Jatropha Genome Database

JcCB0017941.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0017941.30 + phase: 0 
         (388 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g062150.1 hypothetical protein chr07_pseudomolecule_I...   114   1e-25
IMGA|Medtr7g062140.1 hypothetical protein chr07_pseudomolecule_I...    99   3e-21

>IMGA|Medtr7g062150.1 hypothetical protein
           chr07_pseudomolecule_IMGAG_V3 12673294-12668003 E
           EGN_Mt090430 20090702
          Length = 487

 Score =  114 bits (284), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 29/315 (9%)

Query: 70  LNELRYKLQIYRSGDYWVPTGGLKKEEMDIPPIVTILLVGFSSSGKSSLVNLMYSVLGRT 129
           L + + K+  YR G +     GLK  + D+P   +++LVG S SGKSSL+N +  V    
Sbjct: 92  LKQAKEKILRYRPGTWIEKARGLKLRDYDVPETTSLILVGPSGSGKSSLINRISKVFDDD 151

Query: 130 GLVLFAQTKSGSGKKNYTTMFMEEHNVLRSIKSGFCVYDSRGFNYDKVGEALEELSSWMS 189
                    S +  +   T F+ EH + R   S  C+YD+R  + +K  E  E L +WM+
Sbjct: 152 KFAPTRAQVSYNSLRGDGTYFLREHMIPRDSNS-ICLYDTRSLS-NKSHENNEMLKNWMT 209

Query: 190 DGVHHNQLCLRSGDHNVLLKDIDAEQLSSRNSSKFI----QRRVNCAMVVVNVAEVYKAL 245
           +GVHH +L +RS D+  L      E L  + + K       R+VN  + V+N   V   +
Sbjct: 210 EGVHHGELVIRSKDNQTL-----TESLKCKGNKKGFFSSKSRKVNFVIYVLNGLSVLNMM 264

Query: 246 KAGDSK-PLEATKELFCSSALRNC-----NENPILILTHGDLLTSEERIEGRLKICESLG 299
           +  D        +E+  +    N      ++ P+L+LTHGDLL+  +R   R+ + E LG
Sbjct: 265 ENADGAFKARYIEEIVSTFNFNNPFLSFKDDKPVLVLTHGDLLSLSDRARVRVYLGEVLG 324

Query: 300 ISETNGIYDVVCLTEYGFLAEESDPVSAYNVAEAVYRALLISDREHLPKKT--LQDWTLF 357
           I  T  I+D+           E D +   +    + R  L     ++P+KT  +      
Sbjct: 325 IPPTKQIFDI----------PECDDLVTESAIIGMLRYTLEHADNNIPQKTNVMNKVHKI 374

Query: 358 ILSWLMSLMAIFFAF 372
            LS  M LM +   F
Sbjct: 375 SLSLFMILMMLAIGF 389


>IMGA|Medtr7g062140.1 hypothetical protein
           chr07_pseudomolecule_IMGAG_V3 12666199-12658678 E
           EGN_Mt090430 20090702
          Length = 484

 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 120/257 (46%), Gaps = 23/257 (8%)

Query: 65  IAHEGLNELRYKLQIYRSGDYWVPTGGLKKEEMDIPPIVTILLVGFSSSGKSSLVNLMYS 124
           I  + L E + K+  YR G +     GLK  + D+P    +LLVG S SGKSSL+N +  
Sbjct: 93  IDSKNLKEAKEKILSYRPGTWTEKAKGLKLCDYDVPETTCLLLVGPSGSGKSSLINRISK 152

Query: 125 VLGRTGLVLFAQTKSGSGKKNYTTMFMEEHNVLRSIKSGFCVYDSRGFNYDKVGEALEEL 184
           V             S +  +   T F+ E+ + R   S  C+YD+R  + D   E  + L
Sbjct: 153 VFDEDKFAPARAQVSYNSIRGNGTCFLREYMIPRDSNS-ICLYDTRSLS-DDSHENNKML 210

Query: 185 SSWMSDGVHHNQLCLRSGDHNVLLKDI----DAEQLSSRNSSKFIQRRVNCAMVVVNVAE 240
            +WM+ GV H +L  R  D   L K++    D +   S  S     R+VN  + V+N   
Sbjct: 211 KNWMTKGVRHGELVARGMDDKRLSKNLKLKGDKKGFFSSKS-----RKVNYVICVLNGLS 265

Query: 241 VYKALKAGDSKPLEATKELFCSSALR--NC------NENPILILTHGDLLTSEERIEGRL 292
           V   ++        A +E +    +   NC      ++ P+L+LTHGDLL+  +R   R 
Sbjct: 266 VLNVIENAGG----ALEEWYIQQIVSTFNCPFLSFKDDKPVLVLTHGDLLSLSDRARVRA 321

Query: 293 KICESLGISETNGIYDV 309
            + E LGI  T  I+D+
Sbjct: 322 YLGELLGIPPTKQIFDI 338