Jatropha Genome Database

JcCB0022491.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0022491.10 - phase: 0 /pseudo
         (311 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g124500.1 Major intrinsic protein chr01_pseudomolecul...    79   2e-15
IMGA|Medtr4g022460.1 Sugar transporter superfamily; Aquaporin ch...    60   1e-09
IMGA|Medtr4g022340.1 Sugar transporter superfamily; Aquaporin ch...    60   2e-09
IMGA|Medtr7g009920.1 Major intrinsic protein chr07_pseudomolecul...    51   6e-07

>IMGA|Medtr1g124500.1 Major intrinsic protein
           chr01_pseudomolecule_IMGAG_V3 27144155-27145984 E
           EGN_Mt090430 20090702
          Length = 194

 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/58 (62%), Positives = 42/58 (72%)

Query: 254 MNPVRTLGPAVAAGNYKAIWIYLVAPIXXXXXXXXXXXXVKLREDEADPPRQVRSFRR 311
           MNPVRTLGPAVAAGNYK +WIYLVAP             +KLR++ A+PP+ VRSFRR
Sbjct: 137 MNPVRTLGPAVAAGNYKHLWIYLVAPTLGALAGSGVYTLIKLRDNGAEPPQPVRSFRR 194


>IMGA|Medtr4g022460.1 Sugar transporter superfamily; Aquaporin
           chr04_pseudomolecule_IMGAG_V3 4584933-4581267 E
           EGN_Mt090430 20090702
          Length = 244

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 37/62 (59%), Gaps = 4/62 (6%)

Query: 254 MNPVRTLGPAVAAGNYKAIWIYLVAPIXXXXXXXXXXXXVKLREDEADPPRQVR----SF 309
           MNPVRTLGPA+AA NYK IW+YL+API            VKL ++E +   +      SF
Sbjct: 183 MNPVRTLGPAIAANNYKGIWLYLIAPILGALGGAGAYTVVKLPDEEFNSEVKASSAPGSF 242

Query: 310 RR 311
           RR
Sbjct: 243 RR 244


>IMGA|Medtr4g022340.1 Sugar transporter superfamily; Aquaporin
           chr04_pseudomolecule_IMGAG_V3 4521828-4525883 F
           EGN_Mt090430 20090702
          Length = 305

 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 37/62 (59%), Gaps = 4/62 (6%)

Query: 254 MNPVRTLGPAVAAGNYKAIWIYLVAPIXXXXXXXXXXXXVKLREDEADPPRQVR----SF 309
           MNPVRTLGPA+AA NYK IW+YL+API            VKL ++E +   +      SF
Sbjct: 244 MNPVRTLGPAIAANNYKGIWLYLIAPILGALGGAGAYTAVKLPDEEFNSEVKASSAPGSF 303

Query: 310 RR 311
           RR
Sbjct: 304 RR 305


>IMGA|Medtr7g009920.1 Major intrinsic protein
           chr07_pseudomolecule_IMGAG_V3 1993841-1989668 E
           EGN_Mt090430 20090702
          Length = 274

 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 1/46 (2%)

Query: 236 VGRNCSWSNCCAKHSCCG-MNPVRTLGPAVAAGNYKAIWIYLVAPI 280
           VG + + ++  A     G MNP RTLGPA+A  +YK IWIY+V PI
Sbjct: 187 VGSSVTIASIVAGPISGGSMNPARTLGPAIATSSYKGIWIYMVGPI 232