Jatropha Genome Database

JcCB0022951.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0022951.10 + phase: 0 /pseudo
         (370 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g008560.1 Aminotransferase, class I and II; ; chr02_p...   208   4e-54
IMGA|Medtr4g122020.1 Aminotransferase, class I and II; ; chr04_p...   205   2e-53

>IMGA|Medtr2g008560.1 Aminotransferase, class I and II; ;
           chr02_pseudomolecule_IMGAG_V3 1650708-1654241 E
           EGN_Mt090430 20090702
          Length = 440

 Score =  208 bits (529), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 99/142 (69%), Positives = 108/142 (76%)

Query: 228 VPKRLLYSNGFPVIKDFNRIVCTCFNGASNIVQAGGLACLSNEGYKAVNSVVNYYKENAK 287
           VP+ LLYSNGFPV+ DFNRIVCTCFNGASNI QAGGLACLS EG  AV S+V+YY ENA+
Sbjct: 298 VPEELLYSNGFPVLHDFNRIVCTCFNGASNISQAGGLACLSPEGLNAVQSLVDYYMENAR 357

Query: 288 ILVEAFQSLGLKVYGGKNAPYIWVHFPGMNSWDVFNEILEKTDIVTVPXXXXXXXXXXYI 347
           ILV A  SLGL VYGGKNAPY+WV FPG  SWDVF EILE T I+T+P          YI
Sbjct: 358 ILVTALTSLGLTVYGGKNAPYVWVRFPGSKSWDVFAEILENTHIITIPGSGFGPGGEGYI 417

Query: 348 RISAFGHRKSILEASARLTKLF 369
           RISAFG R SI+EAS RL  L 
Sbjct: 418 RISAFGQRDSIIEASERLKYLL 439



 Score =  199 bits (506), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 91/147 (61%), Positives = 113/147 (76%)

Query: 1   MESLKSGYLFPEISIREFEHMQKRPHARLIRLGIGDTTQPIPEIITSAMAEHAYALSTLQ 60
           ME L+ GYLFPEI   E  H++K PHA +I LGIGDTT+P+P I+TS+M +  + LST +
Sbjct: 44  MEKLQHGYLFPEIERHELLHLKKYPHANVIDLGIGDTTKPLPAIVTSSMVDFVHGLSTAE 103

Query: 61  GYKGYGAEQGNMDLRMAIAERFYKDMGIKGQEIFVSDGAQADISRLQMLLGSNVTVAVQD 120
           GYKGYG EQG   LR AIA + YKD+GIK  E+FVSDGAQ DISRLQ+L+G N+ +AVQD
Sbjct: 104 GYKGYGPEQGEKALRKAIAHKVYKDLGIKPSEVFVSDGAQCDISRLQLLMGPNLKIAVQD 163

Query: 121 PSFPGYIDSSVIIGQAGKYEEETGNFQ 147
           PSFP YIDSSVIIG AGK+ +  G ++
Sbjct: 164 PSFPAYIDSSVIIGHAGKFVDRIGKYE 190


>IMGA|Medtr4g122020.1 Aminotransferase, class I and II; ;
           chr04_pseudomolecule_IMGAG_V3 28801431-28796116 E
           EGN_Mt090430 20090702
          Length = 459

 Score =  205 bits (522), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 92/142 (64%), Positives = 113/142 (79%)

Query: 228 VPKRLLYSNGFPVIKDFNRIVCTCFNGASNIVQAGGLACLSNEGYKAVNSVVNYYKENAK 287
           +PK+LL+S+GFPV KDFNRIVCTCFNGASNI QAGGLACLS EG KA+  V+ +YKEN  
Sbjct: 317 IPKQLLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGLKAMRGVIGFYKENTN 376

Query: 288 ILVEAFQSLGLKVYGGKNAPYIWVHFPGMNSWDVFNEILEKTDIVTVPXXXXXXXXXXYI 347
           I+V+ F SLG KVYGGK+APY+WVHFPG NSWDVF+EILEKT +VT P          ++
Sbjct: 377 IIVDTFDSLGFKVYGGKSAPYVWVHFPGQNSWDVFSEILEKTHVVTTPGSGFGPGGEGFV 436

Query: 348 RISAFGHRKSILEASARLTKLF 369
           R+SAFGHR+++LEA  R  +L+
Sbjct: 437 RVSAFGHRENVLEACRRFKQLY 458



 Score =  194 bits (494), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 89/143 (62%), Positives = 115/143 (80%)

Query: 4   LKSGYLFPEISIREFEHMQKRPHARLIRLGIGDTTQPIPEIITSAMAEHAYALSTLQGYK 63
           L++GYLFPEI+ R   H+ K P A++I LGIGDTT+PIPE+ITSA+A+ ++ALSTL+GY 
Sbjct: 66  LQAGYLFPEIARRRSAHLLKYPDAKIISLGIGDTTEPIPEVITSALAKKSHALSTLEGYS 125

Query: 64  GYGAEQGNMDLRMAIAERFYKDMGIKGQEIFVSDGAQADISRLQMLLGSNVTVAVQDPSF 123
           GYGAEQG   LR AIA  FY D+GI+  +IFVSDGA+ DISRLQ++ GSNV +AVQDPS+
Sbjct: 126 GYGAEQGEKPLRSAIASTFYPDLGIEDDDIFVSDGAKCDISRLQIVFGSNVKMAVQDPSY 185

Query: 124 PGYIDSSVIIGQAGKYEEETGNF 146
           P Y+DSSVI+GQ G Y+++   F
Sbjct: 186 PAYVDSSVIMGQTGLYQKDVQKF 208