Jatropha Genome Database

JcCB0016381.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0016381.30 + phase: 0 
         (94 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g121670.1 Glycosyl transferase, group 1; Sucrose-6F-p...   165   6e-42
IMGA|Medtr5g098550.1 Glycosyl transferase, group 1; Sucrose-6F-p...   119   4e-28
IMGA|Medtr3g061640.1 Sucrose-phosphate synthase 2, putative chr0...   115   7e-27

>IMGA|Medtr8g121670.1 Glycosyl transferase, group 1;
          Sucrose-6F-phosphate phosphohydrolase, plant and
          cyanobacteria chr08_pseudomolecule_IMGAG_V3
          28260003-28253277 E EGN_Mt090430 20090702
          Length = 1058

 Score =  165 bits (417), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 77/92 (83%), Positives = 87/92 (94%), Gaps = 1/92 (1%)

Query: 1  MAGNDWINSYLDAILDVDPGIDNAKLSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWL 60
          MAGNDW+NSYL+AILDV PG+D+AK SLLLRERGRFSPTRYFVEEVI GFDETDL+RSW+
Sbjct: 1  MAGNDWLNSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVI-GFDETDLYRSWV 59

Query: 61 RAAAMRSTQERNTRLENMCWRIWNLARKKKQV 92
          RA++ RS QERNTRLENMCWRIWNLAR+KKQ+
Sbjct: 60 RASSSRSPQERNTRLENMCWRIWNLARQKKQL 91


>IMGA|Medtr5g098550.1 Glycosyl transferase, group 1;
          Sucrose-6F-phosphate phosphohydrolase, plant and
          cyanobacteria chr05_pseudomolecule_IMGAG_V3
          39304929-39310031 E EGN_Mt090430 20090702
          Length = 1058

 Score =  119 bits (297), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 55/98 (56%), Positives = 74/98 (75%), Gaps = 6/98 (6%)

Query: 1  MAGNDWINSYLDAILDVDPGI-----DNAKLSLLLRERG-RFSPTRYFVEEVITGFDETD 54
          MAGN+WIN YL+AIL    G      +  +++   RE G  F+PT+YFVEEV++  DE+D
Sbjct: 1  MAGNEWINGYLEAILSTGGGASTTVEEQQRVAAAARESGDHFNPTKYFVEEVVSAVDESD 60

Query: 55 LHRSWLRAAAMRSTQERNTRLENMCWRIWNLARKKKQV 92
          LHR+WL+  A R+T+ER++RLENMCWRIW+LARKKK+V
Sbjct: 61 LHRTWLKVVATRNTRERSSRLENMCWRIWHLARKKKKV 98


>IMGA|Medtr3g061640.1 Sucrose-phosphate synthase 2, putative
          chr03_pseudomolecule_IMGAG_V3 13924204-13925894 E
          EGN_Mt090430 20090702
          Length = 171

 Score =  115 bits (287), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 52/94 (55%), Positives = 70/94 (74%), Gaps = 2/94 (2%)

Query: 1  MAGNDWINSYLDAILDVDPGI--DNAKLSLLLRERGRFSPTRYFVEEVITGFDETDLHRS 58
          MAGN+WIN YL+AIL        +       LR+ G F+PT+YFVEEV+   DE+DL+R+
Sbjct: 1  MAGNEWINGYLEAILSTGASTIEEQKPPQAALRDGGHFNPTKYFVEEVVASVDESDLYRT 60

Query: 59 WLRAAAMRSTQERNTRLENMCWRIWNLARKKKQV 92
          W++  A R+T+ER++RLENMCWRIW+LARKKKQ+
Sbjct: 61 WVKVVATRNTRERSSRLENMCWRIWHLARKKKQL 94