaps = 11/117 (9%)

Query: 1   MEKILERYERYSYA-------ERQLIANDLNSQENWTLEYNRLKAKVELLERNHRHYLGE 53
           M K LERY++ +Y         ++ +  +L+SQ+    EY +LKA+ E L+R  R+ +GE
Sbjct: 63  MLKTLERYQKCNYGAPEANAHSKEALVLELSSQQ----EYLKLKARYESLQRTQRNLMGE 118

Query: 54  DLDSLSLKELQNLEQQLDTALKHIRARNNQLMHESISEYQKKEKAIEAQNSMLAKQI 110
           DL  LS K+L+ LE+QLD++LK IR+   Q M + + + Q+KE  +   N  L +++
Sbjct: 119 DLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQRM 175


>IMGA|Medtr5g049080.1 Transcription factor, K-box
           chr05_pseudomolecule_IMGAG_V3 20901480-20897129 H
           EGN_Mt090430 20090702
          Length = 128

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 66/102 (64%), Gaps = 2/102 (1%)

Query: 32  EYNRLKAKVELLERNHRHYLGEDLDSLSLKELQNLEQQLDTALKHIRARNNQLMHESISE 91
           EY +LK+KVE L++  R+ LGE+L+ L + EL+ +E+Q+D++LK IR+   Q M + +++
Sbjct: 7   EYIKLKSKVEALQQTQRNILGEELEQLDINELEQIERQVDSSLKTIRSNKTQHMLDQLTD 66

Query: 92  YQKKEKAIEAQNSMLAKQIKEKEKAVAQQALWEQQNRNTHMS 133
            QKKE+ +   N++L  ++  +E  V  Q  WE + +N   S
Sbjct: 67  LQKKEEMLLETNNILRNKL--EEINVTLQPTWESREQNATYS 106


>IMGA|Medtr7g083450.1 Transcription factor, K-box
           chr07_pseudomolecule_IMGAG_V3 17811872-17810220 F
           EGN_Mt090430 20090702
          Length = 115

 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 47/70 (67%)

Query: 39  KVELLERNHRHYLGEDLDSLSLKELQNLEQQLDTALKHIRARNNQLMHESISEYQKKEKA 98
           K+ELLE + R  +GE L S SL ELQ +EQQL+ ++  +RAR NQ     I + ++KEK 
Sbjct: 3   KIELLEASKRKLMGEGLGSCSLDELQQIEQQLEKSVSVVRARKNQAYKHQIDQLKEKEKN 62

Query: 99  IEAQNSMLAK 108
           + A+N+ L+K
Sbjct: 63  LVAENARLSK 72


>IMGA|Medtr5g032500.2 Transcription factor, K-box
           chr05_pseudomolecule_IMGAG_V3 13163679-13160585 E
           EGN_Mt090430 20090702
          Length = 169

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 63/110 (57%), Gaps = 2/110 (1%)

Query: 1   MEKILERYERYSYAERQLIANDLNSQENWTLEYNRLKAKVELLERNHRHYLGEDLDSLSL 60
           M+ ++ERY      E Q + N  +  + W  E + L+ +++ L+ NHR  +GE L  LS+
Sbjct: 6   MKSVIERYN--ICKEDQQVTNPESEVKFWQREADILRQQLQSLQENHRQLMGEQLYGLSI 63

Query: 61  KELQNLEQQLDTALKHIRARNNQLMHESISEYQKKEKAIEAQNSMLAKQI 110
           + LQ+LE QL+ +L+ +R +  +++ + I E  +K   I  +N  L K++
Sbjct: 64  RNLQDLESQLELSLQGVRMKKEKILTDEIQELNRKGSIIHQENVELYKKV 113


>IMGA|Medtr5g032500.1 Transcription factor, K-box
           chr05_pseudomolecule_IMGAG_V3 13163679-13160585 E
           EGN_Mt090430 20090702
          Length = 183

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 63/110 (57%), Gaps = 2/110 (1%)

Query: 1   MEKILERYERYSYAERQLIANDLNSQENWTLEYNRLKAKVELLERNHRHYLGEDLDSLSL 60
           M+ ++ERY      E Q + N  +  + W  E + L+ +++ L+ NHR  +GE L  LS+
Sbjct: 6   MKSVIERYN--ICKEDQQVTNPESEVKFWQREADILRQQLQSLQENHRQLMGEQLYGLSI 63

Query: 61  KELQNLEQQLDTALKHIRARNNQLMHESISEYQKKEKAIEAQNSMLAKQI 110
           + LQ+LE QL+ +L+ +R +  +++ + I E  +K   I  +N  L K++
Sbjct: 64  RNLQDLESQLELSLQGVRMKKEKILTDEIQELNRKGSIIHQENVELYKKV 113


>IMGA|Medtr5g075960.1 Transcription factor, K-box
           chr05_pseudomolecule_IMGAG_V3 27711235-27721420 E
           EGN_Mt090430 20090702
          Length = 169

 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 1/110 (0%)

Query: 1   MEKILERYERYSYAERQLIANDLNSQENWTLEYNRLKAKVELLERNHRHYLGEDLDSLSL 60
           M  +++RY +      QL  +  +  + W  E   L+ ++  L+ +HR  +GE+L  L++
Sbjct: 6   MRSVIDRYNKTKEEHNQL-GSSTSEIKFWQREAAMLRQQLHNLQESHRQIMGEELSGLTV 64

Query: 61  KELQNLEQQLDTALKHIRARNNQLMHESISEYQKKEKAIEAQNSMLAKQI 110
           KELQ LE QL+ +L+ +R +  QL  + I E  +K   I  +N  L +++
Sbjct: 65  KELQGLENQLEISLRGVRMKKEQLFMDEIQELNRKGDIIHQENVELYRKV 114


>IMGA|Medtr2g010020.1 Transcription factor, K-box
           chr02_pseudomolecule_IMGAG_V3 2311955-2312917 H
           EGN_Mt090430 20090702
          Length = 121

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 48/82 (58%)

Query: 29  WTLEYNRLKAKVELLERNHRHYLGEDLDSLSLKELQNLEQQLDTALKHIRARNNQLMHES 88
           W  E   L+ +++ L+ +HR  +GE L  L +KELQNLE QL+ +LK +R + + ++   
Sbjct: 22  WQTEAATLRQQLQYLQESHRQLMGEGLSGLGIKELQNLENQLEISLKGVRMKKDHILTNE 81

Query: 89  ISEYQKKEKAIEAQNSMLAKQI 110
           I E  +K   +  +N  L K++
Sbjct: 82  IKELHQKGNLVHQENVELHKKM 103


>IMGA|Medtr1g046070.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr01_pseudomolecule_IMGAG_V3
           10653449-10650286 E EGN_Mt090430 20090702
          Length = 232

 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MEKILERYERYSYAERQLIANDLNSQENWTLEY----NRLKAKVELLERNHRHYLGEDLD 56
           M++I+ERYER S  +R +  +D +      LE       L+ +   LE   + YLG+D+ 
Sbjct: 64  MDQIIERYER-STGKRIMAEHDDHQIHPRELEMFHDMAMLRQESLRLELGIQRYLGDDMK 122

Query: 57  SLSLKELQNLEQQLDTALKHIRARNNQLMHESISEYQKKEKAIEAQNSMLA----KQIKE 112
            L   +L  +E +L+ +L  +R R N+LM + +   Q+KE+ ++ +N  L+    K + E
Sbjct: 123 DLQFDDLSKIEHELEISLAKVRNRQNELMQQQMENLQRKERILQDENMNLSNWEHKAVME 182

Query: 113 KEKAVAQQALWEQQ 126
            +  + Q A +E Q
Sbjct: 183 NKAVMDQFAFFEDQ 196


>IMGA|Medtr3g013050.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr03_pseudomolecule_IMGAG_V3
           2348300-2341992 E EGN_Mt090430 20090702
          Length = 223

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 56/84 (66%)

Query: 32  EYNRLKAKVELLERNHRHYLGEDLDSLSLKELQNLEQQLDTALKHIRARNNQLMHESISE 91
           E  +L+ ++++L+ ++RH +G+ L +L++KEL+ LE +L+  +  IR++ ++++   I  
Sbjct: 93  ESAKLRQQIQMLQNSNRHLMGDALSTLTVKELKQLENRLERGITRIRSKKHEMLLAEIEY 152

Query: 92  YQKKEKAIEAQNSMLAKQIKEKEK 115
           +QK+E  +E +N  L  +I + E+
Sbjct: 153 FQKREIELENENLCLRTKINDVER 176


>IMGA|Medtr4g136380.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr04_pseudomolecule_IMGAG_V3
           33294099-33299967 E EGN_Mt090430 20090702
          Length = 251

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 51/84 (60%)

Query: 32  EYNRLKAKVELLERNHRHYLGEDLDSLSLKELQNLEQQLDTALKHIRARNNQLMHESISE 91
           E  +L+ ++  L+ ++R  +GE L +++ K+L+NLE +L+  +  IR++ N+++   +  
Sbjct: 116 EAAKLRVQISNLQNHNRQMMGESLSNMNGKDLRNLESKLEKGISRIRSKKNEMLFAELEY 175

Query: 92  YQKKEKAIEAQNSMLAKQIKEKEK 115
            QK+E  +   N +L  +I E E+
Sbjct: 176 MQKREVELHNSNQVLRAKISESEQ 199


>IMGA|Medtr1g129880.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr01_pseudomolecule_IMGAG_V3
           29094866-29091202 E EGN_Mt090430 20090702
          Length = 239

 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 46/75 (61%)

Query: 36  LKAKVELLERNHRHYLGEDLDSLSLKELQNLEQQLDTALKHIRARNNQLMHESISEYQKK 95
           L+ K E L R  R++LGE++++LS+K+LQ+LE+QL+  L   R    Q + E + E +++
Sbjct: 98  LRVKHESLARTQRNFLGEEINALSIKDLQSLEKQLERTLAQARKHQMQKLMERVDELREE 157

Query: 96  EKAIEAQNSMLAKQI 110
              +E  N  L  +I
Sbjct: 158 VHKVEEVNKELESKI 172