Jatropha Genome Database

JcCB0017171.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0017171.20 + phase: 2 /pseudo/partial
         (184 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g133160.1 Cyclic nucleotide-binding; Ion transport pr...   221   1e-58
IMGA|Medtr8g145290.1 IQ calmodulin-binding region; Cyclic nucleo...   140   3e-34
IMGA|Medtr1g076850.1 Cyclic nucleotide-binding; Ion transport pr...   140   4e-34
IMGA|Medtr3g124400.1 Cyclic nucleotide-gated ion channel 1, puta...   139   7e-34
IMGA|Medtr4g021850.1 IQ calmodulin-binding region; Cyclic nucleo...   120   3e-28
IMGA|AC233683_6.1 Cyclic nucleotide-binding; Ion transport prote...   119   8e-28
IMGA|Medtr6g074020.1 Cyclic nucleotide-binding; Ion transport pr...   109   8e-25
IMGA|Medtr5g007700.1 Cyclic nucleotide-binding; Ion transport pr...   103   3e-23
IMGA|Medtr6g074230.1 Putative cyclic nucleotide-gated ion channe...    95   2e-20
IMGA|Medtr7g011470.1 Cyclic nucleotide-binding; Ion transport pr...    83   9e-17
IMGA|Medtr7g011720.1 Cyclic nucleotide-binding; Ion transport pr...    83   9e-17
IMGA|Medtr6g074320.1 Putative cyclic nucleotide-gated ion channe...    81   3e-16
IMGA|Medtr2g095430.1 Cyclic nucleotide-binding chr02_pseudomolec...    65   2e-11
IMGA|Medtr6g074200.1 Putative cyclic nucleotide-gated ion channe...    59   2e-09
IMGA|Medtr6g074210.1 hypothetical protein chr06_pseudomolecule_I...    49   1e-06

>IMGA|Medtr3g133160.1 Cyclic nucleotide-binding; Ion transport
           protein chr03_pseudomolecule_IMGAG_V3 33670090-33666246
           H EGN_Mt090430 20090702
          Length = 726

 Score =  221 bits (564), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 112/179 (62%), Positives = 136/179 (75%), Gaps = 11/179 (6%)

Query: 5   HQTGKPFSVYKIPKT---EGGVSD----PKTGYKI--PKFGRFKLFPENHESRRKRILDP 55
           H   KP SVYKI K    EG +S      K G  I  P F +FK+F ENHE  +KRILDP
Sbjct: 17  HNLEKPMSVYKIQKILNPEGKISSIVDTDKNGMNIKFPTFEKFKVFQENHEPWKKRILDP 76

Query: 56  GSDVFLQWNRVFLFSCLVALFVDPLFFYLPTVI--RHGATSCMHVDLNLGITVTCFRTFA 113
           GSD+FL+W R FL SC+++LFVDPLFFYLP+V    +  +SCM  DLNLGI VTCFRTFA
Sbjct: 77  GSDIFLEWKRAFLCSCILSLFVDPLFFYLPSVAISTNKNSSCMVTDLNLGIVVTCFRTFA 136

Query: 114 DIIYILHIVVKFRTAYVAPSSRVFGRGELVMDLDKIARRYLKSDFFIDLIAALPLPQVL 172
           D+ Y+L++V+KFRTA+V+PSSRVFGRGELVMD   IARRYL+S+FF+DL AALPLPQ++
Sbjct: 137 DVFYLLNMVIKFRTAFVSPSSRVFGRGELVMDPRLIARRYLRSEFFLDLFAALPLPQIV 195


>IMGA|Medtr8g145290.1 IQ calmodulin-binding region; Cyclic
           nucleotide-binding; Ion transport protein
           chr08_pseudomolecule_IMGAG_V3 35288306-35294670 E
           EGN_Mt090430 20090702
          Length = 731

 Score =  140 bits (354), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 64/133 (48%), Positives = 94/133 (70%), Gaps = 2/133 (1%)

Query: 40  LFPENHESRRKRILDPGSDVFLQWNRVFLFSCLVALFVDPLFFYLPTVIRHGATSCMHVD 99
           +FPE+ +   K+I DP     L WN++F+ SC+ ++FVDPLFFYLP +  +    C+ +D
Sbjct: 87  VFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCIFSVFVDPLFFYLPVI--NDQLHCLGID 144

Query: 100 LNLGITVTCFRTFADIIYILHIVVKFRTAYVAPSSRVFGRGELVMDLDKIARRYLKSDFF 159
             L I VT  RT  D  Y+L++ ++FRTAY+APSSRVFGRGELV+D  +IA+RYL+  F 
Sbjct: 145 RKLAIIVTTLRTVIDAFYLLNMALQFRTAYIAPSSRVFGRGELVIDSAQIAKRYLRRYFI 204

Query: 160 IDLIAALPLPQVL 172
           +D ++ LP+PQ++
Sbjct: 205 VDFLSVLPVPQIV 217


>IMGA|Medtr1g076850.1 Cyclic nucleotide-binding; Ion transport
           protein chr01_pseudomolecule_IMGAG_V3 15468622-15472693
           E EGN_Mt090430 20090702
          Length = 710

 Score =  140 bits (353), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 65/137 (47%), Positives = 95/137 (69%), Gaps = 3/137 (2%)

Query: 36  GRFKLFPENHESRRKRILDPGSDVFLQWNRVFLFSCLVALFVDPLFFYLPTVIRHGATSC 95
           G  ++F E++++    + DP       WN++FL +CL++LFVDPLFFYLP   +     C
Sbjct: 55  GLSRVFSEDYDAGEILVFDPRGPRINLWNKIFLAACLISLFVDPLFFYLPVAKKE---KC 111

Query: 96  MHVDLNLGITVTCFRTFADIIYILHIVVKFRTAYVAPSSRVFGRGELVMDLDKIARRYLK 155
           + + + L +++T  RTF D  YI+HI ++F+TAY+APSSRV GRGEL++D  KIA  Y+K
Sbjct: 112 IDMSIGLEVSLTIIRTFVDAFYIIHIYIRFQTAYIAPSSRVSGRGELIIDSSKIASNYMK 171

Query: 156 SDFFIDLIAALPLPQVL 172
            + + DL+AALPLPQVL
Sbjct: 172 KELWSDLVAALPLPQVL 188


>IMGA|Medtr3g124400.1 Cyclic nucleotide-gated ion channel 1,
           putative chr03_pseudomolecule_IMGAG_V3 31530165-31527660
           E EGN_Mt090430 20090702
          Length = 303

 Score =  139 bits (350), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 66/128 (51%), Positives = 90/128 (70%), Gaps = 2/128 (1%)

Query: 47  SRRKRILDPGSDVFLQWNRVFLFSCLVALFVDPLFFYLPTVIRHGATSCMHVDLNLGITV 106
           S R +ILDP      +WN++F+ SCL+A+ +DPLFFY+P VI  G   C+  D  +  T 
Sbjct: 76  SSRNKILDPQGPFLQKWNKIFVLSCLIAVSIDPLFFYIP-VIDDGK-KCLSRDKKMETTA 133

Query: 107 TCFRTFADIIYILHIVVKFRTAYVAPSSRVFGRGELVMDLDKIARRYLKSDFFIDLIAAL 166
           T  R+F+DI YI+HI+ +FRT ++APSSRVFGRG LV D   IA+RY+ S F +D++A L
Sbjct: 134 TVLRSFSDIFYIIHIIFQFRTGFIAPSSRVFGRGVLVQDAWAIAKRYMSSYFLVDILAVL 193

Query: 167 PLPQVLFL 174
           PLPQV+ L
Sbjct: 194 PLPQVVIL 201


>IMGA|Medtr4g021850.1 IQ calmodulin-binding region; Cyclic
           nucleotide-binding; Ion transport protein
           chr04_pseudomolecule_IMGAG_V3 4278014-4281459 H
           EGN_Mt090430 20090702
          Length = 744

 Score =  120 bits (302), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 59/135 (43%), Positives = 86/135 (63%), Gaps = 2/135 (1%)

Query: 38  FKLFPENHESRRKRILDPGSDVFLQWNRVFLFSCLVALFVDPLFFYLPTVIRHGATSCMH 97
           + +FPE+ +  +K++ DP     L WN+ F   C++++  DP FFYLP    +  + C+ 
Sbjct: 87  WGVFPEDLKVSQKKVFDPQDKNLLYWNKFFEILCILSVACDPFFFYLPYF--NHKSYCLA 144

Query: 98  VDLNLGITVTCFRTFADIIYILHIVVKFRTAYVAPSSRVFGRGELVMDLDKIARRYLKSD 157
           +D NL       RT  D IY++ I  +FRTA++APSSRVFGRGELV+D   IA+RYL+  
Sbjct: 145 IDNNLAKFTVILRTICDFIYLIRISFQFRTAFIAPSSRVFGRGELVIDPGLIAKRYLQRY 204

Query: 158 FFIDLIAALPLPQVL 172
           F ID  + LPLPQ++
Sbjct: 205 FIIDFWSVLPLPQMV 219


>IMGA|AC233683_6.1 Cyclic nucleotide-binding; Ion transport protein
           AC233683.2 39853-37118 E EGN_Mt090430 20090702
          Length = 603

 Score =  119 bits (298), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 57/116 (49%), Positives = 81/116 (69%), Gaps = 5/116 (4%)

Query: 39  KLFPENHE--SRRKRILDPGSDVFLQWNRVFLFSCLVALFVDPLFFYLPTVIRHGATSCM 96
           ++F E+++   RR+RI DP      QWN++FL +CL++LFVDPLFFYLP V       C+
Sbjct: 44  RVFSEDYKRVKRRRRIFDPRGQTIHQWNKIFLVACLISLFVDPLFFYLPIV---QDEVCI 100

Query: 97  HVDLNLGITVTCFRTFADIIYILHIVVKFRTAYVAPSSRVFGRGELVMDLDKIARR 152
            + + + + +   R+ AD+ Y++HI ++F TAYVAPSSRVFGRGELV+D  KIA R
Sbjct: 101 DIGIAVEVFLIIIRSIADVFYVIHIFMRFHTAYVAPSSRVFGRGELVIDSSKIASR 156


>IMGA|Medtr6g074020.1 Cyclic nucleotide-binding; Ion transport
           protein chr06_pseudomolecule_IMGAG_V3 14314764-14308804
           E EGN_Mt090430 20090702
          Length = 762

 Score =  109 bits (272), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 53/123 (43%), Positives = 77/123 (62%), Gaps = 2/123 (1%)

Query: 52  ILDPGSDVFLQWNRVFLFSCLVALFVDPLFFYLPTVIRHGATSCMHVDLNLGITVTCFRT 111
           +++P + V  QWN+V    CLVA+FVDPLFF+L  V       C+ ++  +  T+   R+
Sbjct: 184 VMNPHAKVVQQWNKVLAIFCLVAIFVDPLFFFLLYV--EEKNKCIRINHAMATTLVVLRS 241

Query: 112 FADIIYILHIVVKFRTAYVAPSSRVFGRGELVMDLDKIARRYLKSDFFIDLIAALPLPQV 171
             D++Y+L+I+++FR AYV+P SRV G G+LV    KIA  Y KS F  DL    PLPQ+
Sbjct: 242 ITDVVYLLNILLQFRLAYVSPESRVVGAGDLVDHPKKIAVNYFKSYFLFDLFVVSPLPQI 301

Query: 172 LFL 174
           + L
Sbjct: 302 MIL 304


>IMGA|Medtr5g007700.1 Cyclic nucleotide-binding; Ion transport
           protein chr05_pseudomolecule_IMGAG_V3 1260759-1266340 E
           EGN_Mt090430 20090702
          Length = 742

 Score =  103 bits (258), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 77/123 (62%), Gaps = 5/123 (4%)

Query: 52  ILDPGSDVFLQWNRVFLFSCLVALFVDPLFFYLPTVIRHGATSCMHVDLNLGITVTCFRT 111
           +++P + +  QWN+     CL+A+FVDPLFF+L          C+ ++  +  T+   R+
Sbjct: 172 VMNPHTKIVQQWNKFLAIFCLLAIFVDPLFFFLLY-----DNKCIQINWTMATTLVLLRS 226

Query: 112 FADIIYILHIVVKFRTAYVAPSSRVFGRGELVMDLDKIARRYLKSDFFIDLIAALPLPQV 171
             D++Y+L+I+++FR AYV+P SRV G G+LV    KIA  Y KS FF+DL    P+PQ+
Sbjct: 227 IFDVVYLLNILLQFRLAYVSPESRVVGAGDLVDHPKKIAVNYFKSYFFLDLFVVSPIPQI 286

Query: 172 LFL 174
           + +
Sbjct: 287 MIM 289


>IMGA|Medtr6g074230.1 Putative cyclic nucleotide-gated ion channel
           19, chr06_pseudomolecule_IMGAG_V3 14411849-14414388 E
           EGN_Mt090430 20090702
          Length = 193

 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 80/139 (57%), Gaps = 4/139 (2%)

Query: 35  FGRFKLFPENHESRRKRILDPGSDVFLQWNRVFLFSCLVALFVDPLFFYLPTVIRHGATS 94
           FGR KLF  +  S   ++++P   V   WN+     C VA+FVDPLF +  +   +    
Sbjct: 43  FGR-KLF-SSCSSCIPKVMNPDCKVVHLWNKFLAIICFVAIFVDPLFLF--SFYVNKDDK 98

Query: 95  CMHVDLNLGITVTCFRTFADIIYILHIVVKFRTAYVAPSSRVFGRGELVMDLDKIARRYL 154
           C+  +    I +  +++  D +Y+L+I+++FR AY++P SR  G G+L+     IA  YL
Sbjct: 99  CLVTNWKTAIKLLIYKSLIDFLYLLNILIQFRVAYISPRSRGVGAGDLIDHPKMIALNYL 158

Query: 155 KSDFFIDLIAALPLPQVLF 173
           K+DF ID   ALPLPQV F
Sbjct: 159 KNDFLIDFFIALPLPQVHF 177


>IMGA|Medtr7g011470.1 Cyclic nucleotide-binding; Ion transport
           protein chr07_pseudomolecule_IMGAG_V3 2799981-2793432 E
           EGN_Mt090430 20090702
          Length = 710

 Score = 82.8 bits (203), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 51/125 (40%), Positives = 75/125 (60%), Gaps = 3/125 (2%)

Query: 51  RILDPGSDVFLQWNRVFLFSCLVALFVDPLFFYLPTVIRHGATSCMHVDLNLGITVTCFR 110
           ++LDP S      NR  L +  VAL +DPLFFY  ++ R G + C+++D  L   VT  R
Sbjct: 108 KVLDPRSKRVQLSNRALLLARGVALAIDPLFFYALSIGREG-SPCLYMDGGLAAVVTVAR 166

Query: 111 TFADIIYILHIVVKFRTAYVAPSSRVFGRGELVMDLDKIARRYLKS--DFFIDLIAALPL 168
           T  D +++ H+ ++FR AYV+  S V G G+LV D   IA  Y++S   F+ D+   LP+
Sbjct: 167 TVVDAVHLFHVWLQFRLAYVSRESLVVGCGKLVWDARAIASHYMRSFKGFWFDVFVILPV 226

Query: 169 PQVLF 173
           PQV+F
Sbjct: 227 PQVVF 231


>IMGA|Medtr7g011720.1 Cyclic nucleotide-binding; Ion transport
           protein chr07_pseudomolecule_IMGAG_V3 2908872-2902999 E
           EGN_Mt090430 20090702
          Length = 705

 Score = 82.8 bits (203), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 51/125 (40%), Positives = 75/125 (60%), Gaps = 3/125 (2%)

Query: 51  RILDPGSDVFLQWNRVFLFSCLVALFVDPLFFYLPTVIRHGATSCMHVDLNLGITVTCFR 110
           ++LDP S      NR  L +  VAL +DPLFFY  ++ R G + C+++D  L   VT  R
Sbjct: 103 KVLDPRSKRVQLSNRALLLARGVALAIDPLFFYALSIGREG-SPCLYMDGGLAAVVTVAR 161

Query: 111 TFADIIYILHIVVKFRTAYVAPSSRVFGRGELVMDLDKIARRYLKS--DFFIDLIAALPL 168
           T  D +++ H+ ++FR AYV+  S V G G+LV D   IA  Y++S   F+ D+   LP+
Sbjct: 162 TVVDAVHLFHVWLQFRLAYVSRESLVVGCGKLVWDARAIASHYMRSFKGFWFDVFVILPV 221

Query: 169 PQVLF 173
           PQV+F
Sbjct: 222 PQVVF 226


>IMGA|Medtr6g074320.1 Putative cyclic nucleotide-gated ion channel
           19, chr06_pseudomolecule_IMGAG_V3 14441688-14440637 H
           EGN_Mt090430 20090702
          Length = 198

 Score = 80.9 bits (198), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 64/109 (58%), Gaps = 2/109 (1%)

Query: 51  RILDPGSDVFLQWNRVFLFSCLVALFVDPLFFYLPTVIRHGATSCMHVDLNLGITVTCFR 110
           R+++P   V  QWN +F  SC VA+F DPLFF+L  V +     C+ ++  +   ++  R
Sbjct: 71  RVMNPHCKVVQQWNTIFAISCSVAIFFDPLFFFLYYVNKDD--KCIVINWTMATLLSLLR 128

Query: 111 TFADIIYILHIVVKFRTAYVAPSSRVFGRGELVMDLDKIARRYLKSDFF 159
           +  D++Y L+I+++FR AY+ P  +  G  +LV    +IA  YLK  F+
Sbjct: 129 SIMDVLYFLNILLQFRLAYINPEYKGIGAADLVDHPTRIAHNYLKGTFY 177


>IMGA|Medtr2g095430.1 Cyclic nucleotide-binding
           chr02_pseudomolecule_IMGAG_V3 21806469-21810580 H
           EGN_Mt090430 20090702
          Length = 669

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 14/131 (10%)

Query: 47  SRRKRILDPGSDVFLQWNRVFLFSCLVALFVDPLFFYLPTVIRHGATSCMHVDLNLGITV 106
           S  K +LDP      +WNRVFL  C + LFVDPLFFY  ++       C+ +D    +TV
Sbjct: 58  SLSKVLLDPRGKWAEEWNRVFLLVCAMGLFVDPLFFYAISI--SDTCMCLFIDGWFLVTV 115

Query: 107 TCFRTFADIIYILHIVVKFRTAYVAPSSR-VFG---RGELVMDLDKIARRYLKSDFFIDL 162
           T  R   D++++ +I ++F   Y+    R  FG    G L  +  K+ +      FF ++
Sbjct: 116 TVIRCMTDMLHLWNIWLQF---YIHKHKRSSFGFIHHGTLSSNSFKVNK-----AFFFNI 167

Query: 163 IAALPLPQVLF 173
              LPLPQ++ 
Sbjct: 168 FILLPLPQIVL 178


>IMGA|Medtr6g074200.1 Putative cyclic nucleotide-gated ion channel
           19, chr06_pseudomolecule_IMGAG_V3 14396500-14397690 E
           EGN_Mt090430 20090702
          Length = 249

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 2/78 (2%)

Query: 52  ILDPGSDVFLQWNRVFLFSCLVALFVDPLFFYLPTVIRHGATSCMHVDLNLGITVTCFRT 111
           +++P + V  QWN+     C+VA++VDPLFF+L  V +     C+ +D+ +  T+   R+
Sbjct: 169 VMNPHAKVVQQWNKFLAIFCIVAIYVDPLFFFLFYVNKDN--KCIRIDMPMATTLVVLRS 226

Query: 112 FADIIYILHIVVKFRTAY 129
             D++Y+L+I+ +    Y
Sbjct: 227 ITDVVYLLNILFQVICQY 244


>IMGA|Medtr6g074210.1 hypothetical protein
           chr06_pseudomolecule_IMGAG_V3 14398335-14400503 E
           EGN_Mt090430 20090702
          Length = 63

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 28/46 (60%)

Query: 125 FRTAYVAPSSRVFGRGELVMDLDKIARRYLKSDFFIDLIAALPLPQ 170
           FR AYV+P SR  G G+LV    KIA  Y KS  F D+   LPLPQ
Sbjct: 2   FRLAYVSPESRGAGAGDLVYHPKKIAANYFKSYLFFDVFVVLPLPQ 47