Jatropha Genome Database

JcCB0018211.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0018211.10 + phase: 0 /partial
         (374 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g123800.1 Glycosyl transferase, group 1; N-6 Adenine-...   445   e-125
IMGA|Medtr6g012910.1 Glycosyl transferase, group 1 chr06_pseudom...   179   2e-45

>IMGA|Medtr3g123800.1 Glycosyl transferase, group 1; N-6
           Adenine-specific DNA methylase
           chr03_pseudomolecule_IMGAG_V3 31238660-31231370 E
           EGN_Mt090430 20090702
          Length = 663

 Score =  445 bits (1144), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 217/309 (70%), Positives = 243/309 (78%), Gaps = 16/309 (5%)

Query: 81  VLGAETDESGSVIGFNLISQSGA-------------EEIESHEDVAVDTAE--EIVDAEG 125
           +L  E D+ GS++ F L   S +             +  E+  ++  D  E  EI +AE 
Sbjct: 81  LLSREIDDFGSLVSFRLTPHSASASASDFMGALHAGKTAETQGNLRSDEVEKPEIGNAED 140

Query: 126 REKAQTRVKHSIVFVTAEAAPYSKTGGLGDVCGSLPIALASRGHRVMVVSPRYLHGSPQD 185
            EKAQT V  +IVFVT+EAAPYSKTGGL DVCGSLPIALA RGHRVMV+SPRY+HG+  D
Sbjct: 141 -EKAQTIVTRNIVFVTSEAAPYSKTGGLADVCGSLPIALAGRGHRVMVISPRYIHGTAAD 199

Query: 186 KNLVNAVDLNCRVKVYCFGGAQEVSFFHEYREGVDWVFVDHPSYHRPGNPYGDGRGAFGD 245
                AVDL   + V+CFGGAQEV FFHEYREGVDWVFVDHPS+HRPGNPYGD  G F D
Sbjct: 200 SKFSGAVDLGSPINVFCFGGAQEVGFFHEYREGVDWVFVDHPSFHRPGNPYGDKHGTFKD 259

Query: 246 NQFRFTVLCHAACEAPLVLPLGGYTYGEKCLFLANDWHASLVPVLLAAKYHPFGVYKDAR 305
           NQFRFT+L HAACEAPLVLPLGG+TYGEKCLFL NDWHASLV VLLA+KY P+GVYKDAR
Sbjct: 260 NQFRFTLLSHAACEAPLVLPLGGFTYGEKCLFLVNDWHASLVSVLLASKYRPYGVYKDAR 319

Query: 306 SVLVIHNLAHQGVEPAVTYKNFGLPPEWYGALEWVFPTWARTHALDTGEAVNILKGAIVT 365
           S+LVIHN+AHQGVEPA+TY N GLP EWYGAL WVFPTWARTHALDTGEAVN LKGAIVT
Sbjct: 320 SILVIHNIAHQGVEPAITYSNLGLPQEWYGALGWVFPTWARTHALDTGEAVNFLKGAIVT 379

Query: 366 ADRILTVSK 374
           ADRI+TVSK
Sbjct: 380 ADRIVTVSK 388


>IMGA|Medtr6g012910.1 Glycosyl transferase, group 1
           chr06_pseudomolecule_IMGAG_V3 2547326-2554167 E
           EGN_Mt090430 20090702
          Length = 758

 Score =  179 bits (453), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 106/240 (44%), Positives = 131/240 (54%), Gaps = 20/240 (8%)

Query: 136 SIVFVTAEAAPYSKTGGLGDVCGSLPIALASRGHRVMVVSPRYLHGSPQDKNLVNAVDLN 195
           +I+ V AE AP+SKTGGLGDV G+LP ALA RGHRVMVV+P Y        N   A D+ 
Sbjct: 268 NIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVAPHY-------GNYAEAQDIG 320

Query: 196 CRVKVYCFGGAQEVSFFHEYREGVDWVFVDHPSY-HRPGNPYGDGRGAFGDNQFRFTVLC 254
            R +    G   EV++F  Y +GVD+VF+D P + H   N YG  R    D   R  + C
Sbjct: 321 VRKRYKVAGQDMEVTYFQTYIDGVDFVFIDSPIFQHLESNIYGGNR---VDILRRMALFC 377

Query: 255 HAACEAPLVLPLGGYTYGEKCL-FLANDWHASLVPVLLAAKYHPFGVYKDARSVLVIHNL 313
            AA E P  +P GG  YG+  L F+ANDWH +L+PV L A Y   G+    RSVLVIHN+
Sbjct: 378 KAAVEVPWHVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDHGLMNYTRSVLVIHNI 437

Query: 314 AHQGVEPAVTYKNFGLPPEWYGALEWVFPTWARTHALDTGEAVNILKGAIVTADRILTVS 373
           AHQG  P   +    LP  +        P          GE  NI    + TADRI+TVS
Sbjct: 438 AHQGRGPLDDFNIVDLPGNYIDLFRMYDPV--------GGEHFNIFAAGLKTADRIVTVS 489