Jatropha Genome Database
- JcCB0018351.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0018351.30 - phase: 2 /partial
(82 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr5g045880.1 DNA-binding WRKY chr05_pseudomolecule_IMGAG... 83 3e-17
IMGA|Medtr7g011100.1 DNA-binding WRKY chr07_pseudomolecule_IMGAG... 71 1e-13
IMGA|Medtr4g115970.1 hypothetical protein chr04_pseudomolecule_I... 65 7e-12
IMGA|Medtr7g076980.1 DNA-binding WRKY chr07_pseudomolecule_IMGAG... 52 7e-08
IMGA|Medtr7g076990.1 DNA-binding WRKY chr07_pseudomolecule_IMGAG... 52 7e-08
IMGA|Medtr7g076990.2 DNA-binding WRKY chr07_pseudomolecule_IMGAG... 52 9e-08
IMGA|Medtr5g101900.1 DNA-binding WRKY chr05_pseudomolecule_IMGAG... 51 1e-07
IMGA|Medtr3g077040.1 DNA-binding WRKY chr03_pseudomolecule_IMGAG... 47 2e-06
IMGA|Medtr3g077040.2 DNA-binding WRKY chr03_pseudomolecule_IMGAG... 47 2e-06
IMGA|Medtr5g082420.1 DNA-binding WRKY chr05_pseudomolecule_IMGAG... 47 3e-06
>IMGA|Medtr5g045880.1 DNA-binding WRKY chr05_pseudomolecule_IMGAG_V3
19252175-19248293 E EGN_Mt090430 20090702
Length = 433
Score = 83.2 bits (204), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 56/77 (72%), Gaps = 8/77 (10%)
Query: 12 SATDPKAVITTYEGKHNHDLPAAKGSIHSTVNSNSAELKQQDMEKQDNRRDLGS------ 65
++TDPKAVITTYEGKHNHD+PAAK + H+ N+N+++LK Q+ + + GS
Sbjct: 359 ASTDPKAVITTYEGKHNHDVPAAKTNSHTIANNNASQLKSQNTISE--KTSFGSIGIGEG 416
Query: 66 NNQQPIARLRLKEGQIT 82
N QQP+ARLRLKE QIT
Sbjct: 417 NEQQPVARLRLKEEQIT 433
>IMGA|Medtr7g011100.1 DNA-binding WRKY chr07_pseudomolecule_IMGAG_V3
2591489-2584423 E EGN_Mt090430 20090702
Length = 529
Score = 70.9 bits (172), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 53/72 (73%), Gaps = 3/72 (4%)
Query: 12 SATDPKAVITTYEGKHNHDLPAAKGSIHSTVNSNSAELKQQDMEKQDNRRDL--GSNNQQ 69
++TDPKAVITTYEGKHNHD+PAA+ S H+T +S ++ + EK +D+ G+N+Q+
Sbjct: 457 ASTDPKAVITTYEGKHNHDVPAARNSSHNTASSMPSKPQALVPEKHPLLKDMEFGNNDQR 516
Query: 70 PIARLRLKEGQI 81
P+ LRLKE QI
Sbjct: 517 PV-HLRLKEEQI 527
>IMGA|Medtr4g115970.1 hypothetical protein
chr04_pseudomolecule_IMGAG_V3 27001439-27004710 F
EGN_Mt090430 20090702
Length = 388
Score = 65.1 bits (157), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 52/73 (71%), Gaps = 6/73 (8%)
Query: 13 ATDPKAVITTYEGKHNHDLPAAKGSIHSTVNSNSA-ELKQQDM--EKQD-NRRDLGSNNQ 68
+TDPKAV+TTYEGKHNHD+PAAK + H+ ++NSA +LK Q+ E Q+ NRR G +
Sbjct: 318 STDPKAVLTTYEGKHNHDVPAAKTNSHNLASNNSASQLKSQNAIPEMQNFNRR--GQHQP 375
Query: 69 QPIARLRLKEGQI 81
+A LRLKE I
Sbjct: 376 SAVAHLRLKEEHI 388
>IMGA|Medtr7g076980.1 DNA-binding WRKY chr07_pseudomolecule_IMGAG_V3
15923126-15920214 E EGN_Mt090430 20090702
Length = 480
Score = 52.0 bits (123), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 28/35 (80%)
Query: 12 SATDPKAVITTYEGKHNHDLPAAKGSIHSTVNSNS 46
+A D KAVITTYEGKHNHD+PAA+GS +N NS
Sbjct: 348 AAHDIKAVITTYEGKHNHDVPAARGSAGYNLNRNS 382
>IMGA|Medtr7g076990.1 DNA-binding WRKY chr07_pseudomolecule_IMGAG_V3
15923457-15920214 F EGN_Mt090430 20090702
Length = 409
Score = 52.0 bits (123), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 28/35 (80%)
Query: 12 SATDPKAVITTYEGKHNHDLPAAKGSIHSTVNSNS 46
+A D KAVITTYEGKHNHD+PAA+GS +N NS
Sbjct: 277 AAHDIKAVITTYEGKHNHDVPAARGSAGYNLNRNS 311
>IMGA|Medtr7g076990.2 DNA-binding WRKY chr07_pseudomolecule_IMGAG_V3
15923457-15920214 F EGN_Mt090430 20090702
Length = 205
Score = 51.6 bits (122), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 10 KESATDPKAVITTYEGKHNHDLPAAKGSIHSTVNSNS 46
+ +A D KAVITTYEGKHNHD+PAA+GS +N NS
Sbjct: 71 ERAAHDIKAVITTYEGKHNHDVPAARGSAGYNLNRNS 107
>IMGA|Medtr5g101900.1 DNA-binding WRKY chr05_pseudomolecule_IMGAG_V3
40809480-40813913 E EGN_Mt090430 20090702
Length = 545
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/25 (84%), Positives = 23/25 (92%)
Query: 15 DPKAVITTYEGKHNHDLPAAKGSIH 39
DPKAVITTYEGKHNHD+PAA+ S H
Sbjct: 406 DPKAVITTYEGKHNHDVPAARSSSH 430
>IMGA|Medtr3g077040.1 DNA-binding WRKY chr03_pseudomolecule_IMGAG_V3
18050053-18056742 E EGN_Mt090430 20090702
Length = 595
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 15 DPKAVITTYEGKHNHDLPAAKGSIHSTVNSNSA 47
DPKAVITTYEGKHNHD+P A+ + H ++A
Sbjct: 457 DPKAVITTYEGKHNHDVPTARHNSHDMAGPSAA 489
>IMGA|Medtr3g077040.2 DNA-binding WRKY chr03_pseudomolecule_IMGAG_V3
18052472-18056742 E EGN_Mt090430 20090702
Length = 400
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 15 DPKAVITTYEGKHNHDLPAAKGSIHSTVNSNSA 47
DPKAVITTYEGKHNHD+P A+ + H ++A
Sbjct: 262 DPKAVITTYEGKHNHDVPTARHNSHDMAGPSAA 294
>IMGA|Medtr5g082420.1 DNA-binding WRKY chr05_pseudomolecule_IMGAG_V3
31019076-31015317 E EGN_Mt090430 20090702
Length = 581
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/23 (82%), Positives = 22/23 (95%)
Query: 15 DPKAVITTYEGKHNHDLPAAKGS 37
D +AVITTYEGKHNHD+PAA+GS
Sbjct: 462 DLRAVITTYEGKHNHDVPAARGS 484