Jatropha Genome Database

JcCB0019891.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0019891.10 + phase: 1 /partial
         (584 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g033580.1 Region of unknown function DUF1726 chr02_ps...   742   0.0  
IMGA|Medtr4g141070.1 UPF0202 protein At1g10490, putative chr04_p...   471   e-133
IMGA|Medtr4g141080.1 UPF0202 protein At3g57940, putative chr04_p...   358   5e-99

>IMGA|Medtr2g033580.1 Region of unknown function DUF1726
           chr02_pseudomolecule_IMGAG_V3 9196148-9186916 H
           EGN_Mt090430 20090702
          Length = 1006

 Score =  742 bits (1915), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/576 (64%), Positives = 436/576 (75%), Gaps = 23/576 (3%)

Query: 3   FKKIELSESIRYASGDPIESWLNALLCLDVTNXXXXXXXXXXXXECNLYYVNRDTLFSYH 62
           FKKIELSESIRYASGDP+ESWLN LLCLDV+N            EC+LYYVNRDTLFSYH
Sbjct: 442 FKKIELSESIRYASGDPVESWLNTLLCLDVSNAIPNLSRLPPCSECDLYYVNRDTLFSYH 501

Query: 63  KDSELFLQRMMALYVASHYKNSPNDLQLLADAPAHHLFVLLGPVDESKNQLPDILCVIQV 122
           KDSELFLQ+MM+LYVASHYKNSPNDLQL++DAPAHHLFVLLGPVDESKNQLPDILCVIQV
Sbjct: 502 KDSELFLQQMMSLYVASHYKNSPNDLQLMSDAPAHHLFVLLGPVDESKNQLPDILCVIQV 561

Query: 123 CLEGQISRQSAIKSLSDGHQPFGDQIPWKFCEQFRDTGFPSLSGARIVRIATHPSAMRLG 182
           C EG+IS QSAI+SLS G QPFGDQIPWKFCEQF+DT FPSLSGARIVRIATHPSAMRLG
Sbjct: 562 CFEGKISCQSAIQSLSSGRQPFGDQIPWKFCEQFQDTNFPSLSGARIVRIATHPSAMRLG 621

Query: 183 YGSTAVELLTRYYEGQFTPISEVDFENNVETPQVRIMEAAEKVSLLEENIKPRTDLPHLL 242
           YGS AVELL RYYEGQ TPISE+D E  ++ P  R+ EAAEK SLLEEN+KPRTDLPHLL
Sbjct: 622 YGSQAVELLIRYYEGQLTPISEMDIEPEIQAPP-RVTEAAEKASLLEENVKPRTDLPHLL 680

Query: 243 VTLRERRPEKLHYLGVSFGLTLDLFRFWGKHKFAPFYIGQIPSTVTGEHTCMVLKPLNND 302
           V LRERRPEKLHY+GVSFGL LDLF FW K KF+PFYIGQIP+TVTGEH+CMVLKPLNND
Sbjct: 681 VNLRERRPEKLHYIGVSFGLMLDLFSFWRKLKFSPFYIGQIPNTVTGEHSCMVLKPLNND 740

Query: 303 DFEVSGSDEWGFFGPFYQAFRLRFSRLLESCFRAMEYKLAMSVLAPKINYADTDTKATSS 362
           + EV GS+   FF PF+  FR RF+RLL S FR M+YKLAM ++ PKI +  T+ + T S
Sbjct: 741 EIEVDGSNHQDFFRPFHLDFRQRFTRLLSSTFRGMDYKLAMRIMDPKIKF--TEQEQTKS 798

Query: 363 TPEGFWKSLSFEITADDMQRLKAYTDNLADYRLILDSVSVLARLYFRGKLPVTLSYVQAS 422
           T + F    S  +   DM+RLKAY D   ++R+ILD V +L  LYF+ KLPV LS +QAS
Sbjct: 799 TSDKF----SGPVGEYDMKRLKAYVDGPYEFRVILDLVPILTHLYFQEKLPVELSALQAS 854

Query: 423 ILLCIGLQKQDFTYIEGQLKLERTQILSLFMKAMRRFHKYLYGIASDEIQSTLPQLKERV 482
           +LLCIGLQ QD +YIE QL+L+  QIL    K M++F+KYL G+ S +I+ST P+LK+ V
Sbjct: 855 VLLCIGLQNQDISYIEVQLELKEEQILQQLKKIMKKFYKYLDGLESKKIESTFPRLKDIV 914

Query: 483 LEPLKISVEDDLNEAAKQVEDEMKTKTEA-LNPELLQQYAIVDRDGDFENAXXXXXXXXX 541
           +EPL +S+++DLN AAKQVED+MK+K EA L P             DFE+          
Sbjct: 915 MEPLSVSLDEDLNNAAKQVEDDMKSKEEAPLAP-------------DFESILQNNGGKMP 961

Query: 542 XXXXXXXXXXXTKVEKHGKQESHKKG--KRRKGDHS 575
                      + V+   ++ SHK G  KR K +HS
Sbjct: 962 FDGVIAVKAIRSGVKLQKEKRSHKSGGTKRGKDNHS 997


>IMGA|Medtr4g141070.1 UPF0202 protein At1g10490, putative
           chr04_pseudomolecule_IMGAG_V3 34741485-34736986 E
           EGN_Mt090430 20090702
          Length = 397

 Score =  471 bits (1211), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 231/392 (58%), Positives = 296/392 (75%), Gaps = 5/392 (1%)

Query: 194 YYEGQFTPISEVDFENNVETPQVRIMEAAEKVSLLEENIKPRTDLPHLLVTLRERRPEKL 253
           YYEGQ T ISE D ++ V TPQ+ + EAAEKVSLLEEN+KPRTDLPHLLV LRERRPEKL
Sbjct: 6   YYEGQLTSISENDVDDKVHTPQITVTEAAEKVSLLEENVKPRTDLPHLLVHLRERRPEKL 65

Query: 254 HYLGVSFGLTLDLFRFWGKHKFAPFYIGQIPSTVTGEHTCMVLKPLNNDDFEVSGSDEWG 313
           HYLGVSFGLT+DLFRFW KHKFAPFYIGQIP+ VTGEH+CMVLKPLNND+ EV  S+++G
Sbjct: 66  HYLGVSFGLTVDLFRFWKKHKFAPFYIGQIPNNVTGEHSCMVLKPLNNDEIEVDESNQFG 125

Query: 314 FFGPFYQAFRLRFSRLLESCFRAMEYKLAMSVLAPKINYADTDTKATSSTPEGFWKSLSF 373
           FFGPFYQ FR RF++LL S FR MEYKLAMS++ PKIN+  T+ +   +T + F  S+  
Sbjct: 126 FFGPFYQDFRQRFAKLLASTFRGMEYKLAMSIIDPKINF--TEQEPIKTTADKFLGSVKE 183

Query: 374 EITADDMQRLKAYTDNLADYRLILDSVSVLARLYFRGKLPVTLSYVQASILLCIGLQKQD 433
            ++  DM+RL+AY DNLAD+ LILD V  L+ LYF+ K+PVTLS+ QA +LLC GLQ Q+
Sbjct: 184 NLSPHDMKRLEAYVDNLADFHLILDLVPALSHLYFQEKIPVTLSHAQACVLLCTGLQNQN 243

Query: 434 FTYIEGQLKLERTQILSLFMKAMRRFHKYLYGIASDEIQSTLPQLKERVLEPLKISVEDD 493
            ++IEGQ+ LER QILSLF+K M++F+KYL+G+A  EI+ST+P+LK+ V+EPL +SV++D
Sbjct: 244 ISHIEGQMGLERQQILSLFIKVMKKFYKYLHGLAFKEIESTMPRLKDIVMEPLSVSVDED 303

Query: 494 LNEAAKQVEDEMKTKTEAL-NPELLQQYAIVDRDGDFENAXXXXXXXXXXXXXXXXXXXX 552
           LN+ AKQ ED+MK K+++L  PELLQ+YA  D +  F+NA                    
Sbjct: 304 LNDGAKQFEDDMKAKSDSLFTPELLQRYAFEDGESSFDNALQNTGGKIPTGGLVSVKSNR 363

Query: 553 TKVEKHGKQESHKKGKRRKGD-HSPKSNKKSK 583
            K++   +  SHK  K+R+ D HS KS+KK +
Sbjct: 364 -KLKSENENGSHKSDKKRRMDNHSHKSSKKER 394


>IMGA|Medtr4g141080.1 UPF0202 protein At3g57940, putative
           chr04_pseudomolecule_IMGAG_V3 34749022-34742509 E
           EGN_Mt090430 20090702
          Length = 657

 Score =  358 bits (918), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 169/191 (88%), Positives = 173/191 (90%)

Query: 3   FKKIELSESIRYASGDPIESWLNALLCLDVTNXXXXXXXXXXXXECNLYYVNRDTLFSYH 62
           FKKIELSESIRYA GDPIESWLN LLCLDV+N            EC+LYYVNRDTLFSYH
Sbjct: 447 FKKIELSESIRYAPGDPIESWLNTLLCLDVSNAIPNISRLPPASECDLYYVNRDTLFSYH 506

Query: 63  KDSELFLQRMMALYVASHYKNSPNDLQLLADAPAHHLFVLLGPVDESKNQLPDILCVIQV 122
           KDSELFLQRMMALYVASHYKNSPNDLQL+ADAPAHHLFVLLGPVDESKNQLPDILCVIQV
Sbjct: 507 KDSELFLQRMMALYVASHYKNSPNDLQLMADAPAHHLFVLLGPVDESKNQLPDILCVIQV 566

Query: 123 CLEGQISRQSAIKSLSDGHQPFGDQIPWKFCEQFRDTGFPSLSGARIVRIATHPSAMRLG 182
           CLEGQISRQSAI+SLS GHQP GDQIPWKFCEQFRDT FPSLSGARIVRIATHPSAMRLG
Sbjct: 567 CLEGQISRQSAIQSLSHGHQPCGDQIPWKFCEQFRDTVFPSLSGARIVRIATHPSAMRLG 626

Query: 183 YGSTAVELLTR 193
           YGS AVELLTR
Sbjct: 627 YGSQAVELLTR 637