Jatropha Genome Database
- JcCB0019451.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0019451.20 - phase: 2 /TE/partial
(1105 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr4g041210.1 RNA-directed DNA polymerase (Reverse transc... 896 0.0
IMGA|Medtr3g162430.1 RNA-directed DNA polymerase (Reverse transc... 783 0.0
IMGA|AC234026_1.1 RNA-directed DNA polymerase (Reverse transcrip... 659 0.0
IMGA|AC229695_21.1 RNA-directed DNA polymerase (Reverse transcri... 571 e-163
IMGA|AC233082_1.1 Polynucleotidyl transferase, Ribonuclease H fo... 433 e-121
IMGA|Medtr6g028320.1 Polynucleotidyl transferase, Ribonuclease H... 397 e-110
IMGA|Medtr3g026370.1 RNA-directed DNA polymerase (Reverse transc... 370 e-102
IMGA|Medtr4g073750.1 Polynucleotidyl transferase, Ribonuclease H... 338 1e-92
IMGA|Medtr3g026360.1 Polynucleotidyl transferase, Ribonuclease H... 289 6e-78
IMGA|Medtr3g061900.1 Polynucleotidyl transferase, Ribonuclease H... 244 2e-64
IMGA|AC229695_24.1 Chromo AC229695.5 111963-111064 H EGN_Mt09043... 188 2e-47
IMGA|Medtr6g077060.1 RNA-directed DNA polymerase (Reverse transc... 188 2e-47
IMGA|AC233082_3.1 RNA-directed DNA polymerase (Reverse transcrip... 175 1e-43
IMGA|Medtr2g021830.1 RNA-directed DNA polymerase (Reverse transc... 149 6e-36
IMGA|Medtr3g061740.1 RNA-directed DNA polymerase (Reverse transc... 148 1e-35
IMGA|Medtr5g047510.1 Putative gag-pol polyprotein, identical, ch... 129 5e-30
IMGA|AC137826_3.1 Polynucleotidyl transferase, Ribonuclease H fo... 126 5e-29
IMGA|AC233082_2.1 RNA-directed DNA polymerase (Reverse transcrip... 126 7e-29
IMGA|Medtr8g078520.1 RNA-directed DNA polymerase ; Chromo; Zinc ... 112 8e-25
IMGA|Medtr4g073740.1 polyprotein, putative chr04_pseudomolecule_... 111 2e-24
IMGA|Medtr4g155670.1 hypothetical protein chr04_pseudomolecule_I... 98 2e-20
IMGA|Medtr3g102240.1 RNA-directed DNA polymerase ; Chromo; Zinc ... 97 4e-20
IMGA|Medtr5g062290.1 RNA-directed DNA polymerase (Reverse transc... 96 1e-19
IMGA|Medtr4g062370.1 RNA-directed DNA polymerase (Reverse transc... 92 1e-18
IMGA|Medtr3g021280.1 gypsy/Ty-3 retroelement polyprotein; 69905-... 89 1e-17
IMGA|Medtr6g065000.1 Polynucleotidyl transferase, Ribonuclease H... 81 2e-15
IMGA|Medtr3g169300.1 RNA-directed DNA polymerase (Reverse transc... 80 7e-15
IMGA|Medtr3g169290.1 Putative retroelement pol polyprotein, chr0... 77 6e-14
IMGA|Medtr7g022550.1 RNA-directed DNA polymerase (Reverse transc... 74 3e-13
IMGA|Medtr3g059220.1 RNA-directed DNA polymerase (Reverse transc... 74 5e-13
IMGA|Medtr3g059210.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V... 73 7e-13
IMGA|Medtr4g155680.1 RNA-directed DNA polymerase ; Chromo; Zinc ... 72 1e-12
IMGA|Medtr1g042380.1 Putative retroelement pol polyprotein, chr0... 69 1e-11
IMGA|Medtr4g073730.1 Cyclin-like F-box chr04_pseudomolecule_IMGA... 69 2e-11
IMGA|AC137826_27.1 hypothetical protein AC137826.21 98803-103811... 68 3e-11
IMGA|Medtr2g042450.1 Polynucleotidyl transferase, Ribonuclease H... 67 7e-11
IMGA|Medtr6g065010.1 reverse transcriptase, putative chr06_pseud... 61 4e-09
IMGA|Medtr6g077310.1 Polynucleotidyl transferase, Ribonuclease H... 59 1e-08
IMGA|AC135504_3.1 polyprotein, putative AC135504.61 16846-17064 ... 58 2e-08
IMGA|Medtr5g105390.1 Polynucleotidyl transferase, Ribonuclease H... 56 8e-08
IMGA|Medtr5g062240.1 Enzymatic polyprotein, related chr05_pseudo... 56 1e-07
IMGA|Medtr4g080260.1 hypothetical protein chr04_pseudomolecule_I... 55 1e-07
IMGA|AC135504_4.1 gag-pol polyprotein, related AC135504.61 17375... 54 3e-07
IMGA|Medtr5g084900.1 polyprotein, putative chr05_pseudomolecule_... 53 8e-07
IMGA|Medtr4g047410.1 gag-pol polyprotein, putative chr04_pseudom... 51 4e-06
IMGA|Medtr4g047200.1 gag-pol polyprotein, putative chr04_pseudom... 51 4e-06
>IMGA|Medtr4g041210.1 RNA-directed DNA polymerase (Reverse
transcriptase); Peptidase aspartic, active site;
Retrotransposon gag protein; Polynucleotidyl transferase,
Ribonuclease H fold chr04_pseudomolecule_IMGAG_V3
9673679-9667953 H EGN_Mt090430 20090702
Length = 1435
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/992 (47%), Positives = 627/992 (63%), Gaps = 23/992 (2%)
Query: 1 GVCSNLQLFLGSYTISGDFFIFPLRGVDIILGVAWLETLGDVQVNWQRLTMKFLHQNQLV 60
G+ SNLQ+ + ++ IS ++ PL G D++LG WL +LG +++ L +KF N +
Sbjct: 434 GLVSNLQVDIQNHAISLPVYLLPLTGADLVLGAPWLASLGPHIADYKALYIKFHLGNTFI 493
Query: 61 ELCGD----PSLTRGTILAKSFSKVRNVSFSTVLLELSIDPPPISCVSTVENSDSESQQL 116
L G+ PS + K + + ++ + L L PP + EN D L
Sbjct: 494 TLYGEQIQKPSQAHFHHI-KRLASTKAIAETFYLHLLDAQPPNLMSTVIPENLDPA---L 549
Query: 117 QELLAAHAFVFQEIYGLPPRRSTDHRIALQPGQGPISVKPYRYGHIQKDEIERLVHDMLS 176
+LL+ ++ VFQ GLPP R DH I L P+ VKPYRY H QK +IE++V +ML
Sbjct: 550 HDLLSKYSSVFQSPAGLPPCRQQDHAIPLLTDSNPVKVKPYRYAHSQKTQIEKMVLEMLQ 609
Query: 177 AGIIKXXXXXXXXXVLLVKKKDGSWRFCVDYRQLNRSTIPHKYLIPIIQELLDELHSSQV 236
GII+ VLLVKKKDGSWRFC DYR LN T+ + IP + ELLDEL +
Sbjct: 610 QGIIQPSSSPFSSPVLLVKKKDGSWRFCTDYRALNAITVKDSFPIPTVDELLDELFGAAY 669
Query: 237 FSKLDLKSGFYQIRVAETNTPKTAFWTHSGHYEFLVMPFGLTNAPATFQAVMNDLFRPYL 296
FSKLDL SG++QI V + KTAF TH G YE+LVMPFGL+NAPA+FQ +MN +F L
Sbjct: 670 FSKLDLLSGYHQILVKSEDRHKTAFRTHQGLYEWLVMPFGLSNAPASFQNLMNKVFCNLL 729
Query: 297 RKFVLVFFDDILVCSNSWDSXXXXXXXXXXXXCDNKLQLNQKKCFFGRKLVEYLGHIISK 356
R+ VLVFFDDILV S +W + + L KC FG ++YLGH +S
Sbjct: 730 RRSVLVFFDDILVYSPTWHAHLAHLEEVLQLLQTHSLFAKISKCCFGMTQIDYLGHTVSG 789
Query: 357 DGVAMDPSKVSSILQWPIPKSTKAVRGFLGITGYYRRFIANYGQLARPLTTLLKDAQAKF 416
GVAMD SKV ++L WP P + K +RGFLG+TGYYRRFI Y +A PLT LLK + F
Sbjct: 790 QGVAMDCSKVKAVLDWPTPTNLKQLRGFLGLTGYYRRFIQGYAAVASPLTDLLK--KDSF 847
Query: 417 AWPQDAQDAFIALKHAMTTSPVLAMPDFSKPFIVETDASKSGIGVVLHQDNRPLAYFSKA 476
W ++AQ AF LK ++T +PVL++PDFSK F++ETDAS GIG VL Q P+A+FSK
Sbjct: 848 KWTENAQLAFERLKQSLTKAPVLSLPDFSKSFVLETDASGFGIGAVLSQGKHPIAFFSKK 907
Query: 477 TGDPAMSRSAYENELMALVLAIRHWRPYLIGRCFTVRTDQKSLMHLLQQNVSTPAQQYWL 536
+SAY EL A+ AI +R YLIG F +RTDQKSL L Q + TP QQ WL
Sbjct: 908 LSPRMQKQSAYVRELYAISEAISKFRHYLIGHQFIIRTDQKSLKSLTDQAIQTPEQQNWL 967
Query: 537 AKLMGYNFNIEYKTEKTNRAADALSRCHDEVEFQAISGPQWIDWDAISKEIQ----QDST 592
K +GYNF IEYK K N AADALSR AIS PQ A++++IQ +DS
Sbjct: 968 HKFLGYNFTIEYKPGKDNIAADALSRS----LLLAISSPQ----PALTQQIQIAGKEDSL 1019
Query: 593 LSKIISEISSGKPSQAHYSLIHGNLFYKGRLVLPPSSKWIPKIIEEFHSTPLGGHSGAYR 652
+ +I+ + +YS+ +G L +K RLV+P + I I++EFHS+PLGGHSG R
Sbjct: 1020 YTSLITHCLQNTGPE-NYSIRNGLLHWKDRLVIPEVPELIHSILQEFHSSPLGGHSGITR 1078
Query: 653 SYKRVASNFYWPGMMGTIKKFVAACLICQTHKYEAKSPAGMFQPLPVPSQIWEDIALDFI 712
+ R+++ F+WP + + F++ CL+CQ K PAG+ QPL +PSQIWED+A+DF+
Sbjct: 1079 TKARISAQFFWPNLHKDVTLFISTCLVCQQAKVATTLPAGLLQPLSIPSQIWEDVAMDFV 1138
Query: 713 TGLPKSQRVDCILVVVDRLSKYAHFLGLRHPFTAASVATLFMREIVRLHGLPVTIVSDRD 772
TGLP S + VV+DRLSKY H L+ +++ SVA F+ +V+LHG P +IVSDRD
Sbjct: 1139 TGLPPSHGYTVLFVVIDRLSKYCHLTPLKSDYSSLSVAQAFLHSVVKLHGFPRSIVSDRD 1198
Query: 773 PLFLSNFWTELFRLQGTTPSFSTAYHPQSDGQTEVLNCSLESYLRCFSFEHPKSWAKWLC 832
+FLS FW LF+L GTT + S+AYHPQSDGQ+E LN +E YLRCF+ ++PKSW L
Sbjct: 1199 KVFLSKFWQHLFKLSGTTLNMSSAYHPQSDGQSEALNKCIELYLRCFTADNPKSWFTLLP 1258
Query: 833 WAEYWYNTNYQGAAKKTPFELVYGRPPPTLQRFLPGETRVEALSQHLQDRDKILQQLRYN 892
WAE+WYNT++ + TPF VYGR PP + ++ AL L +RD +L QL+ +
Sbjct: 1259 WAEFWYNTSHHSSIGMTPFRAVYGRDPPQVVKYEIQSADPPALQDLLSERDIVLTQLKAH 1318
Query: 893 LHRAQQLMTKYANPKRRDVQFSIGERVFHKLRPHRQQSVANRVNDKLAARFYGPFEVLKK 952
L +AQ +M KYA+ KRR ++F +G++V KL+P+RQ SVA R N KL R++GPFEVL +
Sbjct: 1319 LAKAQNIMKKYADQKRRLLEFEVGDQVLVKLQPYRQASVALRKNQKLGLRYFGPFEVLAR 1378
Query: 953 VGAVAYKLQLPLXSKIHPVFHVSQLKRVIGNH 984
VG+VAYKL LP +KIHPVFHVS LK G+H
Sbjct: 1379 VGSVAYKLALPPTAKIHPVFHVSLLKPCKGSH 1410
>IMGA|Medtr3g162430.1 RNA-directed DNA polymerase (Reverse
transcriptase); Retrotransposon gag protein;
Polynucleotidyl transferase, Ribonuclease H fold
chr03_pseudomolecule_IMGAG_V3 42425246-42419198 E
EGN_Mt090430 20090702
Length = 1584
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/874 (46%), Positives = 542/874 (62%), Gaps = 34/874 (3%)
Query: 115 QLQELLAAHAFVFQEIYGLPPRRSTDHRIALQPGQGPISVKPYRYGHIQKDEIERLVHDM 174
++Q LL ++ +F E +GLPP+R DH I L P P++VKPYRY H QK+ + ++HDM
Sbjct: 536 EIQHLLNSYPTIFIEPHGLPPKRPHDHHIPLLPNTPPVNVKPYRYPHSQKEAMTTIIHDM 595
Query: 175 LSAGIIKXXXXXXXXXVLLVKKKDGSWRFCVDYRQLNRSTIPHKYLIPIIQELLDELHSS 234
L GII VLLV+KKDGSWRFCVDYR LN TI ++ IP I EL DEL S+
Sbjct: 596 LHDGIIVPSTSPYSSPVLLVRKKDGSWRFCVDYRALNAVTICDRFPIPTIDELFDELGSA 655
Query: 235 QVFSKLDLKSGFYQIRVAETNTPKTAFWTHSGHYEFLVMPFGLTNAPATFQAVMNDLFRP 294
+FSK DL+SG++QIRV +T KT F T GHYEFLVMPFGL+NAP+TFQ+ MND RP
Sbjct: 656 SLFSKTDLRSGYHQIRVVPEDTHKTTFRTFDGHYEFLVMPFGLSNAPSTFQSAMNDFLRP 715
Query: 295 YLRKFVLVFFDDILVCSNSWDSXXXXXXXXXXXXCDNKLQLNQKKCFFGRKLVEYLGHII 354
YLR+ L DD L+ + KC F ++YLGHII
Sbjct: 716 YLRRRSL---DDHLI----------HLRLILDLLASHHFVAKMSKCVFAVDTIDYLGHII 762
Query: 355 SKDGVAMDPSKVSSILQWPIPKSTKAVRGFLGITGYYRRFIANYGQLARPLTTLLKDAQA 414
S GV D K+ +IL WP P+S +RGFLG+ +YRRF+ +Y LA PLT LL+
Sbjct: 763 SHKGVQPDEDKIQAILSWPTPRSLTTLRGFLGLISFYRRFVRHYATLAAPLTDLLRS--T 820
Query: 415 KFAWPQDAQDAFIALKHAMTTSPVLAMPDFSKPFIVETDASKSGIGVVLHQDNRPLAYFS 474
KF A+ AF LK +TT+PVL +P+FSK F+VETDAS IG VL Q+ PLA+FS
Sbjct: 821 KFTLNATAEAAFSKLKEQITTTPVLILPNFSKLFVVETDASAVAIGAVLSQEGPPLAFFS 880
Query: 475 KATGDPAMSRSAYENELMALVLAIRHWRPYLIGRCFTVRTDQKSLMHLLQQNVSTPAQQY 534
K + S S Y E+ A+ AI+ W YLIGR F + TDQKSL +LL Q + TP QQ
Sbjct: 881 KKMCNRMQSSSVYVREMYAITEAIKKWHQYLIGRHFHIYTDQKSLKNLLVQTIQTPEQQK 940
Query: 535 WLAKLMGYNFNIEYKTEKTNRAADALSR--CHDEVEFQAISGPQWIDWDAISKEIQQDST 592
W++KL G+NF YK K N+ ADALSR + A+S P + + D T
Sbjct: 941 WVSKLQGFNFEFFYKPGKANQVADALSRRTSEESTLILAVSSPIPVLLQQLRDFYTTDPT 1000
Query: 593 LSKIISEISSGKPSQAHYSLIHGNLFYKGRLVLPPSSKWIPKIIEEFHSTPLGGHSGAYR 652
+++ Q H + N ++ L ++ E+HSTP G+SG
Sbjct: 1001 GQQLL---------QQHKESQNENQNFRTPLR--------DVMLTEYHSTPSSGYSGVQP 1043
Query: 653 SYKRVASNFYWPGMMGTIKKFVAACLICQTHKYEAKSPAGMFQPLPVPSQIWEDIALDFI 712
+ R++++F WPG+ +K FV C +CQ +KY G+ PL +P ++ ED+++DF+
Sbjct: 1044 TLARISASFSWPGIYADVKSFVRTCQVCQQNKYITTKKQGLLHPLDIPEKVREDLSMDFV 1103
Query: 713 TGLPKSQRVDCILVVVDRLSKYAHFLGLRHPFTAASVATLFMREIVRLHGLPVTIVSDRD 772
T LP S I VV DRL+K+AHF+ L FTA +A+ F EI RLHG+P +IVSDRD
Sbjct: 1104 THLPNSFGHTTIWVVCDRLTKFAHFIALSAKFTAPDLASRFSVEIYRLHGIPKSIVSDRD 1163
Query: 773 PLFLSNFWTELFRLQGTTPSFSTAYHPQSDGQTEVLNCSLESYLRCFSFEHPKSWAKWLC 832
LF+S FW ELF++QGTT FSTAYHP++DGQTEV+N SLE+YLRCF+ EHPK W K+L
Sbjct: 1164 TLFVSAFWKELFKIQGTTLRFSTAYHPETDGQTEVVNRSLETYLRCFTSEHPKQWYKYLH 1223
Query: 833 WAEYWYNTNYQGAAKKTPFELVYGRPPPTLQRFLPGETRVEALSQHLQDRDKILQQLRYN 892
AE WYN+++ A + TPFE +YGRPPP + ++ G + + ++ Q L R I+ L++N
Sbjct: 1224 LAELWYNSSFHSAIRMTPFEALYGRPPPRMTDYISGRSSLLSVDQILTHRQAIITNLKHN 1283
Query: 893 LHRAQQLMTKYANPKRRDVQFSIGERVFHKLRPHRQQSVANRVNDKLAARFYGPFEVLKK 952
LH ++Q M AN R D F G+ V KL+P+RQ +V +RV+ KLA RF+GPF V ++
Sbjct: 1284 LHISKQRMAFQANKHRIDCAFQEGDLVLLKLQPYRQTTVQHRVSQKLAKRFFGPFTVHRR 1343
Query: 953 VGAVAYKLQLPLXSKIHPVFHVSQLKRVIGNHPV 986
+G++AY+L+LP SKIHPVFHVSQL+ G P
Sbjct: 1344 IGSMAYELRLPPDSKIHPVFHVSQLRAYHGRDPT 1377
>IMGA|AC234026_1.1 RNA-directed DNA polymerase (Reverse
transcriptase) AC234026.1 2154-4412 H EGN_Mt090430
20090702
Length = 705
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/732 (46%), Positives = 462/732 (63%), Gaps = 60/732 (8%)
Query: 1 GVCSNLQLFLGSYTISGDFFIFPLRGVDIILGVAWLETLGDVQVNWQRLTMKFLHQNQLV 60
G C +Q+ LGS +S D +F L G+D++LGV+WL TLG+V ++W+ LTM+F + Q+V
Sbjct: 31 GACKGIQMRLGSIEVSVDALVFELGGIDVVLGVSWLSTLGEVVMDWKLLTMQFWFEGQMV 90
Query: 61 ELCGDPSLTRGTILAKSFSKVRNVSFSTVLLELSIDPPPISCVSTVENSDSESQQL-QEL 119
+L G + K SF LE + + +++ + QE
Sbjct: 91 KLQGQGA------------KQEQQSFLNTFLEDKQHRGGLDWWCPLGGKAKKNKDVAQED 138
Query: 120 LAAHAFVFQEIYGLPPRRSTDHRIALQPGQGPISVKPYRYGHIQKDEIERLVHDMLSAGI 179
L++ F + +GPI+V+PY+Y H QK+EIE+ V ++L+AG+
Sbjct: 139 LSSIIEQFPK------------------AKGPINVRPYKYPHHQKEEIEKQVAELLAAGV 180
Query: 180 IKXXXXXXXXXVLLVKKKDGSWRFCVDYRQLNRSTIPHKYLIPIIQELLDELHSSQVFSK 239
I+ V+LVKKKD SWR CVDYR LN++ IP KY IP++ ELLDEL+ + +FSK
Sbjct: 181 IRPSMSAYSSPVILVKKKDKSWRMCVDYRALNKARIPDKYPIPVVDELLDELYGATIFSK 240
Query: 240 LDLKSGFYQIRVAETNTPKTAFWTHSGHYEFLVMPFGLTNAPATFQAVMNDLFRPYLRKF 299
+DLKSG++QIRV E + KTAF TH+GHYE+LVMPFGL NAPATFQ+ MND+FRP+LRKF
Sbjct: 241 IDLKSGYHQIRVHENDIHKTAFRTHNGHYEYLVMPFGLMNAPATFQSTMNDIFRPFLRKF 300
Query: 300 VLVFFDDILVCSNSWDSXXXXXXXXXXXXCDNKLQLNQKKCFFGRKLVEYLGHIISKDGV 359
VLVFFDDIL+ S N N KC FG V+YLGH+IS GV
Sbjct: 301 VLVFFDDILIYSKDLAEHQSHLNQVLTILFSNCFVANLSKCKFGCVEVDYLGHVISGKGV 360
Query: 360 AMDPSKVSSILQWPIPKSTKAVRGFLGITGYYRRFIANYGQLARPLTTLLKDAQAKFAWP 419
A+DP K+ IL+WP PK+ K VRGFLG+TGYYR+F+ +YG++A+PLT L K + F+W
Sbjct: 361 AVDPEKIRCILEWPEPKNVKGVRGFLGLTGYYRKFVKDYGKIAKPLTELTK--KDGFSWS 418
Query: 420 QDAQDAFIALKHAMTTSPVLAMPDFSKPFIVETDASKSGIGVVLHQDNRPLAYFSKATGD 479
A +AF LKH MT+ VL +P+FS PF +E DA+ GIG VL Q+ +P+AYFSKA
Sbjct: 419 PTAAEAFNRLKHIMTSPLVLVLPNFSLPFEIECDAAGRGIGAVLMQNKQPVAYFSKALSA 478
Query: 480 PAMSRSAYENELMALVLAIRHWRPYLIGRCFTVRTDQKSLMHLLQQNVSTPAQQYWLAKL 539
+S+S YE ELMALVL I+HWR YL+G+ FTV TD KSL H LQQ V++P QQ WLAKL
Sbjct: 479 GNLSKSVYEKELMALVLCIQHWRHYLLGKAFTVHTDHKSLKHFLQQRVTSPDQQCWLAKL 538
Query: 540 MGYNFNIEYKTEKTNRAADALSRCHDEVEFQA-ISGPQWIDWDAISKEIQQDSTLSKIIS 598
+GY F ++YK N+AADALSRCH +V+ ++ IS P W+ + +E+ +D + KI+
Sbjct: 539 LGYQFEVKYKPGLENKAADALSRCHGDVDLKSLISYPTWLGGKQLLEEVAKDPDIQKIMI 598
Query: 599 EISSGKPSQAHYSLIHGNLFYKGRLVLPPSSKWIPKIIEEFHSTPLGGHSGAYRSYKRVA 658
E+ + + +A Y + G LFY+GRLV+ P+S IP ++EEFHSTP GGHSG R+Y+R+A
Sbjct: 599 EVQNQQEIKAGYEVKQGVLFYQGRLVISPTSPSIPLLLEEFHSTPSGGHSGFLRTYRRLA 658
Query: 659 SNFYWPGMMGTIKKFVAACLICQTHKYEAKSPAGMFQPLPVPSQIWEDIALDFITGLPKS 718
N YW GM ++ FV AC + ++LDFI GLPKS
Sbjct: 659 ENIYWIGMQKRVRDFVRACEVY--------------------------VSLDFIIGLPKS 692
Query: 719 QRVDCILVVVDR 730
+ D +LVVVDR
Sbjct: 693 KGFDAVLVVVDR 704
>IMGA|AC229695_21.1 RNA-directed DNA polymerase (Reverse
transcriptase); Polynucleotidyl transferase,
Ribonuclease H fold AC229695.5 96798-94993 H
EGN_Mt090430 20090702
Length = 555
Score = 571 bits (1471), Expect = e-163, Method: Compositional matrix adjust.
Identities = 280/580 (48%), Positives = 376/580 (64%), Gaps = 34/580 (5%)
Query: 288 MNDLFRPYLRKFVLVFFDDILVCSNSWDSXXXXXXXXXXXXCDNKLQLNQKKCFFGRKLV 347
MN++ RPYLRKF LVFFDDILV S + +++L N KKC FG+ +
Sbjct: 1 MNEVLRPYLRKFALVFFDDILVYSKDVEHHKHHLGAVLALLKEHQLVANYKKCTFGQHQL 60
Query: 348 EYLGHIISKDGVAMDPSKVSSILQWPIPKSTKAVRGFLGITGYYRRFIANYGQLARPLTT 407
EYLGHIIS GVA D KV +L WP PK K++RGFLG+TGYYRRF+ NYG +A+PLT
Sbjct: 61 EYLGHIISAQGVAADQKKVDVMLTWPRPKDLKSLRGFLGLTGYYRRFVRNYGSIAKPLTH 120
Query: 408 LLKDAQAKFAWPQDAQDAFIALKHAMTTSPVLAMPDFSKPFIVETDASKSGIGVVLHQDN 467
LLK + F W ++AQ +F LK AM P+L++P+FS PF++ETDAS +G+G +L Q
Sbjct: 121 LLK--KDNFLWNEEAQLSFDTLKKAMAELPILSVPNFSIPFVIETDASNTGLGAILMQQG 178
Query: 468 RPLAYFSKATGDPAMSRSAYENELMALVLAIRHWRPYLIGRCFTVRTDQKSLMHLLQQNV 527
RP+A+ S+ + A +S YE ELMA+V A++ WR YL+G F + TDQKSL L Q V
Sbjct: 179 RPVAFLSQPLSERAQRKSIYERELMAIVFAVQKWRHYLMGNHFIIHTDQKSLKFLQDQRV 238
Query: 528 STPAQQYWLAKLMGYNFNIEYKTEKTNRAADALSRCHDEVEFQAISGPQWIDWDAISKEI 587
Q W +KLMG++F I YK NRAADALSR + + AIS + D++ E+
Sbjct: 239 LGADQFKWTSKLMGFDFEIIYKPGSDNRAADALSR---RMTYAAISMIHFADYEEWEAEV 295
Query: 588 QQDSTLSKIISEISSGKPSQAHYSLIHGNLFYKGRLVLPPSSKWIPKIIEEFHSTPLGGH 647
D+ L II ++ + S +YS + LFYKG+LVLP +S IP +++E+HS+P+GGH
Sbjct: 296 MHDNKLQTIIHDLIADGASHPNYSFQNRKLFYKGKLVLPRNSSKIPTLLQEYHSSPIGGH 355
Query: 648 SGAYRSYKRVASNFYWPGMMGTIKKFVAACLICQTHKYEAKSPAGMFQPLPVPSQIWEDI 707
SG +R+YK++ + YW G+ I++FVA+C ICQ +KY+ SPAG+ QPLP+P+Q+W+DI
Sbjct: 356 SGFFRTYKKLGALVYWEGLKKDIQQFVASCEICQQNKYQTLSPAGLLQPLPIPTQVWKDI 415
Query: 708 ALDFITGLPKSQRVDCILVVVDRLSKYAHFLGLRHPFTAASVATLFMREIVRLHGLPVTI 767
++DFI GLP+S D I VVVDR +KYAHF+ L HPFTA SVA +F++E+VR
Sbjct: 416 SMDFIEGLPRSHGKDTIFVVVDRFTKYAHFIPLSHPFTAKSVAEVFVQEVVR-------- 467
Query: 768 VSDRDPLFLSNFWTELFRLQGTTPSFSTAYHPQSDGQTEVLNCSLESYLRCFSFEHPKSW 827
T FSTAYHPQ+DGQTEV N LE+YLRC + P+ W
Sbjct: 468 ---------------------TKLKFSTAYHPQTDGQTEVTNRCLETYLRCLTGAKPRLW 506
Query: 828 AKWLCWAEYWYNTNYQGAAKKTPFELVYGRPPPTLQRFLP 867
KWL WAE+W+N+NY + + TPF +YGR PP L R P
Sbjct: 507 VKWLGWAEFWFNSNYNSSTRTTPFNALYGRDPPHLIRETP 546
>IMGA|AC233082_1.1 Polynucleotidyl transferase, Ribonuclease H fold
AC233082.3 16225-8671 H EGN_Mt090430 20090702
Length = 695
Score = 433 bits (1114), Expect = e-121, Method: Compositional matrix adjust.
Identities = 250/575 (43%), Positives = 332/575 (57%), Gaps = 55/575 (9%)
Query: 421 DAQDAFIALKHAMTTSPVLAMPDFSKPFIVETDASKSGIGVVLHQDNRPLAYFSKATGDP 480
+A AF LK MTT PVL +PDFSK F+VETDAS IG VL Q+ PLA+FSK
Sbjct: 2 EADKAFTTLKIHMTTMPVLHLPDFSKTFVVETDASAVAIGAVLSQEGHPLAFFSKKMTPK 61
Query: 481 AMSRSAYENELMALVLAIRHWRPYLIGRCFTVRTDQKSLMHLLQQNVSTPAQQYWLAKLM 540
+ S Y E+ A+ +I TDQKSL +LL Q + TP QQ W +KL
Sbjct: 62 MQAASVYVREMFAVTESIY--------------TDQKSLRNLLLQKIQTPEQQKWASKLQ 107
Query: 541 GYNFNIEYKTEKTNRAADALSRCHDEVEFQAISGPQWIDWDAISKEIQQDSTLSKIISEI 600
G+NF I Y+ KTN AADALSR + QA IS S L II++
Sbjct: 108 GFNFEIHYRPGKTNLAADALSR-----KTQA----------TISILFTMTSPLPTIITQF 152
Query: 601 SSGKPSQAHYSLIHGNLFYKGRLVLPPSSKWIPKIIEEFHSTPLGGHSGAYRSYKRVASN 660
S+ +L+H L SS + I + L +G + R+A++
Sbjct: 153 QKFYASKGK-TLVHDLLAVNEDSHY--SSSPMDCCIIKTDCLYLITKTGP--TVARLAAS 207
Query: 661 FYWPGMMGTIKKFVAACLICQTHKYEAKSPAGMFQPLPVPSQIWEDIALDFITGLPKSQR 720
FYWPG+ +K+FV C CQ K + + G+ Q LP+PSQ+WE++ +DFIT LP S
Sbjct: 208 FYWPGLYTAVKEFVKNCATCQQSKNQTQKKLGLLQALPIPSQVWEELTMDFITHLPNSFG 267
Query: 721 VDCILVVVDRLSKYAHFLGLRHPFTAASVATLFMREIVRLHGLPVTIVSDRDPLFLSNFW 780
I V+ DRL+KY HF+ L FTA +A F EI RLHG+P TI+SDRDPLFLS FW
Sbjct: 268 HTVIWVICDRLTKYVHFIALPSKFTAEDLANRFSVEICRLHGIPKTIISDRDPLFLSKFW 327
Query: 781 TELFRLQGTTPSFSTAYHPQSDGQTEVLNCSLESYLRCFSFEHPKSWAKWLCWAEYWYNT 840
ELF+ QGT FSTAYHP++DGQTEV+N +LESYLRCF +N+
Sbjct: 328 KELFKTQGTQLRFSTAYHPETDGQTEVVNRTLESYLRCF------------------HNS 369
Query: 841 NYQGAAKKTPFELVYGRPPPTLQRFLPGETRVEALSQHLQDRDKILQQLRYNLHRAQQLM 900
A + TPF+ +YGRPPP + ++ G + + +L + LQ R +LQQL+ NL ++++ M
Sbjct: 370 TVHSATQLTPFQALYGRPPPKIPDYVTGSSSITSLEESLQARHLVLQQLKKNLTKSRKQM 429
Query: 901 TKYANPKRRDVQFSIGERVFHKLRPHRQQSVANRVNDKLAARFYGPFEVLKKVGAVAYKL 960
AN KRRD F++G+ V +L+P+RQ +V R + KLA RF+GPF VL+++G+VAYKL
Sbjct: 430 EVQANKKRRDHTFNVGDLVLLRLQPYRQSTVQRRSSQKLAKRFFGPFHVLERIGSVAYKL 489
Query: 961 QLPLXSKIHPVFHVSQLKRVIGNH---PVIAQLSD 992
LP SKIHPV H+S L+ G P LSD
Sbjct: 490 DLPPDSKIHPVVHISLLRPYYGGTQPGPAPVALSD 524
>IMGA|Medtr6g028320.1 Polynucleotidyl transferase, Ribonuclease H
fold chr06_pseudomolecule_IMGAG_V3 6407540-6406225 E
EGN_Mt090430 20090702
Length = 379
Score = 397 bits (1020), Expect = e-110, Method: Compositional matrix adjust.
Identities = 185/378 (48%), Positives = 256/378 (67%)
Query: 607 QAHYSLIHGNLFYKGRLVLPPSSKWIPKIIEEFHSTPLGGHSGAYRSYKRVASNFYWPGM 666
Q Y+ G L++K R+ +P + +W I+ EFHSTP GHSG + R++++F WPG
Sbjct: 2 QQMYTFKDGLLYFKDRIYVPDTQQWRTTIMTEFHSTPTAGHSGLKPTLSRLSASFLWPGT 61
Query: 667 MGTIKKFVAACLICQTHKYEAKSPAGMFQPLPVPSQIWEDIALDFITGLPKSQRVDCILV 726
+K+F+ C CQ +KY G+ QPLP+P ++W+++ +DFIT LP S R + V
Sbjct: 62 YTDVKQFIRNCHTCQQNKYMLTKKQGLLQPLPIPDKVWDELTMDFITHLPASFRHTVVWV 121
Query: 727 VVDRLSKYAHFLGLRHPFTAASVATLFMREIVRLHGLPVTIVSDRDPLFLSNFWTELFRL 786
+ DRLSKY HF+ L F A +A F EI RLHG+P TI SDRDPLFLS FW ELFR
Sbjct: 122 ICDRLSKYVHFIALPTKFAAQDLANRFSTEICRLHGIPKTITSDRDPLFLSQFWKELFRT 181
Query: 787 QGTTPSFSTAYHPQSDGQTEVLNCSLESYLRCFSFEHPKSWAKWLCWAEYWYNTNYQGAA 846
QGT +ST YHP++DGQTEV+N SLE+YLRCF+ +HPK W K+L AE+WYN+++ A
Sbjct: 182 QGTIMQYSTTYHPETDGQTEVVNRSLETYLRCFASDHPKHWFKFLHLAEFWYNSSFHTAI 241
Query: 847 KKTPFELVYGRPPPTLQRFLPGETRVEALSQHLQDRDKILQQLRYNLHRAQQLMTKYANP 906
+ +PFE +YGR PPT+ ++ +T++ L+ +LQ+R IL L+ NL R +QLM AN
Sbjct: 242 QMSPFEALYGRTPPTILDYVANQTQIPQLNANLQNRQTILTTLKQNLRRTRQLMEVQANK 301
Query: 907 KRRDVQFSIGERVFHKLRPHRQQSVANRVNDKLAARFYGPFEVLKKVGAVAYKLQLPLXS 966
KRRD F G+ V +L+P+RQQ+V RV KL+ RF+GPF V++++G+VAY+L LP S
Sbjct: 302 KRRDCVFYPGDLVLLRLQPYRQQTVQRRVGPKLSKRFFGPFIVIRRIGSVAYELDLPPSS 361
Query: 967 KIHPVFHVSQLKRVIGNH 984
KIH V H+SQL+ G H
Sbjct: 362 KIHLVVHISQLRAYHGEH 379
>IMGA|Medtr3g026370.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
7081109-7063368 E EGN_Mt090430 20090702
Length = 377
Score = 370 bits (949), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/392 (48%), Positives = 252/392 (64%), Gaps = 24/392 (6%)
Query: 174 MLSAGIIKXXXXXXXXXVLLVKKKDGSWRFCVDYRQLNRSTIPHKYLIPIIQELLDELHS 233
MLS+G+I+ VLLVKKK GSWR CVDYR LN I ++ +P I ELLD+L
Sbjct: 1 MLSSGLIQPSRGPFSSHVLLVKKKVGSWRCCVDYRALN--AIKDRFPLPTIDELLDDLGK 58
Query: 234 SQVFSKLDLKSGFYQIRVAETNTPKTAFWTHSGHYEFLVMPFGLTNAPATFQAVMNDLFR 293
+ FSKLDL+ GF+QIR+A + PKTAF TH GHYE VMPFGL NAP+TF++ MN+LF+
Sbjct: 59 ASWFSKLDLQQGFHQIRMAPEDIPKTAFRTHHGHYECKVMPFGLCNAPSTFKSTMNNLFQ 118
Query: 294 PYLRKFV---LVFFDDILVCSNSWDSXXXXXXXXXXXXCDNKLQLNQKKCFFGRKLVEYL 350
P+LRKF L IL + + L Q KC FG++ +EYL
Sbjct: 119 PFLRKFAADHLTHLQLILT-----------------KLLEAQFFLKQSKCLFGQRQLEYL 161
Query: 351 GHIISKDGVAMDPSKVSSILQWPIPKSTKAVRGFLGITGYYRRFIANYGQLARPLTTLLK 410
GHIIS+ G+ DPSK+ ++++WP P ST +R FLG+TG+YR+FI Y +A PLT LLK
Sbjct: 162 GHIISQKGIQADPSKLQAMVEWPQPTSTTLLRRFLGLTGFYRKFIKGYASIAAPLTNLLK 221
Query: 411 DAQAKFAWPQDAQDAFIALKHAMTTSPVLAMPDFSKPFIVETDASKSGIGVVLHQDNRPL 470
+ F W +A+ +F LK AMT +P LA+PDF+ PF +ETDAS +G VL Q N P+
Sbjct: 222 --KDSFIWSPEAEHSFQTLKKAMTEAPTLAVPDFTLPFDLETDASAKAMGAVLMQQNHPI 279
Query: 471 AYFSKATGDPAMSRSAYENELMALVLAIRHWRPYLIGRCFTVRTDQKSLMHLLQQNVSTP 530
A+FSK + S Y EL A+ A++ WR YL+G FT+ TD KSL L+ Q + TP
Sbjct: 280 AFFSKQLCQRLLRSSTYVRELHAITTAVKKWRQYLLGHPFTIHTDHKSLKELISQVIQTP 339
Query: 531 AQQYWLAKLMGYNFNIEYKTEKTNRAADALSR 562
QQ +L+KL+GY+ I++K+ KTN ADALSR
Sbjct: 340 EQQVYLSKLLGYDVKIQFKSGKTNVVADALSR 371
>IMGA|Medtr4g073750.1 Polynucleotidyl transferase, Ribonuclease H
fold chr04_pseudomolecule_IMGAG_V3 14702670-14703735 H
EGN_Mt090430 20090702
Length = 331
Score = 338 bits (866), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 157/345 (45%), Positives = 226/345 (65%), Gaps = 23/345 (6%)
Query: 610 YSLIHGNLFYKGRLVLPPSSKWIPKIIEEFHSTPLGGHSGAYRSYKRVASNFYWPGMMGT 669
Y+ LF+ RLVLP S IP +++++HS+ +GGHS +R+YKR+ + YW GM
Sbjct: 10 YTFKDRKLFFIDRLVLPKGSSRIPNLLKDYHSSAVGGHSRFFRTYKRIYAIIYWEGMRKD 69
Query: 670 IKKFVAACLICQTHKYEAKSPAGMFQPLPVPSQIWEDIALDFITGLPKSQRVDCILVVVD 729
I++ VA C CQ +KY+ SP G+ QPLP+P+Q+W DI++DFI GLPK+
Sbjct: 70 IQQIVATCETCQLNKYQTLSPTGLLQPLPIPTQVWTDISMDFIEGLPKA----------- 118
Query: 730 RLSKYAHFLGLRHPFTAASVATLFMREIVRLHGLPVTIVSDRDPLFLSNFWTELFRLQGT 789
H + VA F++E+++LHG P TIVSDRD +FLS+FW+ELFR GT
Sbjct: 119 ------------HGKKSKDVAESFIKEVIKLHGFPSTIVSDRDKIFLSHFWSELFRTAGT 166
Query: 790 TPSFSTAYHPQSDGQTEVLNCSLESYLRCFSFEHPKSWAKWLCWAEYWYNTNYQGAAKKT 849
FS+AYHPQ+DGQTEV N LE+YLRC + PK W KWL WA++W+NTNY + K+T
Sbjct: 167 KLKFSSAYHPQTDGQTEVANRCLETYLRCLTGTKPKQWRKWLGWADFWFNTNYNSSLKQT 226
Query: 850 PFELVYGRPPPTLQRFLPGETRVEALSQHLQDRDKILQQLRYNLHRAQQLMTKYANPKRR 909
PF+ +YGR PP L + + VE ++ +RD+IL L+ NL +A + M YA+ RR
Sbjct: 227 PFKTLYGRDPPLLLKGTTIPSLVEEVNVLTDERDQILHDLKQNLVKALEQMKAYADKSRR 286
Query: 910 DVQFSIGERVFHKLRPHRQQSVANRVNDKLAARFYGPFEVLKKVG 954
V F+ G+ V+ KL+P+R +S+A + N+KL RFYGP++++K++G
Sbjct: 287 SVNFTNGDWVYLKLQPYRLKSLAKKRNEKLNHRFYGPYQIIKQIG 331
>IMGA|Medtr3g026360.1 Polynucleotidyl transferase, Ribonuclease H fold
chr03_pseudomolecule_IMGAG_V3 7063133-7061964 H
EGN_Mt090430 20090702
Length = 356
Score = 289 bits (739), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 159/374 (42%), Positives = 214/374 (57%), Gaps = 39/374 (10%)
Query: 649 GAYRSYKRVASNFYWPGMMGTIKKFVAACLICQTHKYEAKSPAGMFQPLPVPSQIWEDIA 708
G ++Y R+ NF+W GM ++KFV+ C ICQT KYE K P G+ QPLP+PS IWED++
Sbjct: 2 GTQKTYLRLFDNFFWQGMRTDVQKFVSECSICQTTKYETKKPTGLLQPLPLPSAIWEDLS 61
Query: 709 LDFITGLPKSQRVDCILVVVDRLSKYAHFLGLRHPFTAASVATLFMREIVRLHGLPVTIV 768
LDFITGLP S ILVV R SK AHF L ++A
Sbjct: 62 LDFITGLPPSHGFSVILVVAGRFSKGAHFGALPTNYSA---------------------- 99
Query: 769 SDRDPLFLSNFWTELFRLQGTTPSFSTAYHPQSDGQTEVLNCSLESYLRCFSFEHPKSWA 828
+ ELF+L GT STAYHPQ+DGQTEVLN LE Y+R F P W
Sbjct: 100 -----------FKELFKLCGTKLRMSTAYHPQTDGQTEVLNRVLEQYIRSFVHNKPNQWY 148
Query: 829 KWLCWAEYWYNTNYQGAAKKTPFELVYGRPPPTLQRFLPGETRVEALSQHLQDRDKILQQ 888
+L AE+ YNT+ A +PF + Y + PP++ +L G +R+EA+ L R IL
Sbjct: 149 SFLPLAEWSYNTSIHSATGFSPFYVTYDKEPPSIPNYLIGSSRIEAVDTLLSSRQDILTI 208
Query: 889 LRYNLHRAQQLMTKYANPKRRDVQFSIGERVFHKLRPHRQQSVANRVNDKLAARFYGPFE 948
L L +AQ+ M YA+ KRRD+ F+IG+ V+ KLRP+RQQS+ KL+ R+YGP++
Sbjct: 209 LTKKLLKAQERMKHYADKKRRDITFNIGDFVYVKLRPYRQQSITGTTYSKLSKRYYGPYQ 268
Query: 949 VLKKVGAVAYKLQLPLXSKIHPVFHVSQLKRVIGNHPVIAQLSDGLDIEA---GPLVEPY 1005
++ K+G VA+KLQLP +K H VFH S LK G + +D L EA PL++P
Sbjct: 269 IIDKMGPVAFKLQLPPNTKTHLVFHCSLLKPHKGP---LHNSADQLPPEAFGNQPLIQPL 325
Query: 1006 KVCQRRSLHSTSGP 1019
+ + + ST+ P
Sbjct: 326 TLLESKLDVSTTPP 339
>IMGA|Medtr3g061900.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 14169077-14168364 H
EGN_Mt090430 20090702
Length = 237
Score = 244 bits (623), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 111/235 (47%), Positives = 159/235 (67%)
Query: 666 MMGTIKKFVAACLICQTHKYEAKSPAGMFQPLPVPSQIWEDIALDFITGLPKSQRVDCIL 725
M+ +K +V C ICQ +K G+ QPLP+P Q WEDI++DF+T LP S I
Sbjct: 1 MIKDVKNYVKTCEICQANKASNHKSYGLLQPLPIPQQAWEDISMDFVTHLPPSNGKTTIW 60
Query: 726 VVVDRLSKYAHFLGLRHPFTAASVATLFMREIVRLHGLPVTIVSDRDPLFLSNFWTELFR 785
V+VDR SK AHF+ L +TA S+A LF+ EI RLHG+P TIVSDRD +F+S FW E+FR
Sbjct: 61 VIVDRFSKSAHFIPLPTHYTAMSLAPLFLTEIYRLHGMPKTIVSDRDRIFVSKFWKEIFR 120
Query: 786 LQGTTPSFSTAYHPQSDGQTEVLNCSLESYLRCFSFEHPKSWAKWLCWAEYWYNTNYQGA 845
L GTT +FS+AYHP+SDGQTEV+N L++YLRCF+++ P W +L AE+WYN++YQ +
Sbjct: 121 LSGTTLAFSSAYHPESDGQTEVVNRILQTYLRCFAYDAPNRWLNYLHLAEFWYNSSYQSS 180
Query: 846 AKKTPFELVYGRPPPTLQRFLPGETRVEALSQHLQDRDKILQQLRYNLHRAQQLM 900
+ +PF+ VYGR P ++ ++ G ++ + + L R ++ + L+ NL +M
Sbjct: 181 IRMSPFQAVYGRAPMSVATYIRGSAQIATVDEALTRRMQLSRLLKENLGMGMGVM 235
>IMGA|AC229695_24.1 Chromo AC229695.5 111963-111064 H EGN_Mt090430
20090702
Length = 299
Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 132/208 (63%)
Query: 815 YLRCFSFEHPKSWAKWLCWAEYWYNTNYQGAAKKTPFELVYGRPPPTLQRFLPGETRVEA 874
YLRCF+ + P W+K L WAE+WYN++YQ + TPF++VYGR PP L ++ +
Sbjct: 2 YLRCFAGQAPNKWSKLLDWAEFWYNSSYQCSIGMTPFKVVYGRDPPILIKYDTAADVTPS 61
Query: 875 LSQHLQDRDKILQQLRYNLHRAQQLMTKYANPKRRDVQFSIGERVFHKLRPHRQQSVANR 934
L L +RD+ LQ L+ NLHRAQQ+M KYA+ KRR +F +G+ V KL+P+RQ S+A
Sbjct: 62 LQSLLVERDETLQLLKVNLHRAQQIMKKYADSKRRFAEFQVGDMVLVKLQPYRQHSLALH 121
Query: 935 VNDKLAARFYGPFEVLKKVGAVAYKLQLPLXSKIHPVFHVSQLKRVIGNHPVIAQLSDGL 994
N KL R++GPF V++++G VAYKL LP +KIH VFH+ LK G+H +
Sbjct: 122 QNQKLGLRYFGPFPVIQRIGLVAYKLLLPPSAKIHLVFHIVNLKPCKGDHTMQYLPLPLT 181
Query: 995 DIEAGPLVEPYKVCQRRSLHSTSGPIPQ 1022
E GP+++P + Q R+L +PQ
Sbjct: 182 TTETGPVLQPEDILQSRTLLVNGKQVPQ 209
>IMGA|Medtr6g077060.1 RNA-directed DNA polymerase (Reverse
transcriptase); Ribonuclease H
chr06_pseudomolecule_IMGAG_V3 15141903-15146629 E
EGN_Mt090430 20090702
Length = 1200
Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/403 (30%), Positives = 199/403 (49%), Gaps = 13/403 (3%)
Query: 191 VLLVKKKDGSWRFCVDYRQLNRSTIPHKYLIPIIQELLDELHSSQVFSKLDLKSGFYQIR 250
++ V KKDG R VD+R LN+++ + +P I L+D S+VFS +D SG+ QI+
Sbjct: 144 IVPVPKKDGKVRMSVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIK 203
Query: 251 VAETNTPKTAFWTHSGHYEFLVMPFGLTNAPATFQAVMNDLFRPYLRKFVLVFFDDILVC 310
++ + KT+F T G + + VMPFGL NA AT+Q M LF + K V V+ DD++V
Sbjct: 204 MSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVK 263
Query: 311 SNSWDSXXXXXXXXXXXXCDNKLQLNQKKCFFGRKLVEYLGHIISKDGVAMDPSKVSSIL 370
S + KL+LN KC FG + + LG I+S+ G+ +DP KV +I
Sbjct: 264 STDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIR 323
Query: 371 QWPIPKSTKAVRGFLGITGYYRRFIANYGQLARPLTTLLKDAQAKFAWPQDAQDAFIALK 430
+ P P++ K VRGFLG Y RFI++ P+ LL+ Q W + Q+AF ++K
Sbjct: 324 EMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQP-VVWNDECQEAFDSIK 382
Query: 431 HAMTTSPVLAMPDFSKPFIVETDASKSGIGVVLHQDNR------PLAYFSKATGDPAMSR 484
+ + P+L P +P I+ +G VL Q + + Y SK D
Sbjct: 383 NYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRY 442
Query: 485 SAYENELMALVLAIRHWRPYLIGRCFTVRTDQKSLMHLLQQNVSTPAQQYWLAKLMGYNF 544
+ E AL A + R YL+ + + + ++ ++ T W +++ +
Sbjct: 443 TMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARW--QMLLSEY 500
Query: 545 NIEYKTEKTNRAADALSRCHDEVEFQAISGPQWIDWDAISKEI 587
I +KT+K + S D + +Q + Q I++D +EI
Sbjct: 501 YIVFKTQKAIKG----SILADHLAYQPLDDYQPIEFDFPDEEI 539
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 143/361 (39%), Gaps = 31/361 (8%)
Query: 612 LIHGNLFYKGR----LVLPPSSKWIPKIIEEFHSTPLGGH-SGAYRSYKRVASNFYWPGM 666
L++G++ YK L+ +++ + H G H +G S K + + +YW M
Sbjct: 763 LLNGDILYKRNYDMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAM 822
Query: 667 MGTIKKFVAACLICQTHKYEAKSPAGMFQPL--PVPSQIWEDIALDFITGL-PK-SQRVD 722
++ C CQ + + P + P P +W +D I + PK S
Sbjct: 823 EHDCYQYARKCHKCQIYADKIHVPPHALNVISSPWPFSMW---GIDMIGRIEPKASNGHR 879
Query: 723 CILVVVDRLSKYAHFLGLRHPFTAASVATLFMREIVRLHGLPVTIVSDRDPLFLSNFWTE 782
ILV +D +K+ + T VA I+ +G+P I++D +N
Sbjct: 880 FILVAIDYFTKWVEAASYAN-VTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQA 938
Query: 783 LFRLQGTTPSFSTAYHPQSDGQTEVLNCSLESYLRCFSFEHPKSWAKWLCWAEYWYNTNY 842
L S+ Y PQ +G E N +++ ++ + K W + L +A + Y T
Sbjct: 939 LCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVTTY-KDWHEMLPYALHGYRTTV 997
Query: 843 QGAAKKTPFELVYGRPP--------PTLQRFLPGETRVEALSQHLQDRDKILQQLRYN-L 893
+ + TPF LVYG P+L+ + + Q D+ ++++ R + +
Sbjct: 998 RSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAM 1057
Query: 894 HRAQQLMTKYANPKRRDV---QFSIGERVFHKLRPHRQQSVANRVNDKLAARFYGPFEVL 950
R Q + + V +F +GE V R+ S DK + GP+ V
Sbjct: 1058 ARGQSYQARMKTAFDKKVHPREFKVGELVL-----KRRVSQQPDPRDKWTPNYEGPYVVK 1112
Query: 951 K 951
K
Sbjct: 1113 K 1113
>IMGA|AC233082_3.1 RNA-directed DNA polymerase (Reverse
transcriptase); Peptidase aspartic, active site;
Retrotransposon gag protein AC233082.3 19216-16757 H
EGN_Mt090430 20090702
Length = 819
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 135/242 (55%), Gaps = 10/242 (4%)
Query: 1 GVCSNLQLFLGSYTISGDFFIFPLRGVDIILGVAWLETLGDVQVNWQRLTMKFLHQNQLV 60
G+C ++ L L + S F++FP+ G D++LG+AWL TLG + ++ ++ F++QN+ +
Sbjct: 581 GICPDVPLTLQNKIFSLPFYLFPIEGADVVLGMAWLRTLGPIHADFAIPSITFIYQNESI 640
Query: 61 ELCGDPSLTRGTILAKSFSKV-----RNVSFSTVLLELSIDPPPISCVSTVENSDSESQQ 115
L GDP R ++ +V + S LL PP + + + +
Sbjct: 641 TLQGDP---RQQPTQSTYPQVCHLLHTDAIASLHLLTFQPSQPPTQDKTPLPTATDPA-- 695
Query: 116 LQELLAAHAFVFQEIYGLPPRRSTDHRIALQPGQGPISVKPYRYGHIQKDEIERLVHDML 175
+ LL+ VF + +GLPP R DH I L P PI+VKPYRY H QKD + L+ DML
Sbjct: 696 VANLLSEFPSVFLKPHGLPPSRPHDHHIPLLPNTPPINVKPYRYPHSQKDAMTTLIRDML 755
Query: 176 SAGIIKXXXXXXXXXVLLVKKKDGSWRFCVDYRQLNRSTIPHKYLIPIIQELLDELHSSQ 235
G I VLLV+KKDG+WRFCVDYR LN T+ ++ IP I ELLDEL ++
Sbjct: 756 QNGTIMPSTSPFSSPVLLVRKKDGTWRFCVDYRALNAVTVKDRFPIPTIDELLDELGAAT 815
Query: 236 VF 237
+F
Sbjct: 816 IF 817
>IMGA|Medtr2g021830.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr02_pseudomolecule_IMGAG_V3
5672480-5674573 E EGN_Mt090430 20090702
Length = 253
Score = 149 bits (377), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 120/207 (57%)
Query: 191 VLLVKKKDGSWRFCVDYRQLNRSTIPHKYLIPIIQELLDELHSSQVFSKLDLKSGFYQIR 250
++ V KKDG R CVD+R LN+++ + +P I L+D S+VFS +D SG+ QI+
Sbjct: 12 IVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIK 71
Query: 251 VAETNTPKTAFWTHSGHYEFLVMPFGLTNAPATFQAVMNDLFRPYLRKFVLVFFDDILVC 310
++ + KT+F T G + + VMPFGL NA AT+Q M LF + K V V+ DD++V
Sbjct: 72 MSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVK 131
Query: 311 SNSWDSXXXXXXXXXXXXCDNKLQLNQKKCFFGRKLVEYLGHIISKDGVAMDPSKVSSIL 370
S + KL+LN KC FG + + LG ++S+ G+ +DP KV +I
Sbjct: 132 STDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFVVSQKGIEVDPDKVRAIR 191
Query: 371 QWPIPKSTKAVRGFLGITGYYRRFIAN 397
+ P P++ K VRGFLG Y RFI++
Sbjct: 192 EMPAPQTEKQVRGFLGRLNYISRFISH 218
>IMGA|Medtr3g061740.1 RNA-directed DNA polymerase (Reverse
transcriptase); Ribonuclease H
chr03_pseudomolecule_IMGAG_V3 14037305-14035821 H
EGN_Mt090430 20090702
Length = 479
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 160/328 (48%), Gaps = 5/328 (1%)
Query: 192 LLVKKKDGSWRFCVDYRQLNRSTIPHKYLIPIIQELLDELHSSQVFSKLDLKSGFYQIRV 251
+LVKK++G WR CVDY LN + Y +P I L+D + S +D SG+ QIR+
Sbjct: 35 VLVKKENGKWRMCVDYTDLNMVCPKYPYPLPNIDHLIDNASGFKTLSFMDAYSGYNQIRM 94
Query: 252 AETNTPKTAFWTHSGHYEFLVMPFGLTNAPATFQAVMNDLFRPYLRKFVLVFFDDILVCS 311
+ PKTAF T++ +Y + VM FGL NA ATFQ M+ F + + V+ DD++ +
Sbjct: 95 DPLDAPKTAFMTNTKNYHYEVMYFGLKNAGATFQRSMDTAFSQQIGRNREVYIDDLVAKT 154
Query: 312 NSWDSXXXXXXXXXXXXCDNKLQLNQKKCFFGRKLVEYLGHIISKDGVAMDPSKVSSILQ 371
S +++LN KC FG ++ ++LG ++++ G+ + K +I+
Sbjct: 155 KEGLSHTDDLEEILGQVRKYRIRLNPTKCSFGVQVGKFLGFLLTRWGIEANTDKCQAIIN 214
Query: 372 WPIPKSTKAVRGFLGITGYYRRFIANYGQLARPLTTLLKDAQAKFAWPQDAQDAFIALKH 431
P + K V+ G R ++ G A +K + KF W + +DAF +K
Sbjct: 215 MRSPSNVKEVQQLTGRLAALSRCLSCAGDKAFSFFASIKKKE-KFEWTAECEDAFQQIKM 273
Query: 432 AMTTSPVLAMPDFSKPFIVETDASKSGIGVVLHQDN----RPLAYFSKATGDPAMSRSAY 487
+++ P+L P+ + + S++ + VL +++ +P+ Y S+ +
Sbjct: 274 FLSSLPLLQRPNKNAIIFLYLVISENAMSTVLVEESEVGEKPIYYVSRVFKGAKLPYQKI 333
Query: 488 ENELMALVLAIRHWRPYLIGRCFTVRTD 515
E +A+V R RPY V+++
Sbjct: 334 ECLALAVVTTARKLRPYFQSHKIVVKSN 361
>IMGA|Medtr5g047510.1 Putative gag-pol polyprotein, identical,
chr05_pseudomolecule_IMGAG_V3 20065664-20063904 H
EGN_Mt090430 20090702
Length = 460
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 147/345 (42%), Gaps = 54/345 (15%)
Query: 361 MDPSKVSSILQWPIPKSTKAVRGFLGITGYYRRFIANYGQLARPLTTLLKDAQAKFAWPQ 420
+D KV +I WP P S R F G+ +YRRFI + + P+T L+ + K W
Sbjct: 169 VDEEKVRAIRDWPAPTSVTEKRSFHGLATFYRRFIRYFSIITAPITKCLE--KGKLKWGS 226
Query: 421 DAQDAFIALKHAMTTSPVLAMPDFSKPFIVETDASKSGIGVVLHQDNRPLAYFSKATGDP 480
+ + +F +K + +PVL +P+F K F VE D S
Sbjct: 227 EQEQSFALIKKKLCAAPVLPLPNFEKVFQVECDDS------------------------- 261
Query: 481 AMSRSAYENELMALVLAIRHWRPYLIGRCFTVRTDQKSLMHLLQQNV-STPAQQYWLAKL 539
A+R W YLI R F + TD ++L L Q V + A+
Sbjct: 262 ----------------ALRQWEHYLIHREFILFTDHQALKFLHSQKVINKDARSVGEFSA 305
Query: 540 MGYNFNIEYKTEKTNRAADALSRCHDEVEFQAISGPQWIDWDAISKEIQQDSTLSKIISE 599
+ F I++K N+ ADALSR F + +D++ + KE+ + K +
Sbjct: 306 KIFPFIIQHKYGALNKVADALSR---RAYFLVTLSQEVVDFECL-KELHESDAKFKELKA 361
Query: 600 ISSGKPSQAHYSLIHGNLFYKGRLVLPPSSKWIPKIIEEFHSTPLGGHSGAYRSYKRVAS 659
+P A + + G LF ++ P S K+I + HS L GH G ++ +
Sbjct: 362 KCKERPC-ADFYIREGYLF----ILCIPCSPLRDKLIRDLHSGGLSGHMGQDKTIASMEG 416
Query: 660 NFYWPGMMGTIKKFVAACLICQTHKYEAKSPAGMFQPLPVPSQIW 704
FYWP + + V C CQ K ++++ ++ LP+P IW
Sbjct: 417 RFYWPHLRKDVGTIVKKCYTCQVSKGQSQN-TCLYMSLPIPYDIW 460
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 133 LPPRRSTDHRIALQPGQGPISVKPYRYGHIQKDEIERLVHDMLSAGIIKXXXXXXXXXVL 192
LP R H+I L P ++ YR + + + + D+L G I+ VL
Sbjct: 26 LPSMRDIQHKIDLIPCSSLPNLPHYRMSSKENEIVREQIEDLLRKGFIRESMSSCDVPVL 85
Query: 193 LVKKKDGSWRFCVDYRQLNRSTIPHKYLIPIIQELLDELHSSQVFSKLDLKSGFYQIRVA 252
LV KK WR CV+ R +N+ TI +++ IP ++++LDE F +R+
Sbjct: 86 LVPKKGNQWRKCVESRVINKITIKYQFPIPRLEDMLDE---------------FQNLRIR 130
Query: 253 ETNTPKTAFWTHSGHYEFLVMPFGLTNAPATFQAVMNDL 291
+ +T F + G YE LVMPF L+NAP+TF +MN +
Sbjct: 131 PGDERQTYFKSKDGLYESLVMPFRLSNAPSTFMRLMNQV 169
>IMGA|AC137826_3.1 Polynucleotidyl transferase, Ribonuclease H fold
AC137826.21 8552-8028 H EGN_Mt090430 20090702
Length = 174
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 97/170 (57%)
Query: 794 STAYHPQSDGQTEVLNCSLESYLRCFSFEHPKSWAKWLCWAEYWYNTNYQGAAKKTPFEL 853
STAYHPQ+DGQ E LN +E YL CF EHP W + L WAE+ Y + +Q ++ PF+
Sbjct: 2 STAYHPQTDGQLEALNKCVEQYLHCFLAEHPHEWVRMLLWAEFLYTSTFQTSSGMRPFQA 61
Query: 854 VYGRPPPTLQRFLPGETRVEALSQHLQDRDKILQQLRYNLHRAQQLMTKYANPKRRDVQF 913
++GR PP + ++ + Q++ + L L++ L ++Q M + R Q
Sbjct: 62 LFGRKPPNIALYVLRIPCDNLIVQYMLCPNDSLNHLKFTLSKSQTHMKTSVDNGRTPDQL 121
Query: 914 SIGERVFHKLRPHRQQSVANRVNDKLAARFYGPFEVLKKVGAVAYKLQLP 963
G+ F K + +RQ S+ K + +++GP+++LK+ G VAYKLQLP
Sbjct: 122 DEGKWGFFKQKSYRQHSLMTTSQHKFSRKYFGPYKMLKRKGMVAYKLQLP 171
>IMGA|AC233082_2.1 RNA-directed DNA polymerase (Reverse
transcriptase) AC233082.3 16661-16311 H EGN_Mt090430
20090702
Length = 116
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 73/116 (62%)
Query: 273 MPFGLTNAPATFQAVMNDLFRPYLRKFVLVFFDDILVCSNSWDSXXXXXXXXXXXXCDNK 332
MPFGL+NAP++FQ+ MND+ RPYLR+FVLVFFDDIL+ S + N+
Sbjct: 1 MPFGLSNAPSSFQSAMNDMLRPYLRRFVLVFFDDILIYSTNMADHLIHLRLILDLLVTNQ 60
Query: 333 LQLNQKKCFFGRKLVEYLGHIISKDGVAMDPSKVSSILQWPIPKSTKAVRGFLGIT 388
KC F + V YLGH+IS GV DP KV++I WP P S A+RGFLG+T
Sbjct: 61 FVAKLSKCVFAVETVHYLGHVISAQGVKADPEKVTAITDWPKPHSLTALRGFLGLT 116
>IMGA|Medtr8g078520.1 RNA-directed DNA polymerase ; Chromo; Zinc
finger, CCHC-type; Peptidase aspartic, active site;
Polynucleotidyl transferase, Ribonuclease H fold,
related chr08_pseudomolecule_IMGAG_V3 15990427-15992497
H EGN_Mt090430 20090702
Length = 218
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 117/242 (48%), Gaps = 50/242 (20%)
Query: 423 QDAFIALKHAMTTSPVLAMPDFSKPFIVETDASKSGIGVVLHQDNRPLAYFSKATGDPAM 482
Q AF LKH T SPVLA+ FS+ F +E+DAS + +G +L Q RP+AYFSKA GD +
Sbjct: 25 QVAFEGLKHKGTASPVLALYYFSQEFYIESDASGNNLGAILLQKGRPIAYFSKALGDGNL 84
Query: 483 SRSAYENELMALVLAIRHWRPYLIGRCFTVRTDQKSLMHLLQQNVSTPAQQYWLAKLMGY 542
+++AYE +L+AL L+ +G
Sbjct: 85 TKAAYEKKLIALALSSN----------------------------------------IGV 104
Query: 543 NFNIEYKTEKTNRAADALSRCHDEVEFQA-ISGPQWIDWDAISKEIQQDSTLSKI-ISEI 600
+ + YK N+ DALSR HD E + ++ P+W++ KE+ ++ + + +
Sbjct: 105 HISRVYKPGLENKGVDALSRMHDNPELHSLVNHPEWLE----GKEVLLKGIIAALCLQKR 160
Query: 601 SSGKPSQAHYSLIHGNLFYKGRLVLPPSSKWIPKIIEEFHSTPLGGHSGAYRSYKRVASN 660
S +P + + G LFY+ RLVL +S F GHSG Y +Y+RVASN
Sbjct: 161 ESTRPG---FVYLRGVLFYEDRLVLAANSSGSQNCCWNFIHLQ-SGHSGFYCTYRRVASN 216
Query: 661 FY 662
Y
Sbjct: 217 IY 218
>IMGA|Medtr4g073740.1 polyprotein, putative
chr04_pseudomolecule_IMGAG_V3 14702170-14702511 H
EGN_Mt090430 20090702
Length = 113
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 71/109 (65%)
Query: 433 MTTSPVLAMPDFSKPFIVETDASKSGIGVVLHQDNRPLAYFSKATGDPAMSRSAYENELM 492
M P+L +PDFSK F +ETDAS G+G VL Q+ RP+A+ S+ D A S+ YE ELM
Sbjct: 1 MAELPILTVPDFSKVFTIETDASNKGLGAVLLQEGRPVAFHSQNLSDRAQSKLVYERELM 60
Query: 493 ALVLAIRHWRPYLIGRCFTVRTDQKSLMHLLQQNVSTPAQQYWLAKLMG 541
A+V A++ WR YL+GR F + TDQKSL L+ Q + Q W +KL+
Sbjct: 61 AIVTAVQKWRHYLLGRHFIILTDQKSLKLLVDQRLLNEEQFKWTSKLIN 109
>IMGA|Medtr4g155670.1 hypothetical protein
chr04_pseudomolecule_IMGAG_V3 38477709-38477161 H
EGN_Mt090430 20090702
Length = 182
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 58/79 (73%)
Query: 634 KIIEEFHSTPLGGHSGAYRSYKRVASNFYWPGMMGTIKKFVAACLICQTHKYEAKSPAGM 693
++++EFH+T GH+G +R+Y+R+A + YW G+MG + +FVA C +C KY A SP G+
Sbjct: 88 QLLQEFHTTLTRGHAGVFRTYRRIAQSLYWRGIMGAVTQFVAKCHVCWCSKYIAASPHGL 147
Query: 694 FQPLPVPSQIWEDIALDFI 712
+PLP+P +WE+I++D I
Sbjct: 148 LRPLPIPDDVWEEISMDVI 166
>IMGA|Medtr3g102240.1 RNA-directed DNA polymerase ; Chromo; Zinc
finger, CCHC-type; Peptidase aspartic, active site;
Polynucleotidyl transferase, Ribonuclease H fold,
related chr03_pseudomolecule_IMGAG_V3 24879955-24881562
H EGN_Mt090430 20090702
Length = 148
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 79/146 (54%), Gaps = 8/146 (5%)
Query: 518 SLMHLLQQNVSTPAQQYWLAKLMGYNFNIEYKTEKTNRAADALSRCHDEVEFQAISGPQW 577
++ + N+ T QQ W+AKL+G +F + YK E N ALSR +++E G +
Sbjct: 6 AIFYTFVHNIITGNQQEWIAKLLGLDFEVVYKVEVENTVVGALSRQDEDME-----GGRP 60
Query: 578 IDWDAISKEIQQDSTLSKIISEISSGKPSQAHYSLIHGNLFYKGRLVLPPSSKWIPKIIE 637
I D+ + DS L II I+ S+ YSL G LFYK LV+ S I ++
Sbjct: 61 IRPDS---DTVLDSALKGIIDTITVNTDSKGGYSLKGGTLFYKNILVISAKSAIIEDLLI 117
Query: 638 EFHSTPLGGHSGAYRSYKRVASNFYW 663
+FHS+P GGH G ++Y+R+A YW
Sbjct: 118 DFHSSPSGGHFGYLQTYRRMAGTLYW 143
>IMGA|Medtr5g062290.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr05_pseudomolecule_IMGAG_V3
21895306-21893422 E EGN_Mt090430 20090702
Length = 306
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 133/306 (43%), Gaps = 16/306 (5%)
Query: 277 LTNAPATFQAVMNDLFRPYLRKFVLVFFDDILVCSN-SWDSXXXXXXXXXXXXCDNKLQL 335
+ +P FQ M+ + + + + F L++ DDILV SN D ++ + L
Sbjct: 1 MKQSPGIFQRRMDTILKEF-KDFCLIYIDDILVFSNKDLDDHFKKVELVLNKCFEHGVVL 59
Query: 336 NQKKCFFGRKLVEYLGHIISKDGVAMDPSKVSSILQWPIP-KSTKAVRGFLGITGY--YR 392
++KK + + YLG I K M + + ++P K K ++ FLG+ Y Y
Sbjct: 60 SKKKAVVAQNKINYLGLEIEKGKFLMQKHVLEKLQKFPTKLKDKKELQRFLGLLTYISYE 119
Query: 393 RFIANYGQLARPLTTLLKDAQAKFAWPQDAQDAFIALKHAMTTSPVLAMPDFSKPFIVET 452
FI N ++ L LK + ++W +D + LK+ P L P I+ET
Sbjct: 120 GFIKNLAAESKLLQQKLK-KDSIWSWTEDDEVLITKLKNLCQDLPELYHPSDDDLIIIET 178
Query: 453 DASKSGIGVVLH-----QDNRPLA-YFSKATGDPAMSRSAYENELMALVLAIRHWRPYLI 506
DAS G V+ Q L Y S D ++ +E E +A++ + R Y++
Sbjct: 179 DASNKYWGGVMKAKPPGQKKELLCRYMSGTFSDSEINYPTHEKETLAVIRMLEKHRIYVL 238
Query: 507 GRCFTVRTDQKSLMHLLQQNVSTPAQQ----YWLAKLMGYNFNIEYKTEKTNRAADALSR 562
+ F VRTD + N +Q W KL YN++I + + N AD LSR
Sbjct: 239 DKEFIVRTDSTYVAGFKNINHKGTYKQGRLIRWQMKLAEYNYSISHIKGEKNVLADILSR 298
Query: 563 CHDEVE 568
+E +
Sbjct: 299 EWNEAK 304
>IMGA|Medtr4g062370.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr04_pseudomolecule_IMGAG_V3
12064249-12070465 E EGN_Mt090430 20090702
Length = 152
Score = 92.4 bits (228), Expect = 1e-18, Method: Composition-based stats.
Identities = 50/121 (41%), Positives = 74/121 (61%)
Query: 191 VLLVKKKDGSWRFCVDYRQLNRSTIPHKYLIPIIQELLDELHSSQVFSKLDLKSGFYQIR 250
++ V KKDG R CVD+R LN+++ + +P I L+D S+VFS +D SG+ QI+
Sbjct: 12 IVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIK 71
Query: 251 VAETNTPKTAFWTHSGHYEFLVMPFGLTNAPATFQAVMNDLFRPYLRKFVLVFFDDILVC 310
++ + KT+F T G + + VM FGL NA AT+Q M LF + K V V+ DD++V
Sbjct: 72 MSPEDREKTSFITPWGTFCYKVMSFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVK 131
Query: 311 S 311
S
Sbjct: 132 S 132
>IMGA|Medtr3g021280.1 gypsy/Ty-3 retroelement polyprotein;
69905-74404, related chr03_pseudomolecule_IMGAG_V3
5256964-5260122 E EGN_Mt090430 20090702
Length = 189
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 95/175 (54%), Gaps = 17/175 (9%)
Query: 849 TPFELVYGRPPPTLQRFLPGETRVEALSQHLQDRDKILQQLRYNLHRAQQLMTKYANPKR 908
TPF+ +YGR PP L + G++++++L++ L + +IL+ L+ NL +A+ M++ AN R
Sbjct: 2 TPFKALYGRKPPNLLPYTSGKSKIDSLNELLHTKSEILKVLKANLLKARNRMSQQANLHR 61
Query: 909 RDVQFSIGERVFHKLRPHRQQSVANRVNDKLAARFYGPFEVLKKVG------AVAYKLQL 962
+D F + V+ KL+P+RQ SV +R + KLA R+YGPF ++ ++G A A
Sbjct: 62 QDKSFEPDQWVYLKLQPYRQVSVRHRTSQKLAKRYYGPFRIICRIGKEGQSPAKATSENK 121
Query: 963 PLXSKIHPVFHVSQLKRVIGNHPVIA-----------QLSDGLDIEAGPLVEPYK 1006
L +P F++ R+ G V + Q S GL+ A P P K
Sbjct: 122 SLFQNQYPTFNLKNKIRLKGVGSVTSGLPKKMERKGKQNSSGLEDYAEPSGPPRK 176
>IMGA|Medtr6g065000.1 Polynucleotidyl transferase, Ribonuclease H fold
chr06_pseudomolecule_IMGAG_V3 12072998-12071101 H
EGN_Mt090430 20090702
Length = 201
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 88/196 (44%), Gaps = 41/196 (20%)
Query: 812 LESYLRCFSFEHPKSWAKWLCWAEYWYNTNYQGAAKKTPFELVYGRPPPTLQRFLPGETR 871
+ YL CF + P W +L WAE+ YN++ + +P++++Y
Sbjct: 40 VNKYLCCFVCDQPHKWGNFLHWAEWHYNSSIPTSTGVSPYQVLY---------------- 83
Query: 872 VEALSQHLQDRDKILQQLRYNLHRAQQLMTKYANPKRRDVQFSIGERVFHKLRPHRQQSV 931
VEA+ L R+ ILQ LR L +AQ M +YA+ R F +G+ VF K+RP+ + SV
Sbjct: 84 VEAVDVELNSREHILQVLRNKLPKAQDNMKQYADRHRIPHTFQVGDWVFFKIRPYWKTSV 143
Query: 932 ANRVNDKLAARFYGPFEVLKKVGAVAYKLQLPLXSKIHPVFHVSQLKRVIGNHPVIAQLS 991
+KL+ +YGP A +L LP + + N P+I LS
Sbjct: 144 VGHRMNKLSKHYYGPCH-----NASHTQLDLP--------------EETLNNQPIIQPLS 184
Query: 992 ------DGLDIEAGPL 1001
D++ P+
Sbjct: 185 ILDWKDSTEDVDTSPM 200
>IMGA|Medtr3g169300.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
44106402-44105385 H EGN_Mt090430 20090702
Length = 308
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Query: 141 HRIALQPGQGPISVKPYRYGHIQKDEIERLVHDMLSAG-IIKXXXXXXXXXVLLVKKKDG 199
H++ + PG ++ + + + E+ V D L I++ V+LVKK +G
Sbjct: 171 HQLTVDPGISVVAQRRRKQSPEKSVAAEKTVKDFLEEKFILEAKYTTWLSNVVLVKKSNG 230
Query: 200 SWRFCVDYRQLNRSTIPHKYLIPIIQELLDELHSSQVFSKLDLKSGFYQIRVAETNTPKT 259
WR VDY LNR Y +P I +L+D ++ S +D G+ QI + E + KT
Sbjct: 231 KWRMSVDYTDLNRVCPKDAYPLPNIDKLVDNSSGFKLLSFMDAYFGYNQIPMVEGDKMKT 290
Query: 260 AFWTHSGHYEFLVMPFGL 277
F T SG+Y + VMPFGL
Sbjct: 291 TFMTESGNYYYNVMPFGL 308
>IMGA|Medtr3g169290.1 Putative retroelement pol polyprotein,
chr03_pseudomolecule_IMGAG_V3 44105220-44104602 H
EGN_Mt090430 20090702
Length = 181
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 20/184 (10%)
Query: 333 LQLNQKKCFFGRKLVEYLGHIISKDGVAMDPSKVSSILQWPIPKSTKAVRGFLGITGYYR 392
++LN +KC FG + ++LG +++ G+ + K +I + P P S K ++ G+
Sbjct: 1 MRLNLEKCTFGVQAGKFLGFYLTERGIEANRDKCHAITELPTPHSKKCIQILNGMLIALS 60
Query: 393 RFIANYGQLARPLTTLLKDAQAKFAWPQDAQDAFIALKHAMTTSPVLAMPDFSKPFIVET 452
RF+A + A P LL+ + KF W + ++A LK ++ PVL S+P+
Sbjct: 61 RFVAKSAEHALPFFKLLRK-ETKFGWTDECENALNHLKETLSAPPVL-----SRPY---- 110
Query: 453 DASKSGIGVVLHQDNRPLAYFSKATGDPAMSRSAYENELMALVLAIRHWRPYLIGRCFTV 512
G VL+Q L+ S A G P + +AL++A R R Y + V
Sbjct: 111 ------EGEVLYQY---LSVSSNALG-PETRYQRIDKVALALLIAARRLRQYFLAHTVEV 160
Query: 513 RTDQ 516
RTDQ
Sbjct: 161 RTDQ 164
>IMGA|Medtr7g022550.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr07_pseudomolecule_IMGAG_V3
5661429-5660887 H EGN_Mt090430 20090702
Length = 180
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/178 (24%), Positives = 84/178 (47%)
Query: 205 VDYRQLNRSTIPHKYLIPIIQELLDELHSSQVFSKLDLKSGFYQIRVAETNTPKTAFWTH 264
V+Y L+R Y + I +L+D ++FS +D S + QI + + KT F
Sbjct: 3 VEYSDLSRVCPKDTYPLINIDKLVDNSSGYKLFSFMDFFSMYNQIPLDPKDEDKTTFMVE 62
Query: 265 SGHYEFLVMPFGLTNAPATFQAVMNDLFRPYLRKFVLVFFDDILVCSNSWDSXXXXXXXX 324
+G++ ++VM F L N T+Q +MN++F+ +R + V DD++V
Sbjct: 63 AGNHFYVVMSFKLKNVGVTYQRMMNEVFKDEIRDMLKVCMDDMIVKYREELDHMSHLNVV 122
Query: 325 XXXXCDNKLQLNQKKCFFGRKLVEYLGHIISKDGVAMDPSKVSSILQWPIPKSTKAVR 382
+ N + C FG K +++G +++ G+ ++P + + +P K ++
Sbjct: 123 FIKVRKYNMHSNLENCTFGVKAAKFMGLYLTEKGIKVNPDNFKAEVDMELPMKKKGIQ 180
>IMGA|Medtr3g059220.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
13291757-13291422 H EGN_Mt090430 20090702
Length = 111
Score = 73.6 bits (179), Expect = 5e-13, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 60/108 (55%)
Query: 204 CVDYRQLNRSTIPHKYLIPIIQELLDELHSSQVFSKLDLKSGFYQIRVAETNTPKTAFWT 263
C DY LN+ Y +P I +L+ + S +D SG+ +IR+ + KTAF T
Sbjct: 2 CTDYTNLNKVCPKDAYPLPSIDQLVHNTSRYDLLSFMDAYSGYNKIRMHLEDEEKTAFMT 61
Query: 264 HSGHYEFLVMPFGLTNAPATFQAVMNDLFRPYLRKFVLVFFDDILVCS 311
+Y + MPFGL N ATFQ +++ +F+ + K + V+ DD++V S
Sbjct: 62 DKANYCYKGMPFGLRNTGATFQRLVDKVFKSEIGKTIEVYVDDMVVKS 109
>IMGA|Medtr3g059210.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V3
13291307-13288982 H EGN_Mt090430 20090702
Length = 695
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 5/168 (2%)
Query: 353 IISKDGVAMDPSKVSSILQWPIPKSTKAVRGFLGITGYYRRFIANYGQLARPLTTLLKDA 412
++++ GV ++P K +I+ P K V+ G RF++ P LL
Sbjct: 1 MLTRRGVEVNPEKCKAIMDMRSPTDAKEVQKLTGRIASLTRFLSCSADKNLPFFQLLPKN 60
Query: 413 QAKFAWPQDAQDAFIALKHAMTTSPVLAMPDFSKPFI----VETDASKSGIGVVLHQDNR 468
+ F W ++ + AF LK +TT P+L P S P I V A S + + ++ +
Sbjct: 61 E-NFCWTEECEGAFQKLKEFLTTPPILVKPKLSAPLILYLAVSEHACSSALVQEVRKEQK 119
Query: 469 PLAYFSKATGDPAMSRSAYENELMALVLAIRHWRPYLIGRCFTVRTDQ 516
P+ + SK + E +ALV + R RPY VRT+Q
Sbjct: 120 PVYFTSKVLHGAEVRYQKIEKVALALVSSARKLRPYFQSHTIIVRTNQ 167
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 119/278 (42%), Gaps = 34/278 (12%)
Query: 589 QDSTLSKIISEISSGKPSQAHYSLIHGNLFYKG------RLVLPPSSKW-IPKIIEEFHS 641
+D L + S K + +I LF +G + + P +++ I ++ E
Sbjct: 343 KDDQLPMEEEQASKVKKRAIKFVVIAYQLFIRGFSSPHLKCLAPQQAEYVIAEVDEGVCG 402
Query: 642 TPLGGHSGAYRSYKRVASNFYWPGMMGTIKKFVAAC--LICQTHKYEAKSPAGMFQPLPV 699
T +GG + A + + + +YWP M K+V C LI SP F+
Sbjct: 403 THIGGRALAAKVLR---AGYYWPTMKEDCSKYVKKCDKLI---------SPWPFFK---- 446
Query: 700 PSQIWEDIALDFITGLPKSQ-RVDCILVVVDRLSKYAHFLGLRHPFTAASVATLFMREIV 758
W +D + P +Q ++ ++V VD +K+ + L TA + + ++I+
Sbjct: 447 ----W---GVDILGPFPLAQGQLKFLIVAVDYFTKWIE-VELVATITADRIKKFYWKKII 498
Query: 759 RLHGLPVTIVSDRDPLFLSNFWTELFRLQGTTPSFSTAYHPQSDGQTEVLNCSLESYLRC 818
GLP +V+D+ + S+ + G +F+ HPQS+GQ E N + L+
Sbjct: 499 CNFGLPAVLVTDKGTQYASSSMANFCKEWGIKLNFTLVKHPQSNGQAESANKVILQGLKK 558
Query: 819 FSFEHPKSWAKWLCWAEYWYNTNYQGAAKKTPFELVYG 856
W + L + Y+T + ++TPF +VYG
Sbjct: 559 RLEAAKGLWVEELPMVMWSYHTTPHSSTQETPFRIVYG 596
>IMGA|Medtr4g155680.1 RNA-directed DNA polymerase ; Chromo; Zinc
finger, CCHC-type; Peptidase aspartic, active site;
Polynucleotidyl transferase, Ribonuclease H fold,
putative chr04_pseudomolecule_IMGAG_V3 38478248-38477910
H EGN_Mt090430 20090702
Length = 95
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 57/102 (55%), Gaps = 19/102 (18%)
Query: 361 MDPSKVSSILQWPIPKSTKAVRGFLGITGYYRRFIANYGQLARPLTTLLKDAQAKFAWPQ 420
M+P K+S ILQWPI +F +YG++A+PLT LLK + + W
Sbjct: 1 MNPQKISGILQWPI-----------------LQFDEDYGKIAKPLTELLK--KGAWEWNA 41
Query: 421 DAQDAFIALKHAMTTSPVLAMPDFSKPFIVETDASKSGIGVV 462
+ + AF L+ ++T+PVLA+ DFSK F E D S G+G V
Sbjct: 42 ETEQAFRRLQTVLSTAPVLALTDFSKHFGNECDTSGKGLGAV 83
>IMGA|Medtr1g042380.1 Putative retroelement pol polyprotein,
chr01_pseudomolecule_IMGAG_V3 9682376-9683386 E
EGN_Mt090430 20090702
Length = 153
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 930 SVANRVNDKLAARFYGPFEVLKKVGAVAYKLQLPLXSKIHPVFHVSQLKRVIGNHPVIAQ 989
SV +R + KLA R+Y PF +++++G VAY+L LP S+IHPVFH+S LK G HP Q
Sbjct: 26 SVHHRSSQKLAKRYYSPFHIIRRIGKVAYELDLPASSRIHPVFHISLLKPCFG-HPST-Q 83
Query: 990 LSDGLDIEAGPLVEP 1004
+S D +A P P
Sbjct: 84 VSPIADPQAYPPANP 98
>IMGA|Medtr4g073730.1 Cyclin-like F-box
chr04_pseudomolecule_IMGAG_V3 14697263-14702014 H
EGN_Mt090430 20090702
Length = 581
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 67/137 (48%), Gaps = 25/137 (18%)
Query: 52 KFLHQNQLVE------LCGDPSLTRGTILAKSFSKVRNVSFSTVLLELSIDPPPISCVST 105
+F HQ+ + L G+ L R KS +K LLE
Sbjct: 458 RFNHQDNICAVDTTHILKGEAELQRAPASLKSIAKAIQDEGQGYLLE------------- 504
Query: 106 VENSDSESQQ------LQELLAAHAFVFQEIYGLPPRRSTDHRIALQPGQGPISVKPYRY 159
+N E QQ L+++L ++A VF+E GLPP R DH I L+ G +++PYRY
Sbjct: 505 YQNLQEEKQQEVRPEWLEKILTSYAEVFKEPQGLPPYRRHDHAIVLKEGANIPNLRPYRY 564
Query: 160 GHIQKDEIERLVHDMLS 176
H QK+EIE+LV DML+
Sbjct: 565 PHYQKNEIEKLVDDMLN 581
>IMGA|AC137826_27.1 hypothetical protein AC137826.21 98803-103811 H
EGN_Mt090430 20090702
Length = 400
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 73/178 (41%), Gaps = 57/178 (32%)
Query: 115 QLQELLAAHAFVFQEIYGLPPRRSTDHRIALQPGQGPISVKPYRYGHIQKDEIERLVHDM 174
Q +E+ + ++ G+ P R D I L+ G PI + YR +++ + ++
Sbjct: 262 QFREVCSTYSL------GMIPYRDIDFCIDLESGTYPIFITSYRMAPAMLTKLKAQIQEL 315
Query: 175 LSAGIIKXXXXXXXXXVLLVKKKDGSWRFCVDYRQLNRSTIPHKYLIPIIQELLDELHSS 234
F DYRQLNR T +KY +P+I +L ++LH
Sbjct: 316 ----------------------------FDKDYRQLNRVTTRNKYTLPLIDDLFNQLHE- 346
Query: 235 QVFSKLDLKSGFYQIRVAETNTPKTAFWTHSGHYEFLVMPFGLTNAP--ATFQAVMND 290
+ PK TH GHYEFLV+ FGLTNAP VMN+
Sbjct: 347 --------------------DVPKKVSRTHYGHYEFLVISFGLTNAPLLPIGNVVMNE 384
>IMGA|Medtr2g042450.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative chr02_pseudomolecule_IMGAG_V3
11896443-11896054 F EGN_Mt090430 20090702
Length = 86
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 41/76 (53%)
Query: 815 YLRCFSFEHPKSWAKWLCWAEYWYNTNYQGAAKKTPFELVYGRPPPTLQRFLPGETRVEA 874
YLRC F P W+K WAEYWYNT+Y +A TPF+ +YGR L R
Sbjct: 2 YLRCLMFTDPLKWSKAFPWAEYWYNTSYNISAAMTPFKALYGRDLSMLIRSKGSSKDTAD 61
Query: 875 LSQHLQDRDKILQQLR 890
L L R+++L QL+
Sbjct: 62 LQSQLAQREELLSQLQ 77
>IMGA|Medtr6g065010.1 reverse transcriptase, putative
chr06_pseudomolecule_IMGAG_V3 12073349-12073158 H
EGN_Mt090430 20090702
Length = 63
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 273 MPFGLTNAPATFQAVMNDLFRPYLRKFVLVFFDDILV 309
MPFGL NAP+ FQA+MN +F P+LR FV+VFFD IL+
Sbjct: 1 MPFGLCNAPSIFQAIMNQIFSPHLRCFVIVFFDAILI 37
>IMGA|Medtr6g077310.1 Polynucleotidyl transferase, Ribonuclease H
fold chr06_pseudomolecule_IMGAG_V3 15275871-15277296 E
EGN_Mt090430 20090702
Length = 445
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 138/367 (37%), Gaps = 47/367 (12%)
Query: 612 LIHGNLFYKGR----LVLPPSSKWIPKIIEEFHSTPLGGH-SGAYRSYKRVASNFYWPGM 666
L+ G++ YK L+ +++ + H G H +G S K + + +YW M
Sbjct: 77 LLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMTM 136
Query: 667 MGTIKKFVAACLICQTHKYEAKSPAGMFQPL--PVPSQIWEDIALDFITGL-PK-SQRVD 722
++ C CQ + + P + P P +W +D I + PK S
Sbjct: 137 EHDCYQYARKCHKCQIYADKIHVPPHALNVMSSPWPFSMW---GIDMIGRIEPKASNGHR 193
Query: 723 CILVVVDRLSKYAHFLGLRHPFTAASVATLFMREIVRLHGLPVTIVSDRDPLFLSNFWTE 782
ILV +D +K+ I+ +G+P I++D +N
Sbjct: 194 FILVAIDYFTKW-----------------FIKNNIICRYGVPSKIITDNGTNLNNNVVQA 236
Query: 783 LFRLQGTTPSFSTAYHPQSDGQTEVLNCSLESYLRCFSFEHPKSWAKWLCWAEYWYNTNY 842
L S+ Y PQ +G E N +++ ++ + K W + L +A + Y T
Sbjct: 237 LCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVTTY-KDWHEMLPYALHGYRTTV 295
Query: 843 QGAAKKTPFELVYGRPP--------PTLQRFLPGETRVEALSQHLQDRDKILQQLRYN-L 893
+ + TPF LVYG P+L+ + + Q D+ ++++ R + +
Sbjct: 296 RSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAM 355
Query: 894 HRAQQLMTKYANPKRRDV---QFSIGERVFHKLRPHRQQSVANRVNDKLAARFYGPFEVL 950
R Q + + V +F +GE V R+ S K + GP+ V
Sbjct: 356 ARGQSYQARMKTAFDKKVHPREFKVGELVL-----KRRVSQQPDPRGKWTPNYEGPYVVK 410
Query: 951 KKVGAVA 957
K A
Sbjct: 411 KAFSGGA 417
>IMGA|AC135504_3.1 polyprotein, putative AC135504.61 16846-17064 H
EGN_Mt090430 20090702
Length = 72
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 219 YLIPIIQELLDELHSSQVFSKLDLKSGFYQIRVAETNTPKTAFWTHSGHYEFLVMPFGLT 278
Y +P I +L+D ++FS +D S + QI +AE + KTAF T SG+Y + VMPFGL
Sbjct: 8 YPLPNIDKLVDNSSGYKLFSFMDTYSRYNQILMAEGDKKKTAFMTESGNYYYNVMPFGLR 67
Query: 279 NAPAT 283
N AT
Sbjct: 68 NMGAT 72
>IMGA|Medtr5g105390.1 Polynucleotidyl transferase, Ribonuclease H
fold chr05_pseudomolecule_IMGAG_V3 42329455-42328322 E
EGN_Mt090430 20090702
Length = 244
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 77/200 (38%), Gaps = 22/200 (11%)
Query: 659 SNFYWPGMMGTIKKFVAACLICQTHKYEAKSPAGMFQPL--PVPSQIWEDIALDFITGLP 716
+ ++WP M+ + +V C CQ H +P L P P W +A+D+ T
Sbjct: 3 AGYFWPTMLKDAQDYVNLCDKCQRHGDMHLAPPAELTSLISPWPFAWWGIVAIDYSTKWI 62
Query: 717 KSQRVDCILVVVDRLSKYAHFLGLRHPFTAASVATLFMREIVRLHGLPVTIVSDRDPLFL 776
+++ + I TA +V F R I+ G+P ++S+ F
Sbjct: 63 EAEPLAKI--------------------TAKNVLRFFKRNILARFGVPALVISNNGSQFT 102
Query: 777 SNFWTELFRLQGTTPSFSTAYHPQSDGQTEVLNCSLESYLRCFSFEHPKSWAKWLCWAEY 836
+ + R SF++ HPQ+ G E N + +R A+ L +
Sbjct: 103 DQKFQDYLRNIDIKQSFTSVEHPQAHGLAEAANRVILRGIRRRLDATKTKRAEELHTVLW 162
Query: 837 WYNTNYQGAAKKTPFELVYG 856
Y T ++PF L YG
Sbjct: 163 SYRTTPHSTTSESPFRLTYG 182
>IMGA|Medtr5g062240.1 Enzymatic polyprotein, related
chr05_pseudomolecule_IMGAG_V3 21860503-21859935 H
EGN_Mt090430 20090702
Length = 175
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 70/163 (42%), Gaps = 10/163 (6%)
Query: 416 FAWPQDAQDAFIALKHAMTTSPVLAMPDFSKPFIVETDASKSGIGVVLH-----QDNRPL 470
++W +D + LK+ P L P I+ETDAS G V+ Q L
Sbjct: 11 WSWTEDDEVLITKLKNLCQDLPELYHPSDDDLIIIETDASNKYWGGVMKAKPPGQKKELL 70
Query: 471 A-YFSKATGDPAMSRSAYENELMALVLAIRHWRPYLIGRCFTVRTDQKSLMHLLQQNVST 529
Y S D ++ +E E +AL+ + R Y++ + F VRTD + N
Sbjct: 71 CRYMSGTFSDSEINYPTHEKETLALIRMLEKHRIYVLDKEFIVRTDSTYVAGFKNINHKG 130
Query: 530 PAQQ----YWLAKLMGYNFNIEYKTEKTNRAADALSRCHDEVE 568
+Q W KL YN++I + + N AD LSR +E +
Sbjct: 131 TYKQGRLIRWQMKLAEYNYSISHIKGEKNVLADILSREWNEAK 173
>IMGA|Medtr4g080260.1 hypothetical protein
chr04_pseudomolecule_IMGAG_V3 16431754-16433070 E
EGN_Mt090430 20090702
Length = 84
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 900 MTKYANPKRRDVQFSIGERVFHKLRPHRQQSVANRVNDKLAARFYGPFEVLKKVGAVAYK 959
M + AN R D+ FS+G+ V+ KL P+RQ S+ + KL +F+ PF+VL + VAY+
Sbjct: 1 MVQQANKHRSDINFSVGDFVYLKLHPYRQVSMRSTSYHKLMPKFHSPFKVLDIISLVAYQ 60
Query: 960 L 960
L
Sbjct: 61 L 61
>IMGA|AC135504_4.1 gag-pol polyprotein, related AC135504.61
17375-18058 H EGN_Mt090430 20090702
Length = 227
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 11/203 (5%)
Query: 390 YYRRFIANYGQLARPLTTLLKDAQAKFAWPQDAQDAFIALKHAMTTSPVLAMPDFSKPFI 449
Y RFI Q A P LL+ + KF W ++A LK ++ PVL+ P+ +
Sbjct: 4 YLSRFIVKSTQHALPFLKLLRK-EIKFDWIDKCENALKHLKEILSAPPVLSRPEQGEVLY 62
Query: 450 VETDASKSGIGVVLHQDN----RPLAYFSKATGDPAMSRSAYENELMALVLAIRHWRPYL 505
+ S + + VL ++ + + + SK P E +AL+ A + R Y
Sbjct: 63 LYLSISSTAVSAVLIRETAEGQKSVYFTSKKLLGPETRNQKIEKVALALLTASQRLRQYF 122
Query: 506 IGRCFTVRTDQKSLMHLLQQNVSTPAQQYWLAKLMGYNFNIEYKTEKTNRA---ADALSR 562
V+ DQ L + NV+ + W +L F+I Y++ K +A AD L+
Sbjct: 123 FAHTVIVKIDQPIRQILGRPNVAGRMMK-WSLELS--EFDIHYESRKALKAQVFADFLTE 179
Query: 563 CHDEVEFQAISGPQWIDWDAISK 585
E+ ++D + SK
Sbjct: 180 MTFPTEYNTEEWTVFVDGSSNSK 202
>IMGA|Medtr5g084900.1 polyprotein, putative
chr05_pseudomolecule_IMGAG_V3 32359010-32358499 H
EGN_Mt090430 20090702
Length = 114
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 34/57 (59%)
Query: 504 YLIGRCFTVRTDQKSLMHLLQQNVSTPAQQYWLAKLMGYNFNIEYKTEKTNRAADAL 560
YL+ F +RT+QKSL L Q + T Q+ WL KL+ Y+F +EYK K N + L
Sbjct: 15 YLLRHKFFIRTNQKSLKALTDQIIETQEQEAWLHKLLEYDFTVEYKLRKHNACKELL 71
>IMGA|Medtr4g047410.1 gag-pol polyprotein, putative
chr04_pseudomolecule_IMGAG_V3 11043520-11043164 H
EGN_Mt090430 20090702
Length = 118
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 393 RFIANYGQLARPLTTLLKDAQAKFAWPQDAQDAFIALKHAMTTSPVLAMPDFSKPFI--- 449
RF+A Q A P LLK + KF W + + A LK++++ PVL+ PD +
Sbjct: 7 RFVAKSAQHALPFFNLLKK-ETKFEWTNECEKALQHLKNSLSAPPVLSRPDEGETLYLYL 65
Query: 450 -VETDASKSGIGVVLHQDNRPLAYFSKATGDPAMSRSAYENELMALVLAIR 499
V ++A + + + +P + SKA P E +ALV A R
Sbjct: 66 SVSSEAVSGTLNIETQEGQKPTYFTSKALLGPETRYQKIEKVALALVTAAR 116
>IMGA|Medtr4g047200.1 gag-pol polyprotein, putative
chr04_pseudomolecule_IMGAG_V3 10908500-10908144 H
EGN_Mt090430 20090702
Length = 118
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 393 RFIANYGQLARPLTTLLKDAQAKFAWPQDAQDAFIALKHAMTTSPVLAMPDFSKPFI--- 449
RF+A Q A P LLK + KF W + + A LK++++ PVL+ PD +
Sbjct: 7 RFVAKSAQHALPFFNLLKK-ETKFEWTNECEKALQHLKNSLSAPPVLSRPDEGETLYLYL 65
Query: 450 -VETDASKSGIGVVLHQDNRPLAYFSKATGDPAMSRSAYENELMALVLAIR 499
V ++A + + + +P + SKA P E +ALV A R
Sbjct: 66 SVSSEAVSGTLNIETQEGQKPTYFTSKALLGPETRYQKIEKVALALVTAAR 116