Jatropha Genome Database
- JcCB0014741.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0014741.20 - phase: 0 /TE
(1098 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr2g104160.1 Retrotransposon gag protein; Polynucleotidy... 222 6e-58
IMGA|Medtr1g140330.1 Polynucleotidyl transferase, Ribonuclease H... 217 3e-56
IMGA|AC235009_2.1 Retrotransposon gag protein; Polynucleotidyl t... 214 2e-55
IMGA|Medtr8g044140.1 Retrotransposon gag protein; Polynucleotidy... 210 3e-54
IMGA|AC235005_1.1 Retrotransposon gag protein; Polynucleotidyl t... 200 3e-51
IMGA|Medtr4g062320.1 Retrotransposon gag protein; Polynucleotidy... 196 5e-50
IMGA|Medtr4g157510.1 Retrotransposon gag protein; Polynucleotidy... 190 3e-48
IMGA|Medtr5g103970.1 Polynucleotidyl transferase, Ribonuclease H... 181 3e-45
IMGA|Medtr2g038510.1 Polynucleotidyl transferase, Ribonuclease H... 176 7e-44
IMGA|Medtr5g072700.1 Retrotransposon gag protein; Polynucleotidy... 175 1e-43
IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H... 169 6e-42
IMGA|Medtr4g079130.1 Polynucleotidyl transferase, Ribonuclease H... 166 6e-41
IMGA|Medtr8g044860.1 Zinc finger, C2H2-type; Polynucleotidyl tra... 142 1e-33
IMGA|Medtr1g013560.1 Polynucleotidyl transferase, Ribonuclease H... 139 9e-33
IMGA|Medtr7g045790.1 Polynucleotidyl transferase, Ribonuclease H... 132 1e-30
IMGA|CU179634_24.1 Polynucleotidyl transferase, Ribonuclease H f... 112 1e-24
IMGA|Medtr4g080020.1 Polynucleotidyl transferase, Ribonuclease H... 109 6e-24
IMGA|Medtr3g058920.1 Polynucleotidyl transferase, Ribonuclease H... 93 9e-19
IMGA|CU571152_16.1 Polynucleotidyl transferase, Ribonuclease H f... 69 1e-11
IMGA|Medtr5g049200.1 retroelement pol polyprotein-like, related ... 63 6e-10
IMGA|Medtr8g128710.1 Polynucleotidyl transferase, Ribonuclease H... 62 1e-09
IMGA|Medtr7g123950.1 Retrotransposon gag protein chr07_pseudomol... 61 3e-09
IMGA|Medtr5g093020.1 Polynucleotidyl transferase, Ribonuclease H... 55 2e-07
IMGA|Medtr4g114890.1 gag-pol polyprotein, related chr04_pseudomo... 54 5e-07
IMGA|Medtr3g169320.1 Polynucleotidyl transferase, Ribonuclease H... 51 3e-06
>IMGA|Medtr2g104160.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr02_pseudomolecule_IMGAG_V3 24496395-24493968 H
EGN_Mt090430 20090702
Length = 790
Score = 222 bits (566), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 137/411 (33%), Positives = 208/411 (50%), Gaps = 19/411 (4%)
Query: 311 ANFSSTQANGDSPWLLDTAASHHITNDLRNLSLHAPYEGNDELQLTDGSGLSITRVGSGT 370
A+F S Q D W++DT A+HH DL + ++ E + + L +GS + +G
Sbjct: 387 ASFDSKQ--NDPGWIVDTGATHHTCYDLNWFTSYSKIETIN-VNLPNGSVIEACYIGQ-- 441
Query: 371 IPLSSKLCYLSNVLYVPKAKTNLISIPQFCDSNQVSVEFFSRFYLIKDQFTGEVLAKGLL 430
+ LS L + NVLY+PK NLIS+ + C +EF + +I+++ T +
Sbjct: 442 VKLSKDLS-IDNVLYLPKFAVNLISVSKLCREQNCKLEFEADICIIQEKNTLRKIGLAKE 500
Query: 431 DHAFYKLHPFWNLKSSGCH---HVRL------SSVSWHQRLGH-PHSRIFNFVLSKFSIL 480
H Y L K S + V L V WH RLGH H R+ ++K
Sbjct: 501 KHGLYYLETDERNKVSVSNISAQVELHQKHVPDGVLWHLRLGHLSHDRMI--CMNKMYSY 558
Query: 481 VSIVKERVCDPCRCNKSQRLPFGDFSLKSSRPLELIYSDLWGPAPITSIDGFRYYIIFVD 540
V + CD C+ + + LPF S + +L++ D+WGP TS+ G +Y++ +D
Sbjct: 559 VPVSPHTACDVCQMCRQKILPFPISSRNAKTAFDLVHFDIWGPFSTTSVHGHKYFLTILD 618
Query: 541 RYTKYIWLYPLKAKSEVYALFPIFQKLVENTFNSTIKIIYTDGGGEYVALKKYLQNFGIN 600
T+++W+ LK KSE F +VE F IK+I +D G E++ L+++ GI
Sbjct: 619 DCTRHVWIVMLKNKSEASYQVKNFVSMVERQFERKIKMIRSDNGPEFM-LREFYDKKGII 677
Query: 601 HLQTPPHTPQHNGAAERHHRHLVETGXXXXXXXXXXXXFWTFAFKTAAYLINRMPTPILN 660
H ++ +TPQ NG ER H+H++ FW++A A YLINR+PT ILN
Sbjct: 678 HQRSCVYTPQQNGRVERRHQHILNISRALMFQSKLPKNFWSYAVLHAVYLINRIPTKILN 737
Query: 661 YVSPYQKLFGQVPNYQSLRVFGCFCYPCLRPYMKSKFDTKSIPCVFLGYSS 711
S Y+ L+ +VP+ SL+VFGC Y P + KFD K+ C FLG+ S
Sbjct: 738 NKSSYEVLYNEVPDLSSLKVFGCLSYASTLPVNRYKFDPKARKCAFLGFKS 788
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Query: 28 KLTAMNYSTWRAQISPLLKGHNLMSYVLGTVQIPSAFITQEGKXVPNPDFEFWECXDQLI 87
+LT NY +W ++ L N +V G++ IP + + WE + L+
Sbjct: 35 QLTGENYHSWSMKMRRALAMKNKYKFVDGSIPIPDE---------DDLNRPAWERCNNLV 85
Query: 88 LATLRSSLSFSVMNVVADAETSAEVWKKLQVAYANKSATRILSLRDKLSRTKXGSRSISD 147
+ +S+S S+ + V E + ++W L+ + R+ L +++ K G I+D
Sbjct: 86 HTWIINSISPSIAHSVVFIEHAIDMWNDLKDRFMRGDRIRVAQLHQEIANLKQGDHKITD 145
Query: 148 YLTTVKQIAEEL 159
Y T ++ + EEL
Sbjct: 146 YFTELRGLWEEL 157
>IMGA|Medtr1g140330.1 Polynucleotidyl transferase, Ribonuclease H
fold chr01_pseudomolecule_IMGAG_V3 31006465-31009370 H
EGN_Mt090430 20090702
Length = 883
Score = 217 bits (552), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 156/541 (28%), Positives = 247/541 (45%), Gaps = 72/541 (13%)
Query: 259 SDGLSRNKLHSGGYQGSKTKVQCQFCERFGHTVRQCFK---------------------- 296
S G S+ + G S K C FC R GHT+ C++
Sbjct: 210 SAGKSQGRGRGNGNSNSNGKRSCSFCGRDGHTIDICYRKHEREDLDDSKSCKGNSNTEPS 269
Query: 297 ---SKNYFRNMLN--QSPQANFSSTQANGD----------------------SPWLLDTA 329
+K + ++ QS QA SS++ N W++D+
Sbjct: 270 FGITKEQYEQLVTLLQSQQA--SSSKVNLSHVTNHVTSGITRISYTMNHSSFGTWIVDSG 327
Query: 330 ASHHITNDLRNLSLHAPYEGNDELQLTDGSGLSITRVGSGTIPLSSKLCYLSNVLYVPKA 389
AS HI + ++N +AP ++L +G+ ++I + SGT+ S L NVLYV +
Sbjct: 328 ASDHICSSIKNFDSYAPIIP-VHIKLPNGN-MAIAKF-SGTVTFSPGLI-ARNVLYVAEF 383
Query: 390 KTNLISIPQFCDSNQVSVEFFSRFYLIKDQFTGEVLAKGLLDHAFYKLHPFWNLKSSGCH 449
K NL+S+P+ C N V F + I+D+ ++ G L Y L+ + S H
Sbjct: 384 KLNLLSVPKLCMDNNCIVTFDNDKCFIQDKSNLKMTGLGELIEGLYFLNLGSQVFSQFNH 443
Query: 450 HVRLSSVS-------------WHQRLGH-PHSRIFNFVLSKFSILVSIVKERVCDPCRCN 495
++S WH RLGH + R+ + + + + VCD C +
Sbjct: 444 QPVIASSQASSSTTFLPQEALWHFRLGHLSNDRLLR--MQQHFPCIKVDSNSVCDICHYS 501
Query: 496 KSQRLPFGDFSLKSSRPLELIYSDLWGPAPITSIDGFRYYIIFVDRYTKYIWLYPLKAKS 555
+ ++LPF K+S ELI+ D+WGP SI G +Y+I +D Y+++ W+ K KS
Sbjct: 502 RHKKLPFKLSMNKASHCYELIHFDIWGPISTHSIHGHKYFITALDDYSRFTWIMLCKTKS 561
Query: 556 EVYALFPIFQKLVENTFNSTIKIIYTDGGGEYVALKKYLQNFGINHLQTPPHTPQHNGAA 615
EV F +EN FN +K + TD G E++ + + + GI H + TPQ NG
Sbjct: 562 EVSKSVQNFILNIENQFNCKVKTVRTDNGPEFL-MPDFYSSKGIEHQTSCVETPQQNGRV 620
Query: 616 ERHHRHLVETGXXXXXXXXXXXXFWTFAFKTAAYLINRMPTPILNYVSPYQKLFGQVPNY 675
ER H+H++ FW+++ A Y+INR+PTP+L SPY +G P+
Sbjct: 621 ERKHQHILNVARALLFQSKLPKVFWSYSVLHAIYIINRIPTPLLQNKSPYFLRYGHDPDL 680
Query: 676 QSLRVFGCFCYPCLRPYMKSKFDTKSIPCVFLGYSSNKSAYVCYNLSQNKYIESRHVIFL 735
+ +VFGC Y ++KFD+++ CVFLGY + Y+L+ SR+V +
Sbjct: 681 NNFKVFGCLSYASTLHNHRTKFDSRAQKCVFLGYKQGIKGAILYDLNHKTIFASRNVTYH 740
Query: 736 E 736
E
Sbjct: 741 E 741
>IMGA|AC235009_2.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold AC235009.1 5302-2150 H
EGN_Mt090430 20090702
Length = 1051
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/453 (30%), Positives = 224/453 (49%), Gaps = 37/453 (8%)
Query: 315 STQANGDSPWLLDTAASHHITNDLRNLSLHAPYEGNDELQLTDGSGLSITRVGSGTIPLS 374
S N W++D+ A+ H+ + + + + +T +G SI +G + +
Sbjct: 342 SFHVNSIPSWIIDSGANDHVCFSKTHFT---SFYKIKPVLVTLPNGTSIYVHYAGNVHFT 398
Query: 375 SKLCYLSNVLYVPKAKTNLISIPQFCDSNQVSVEFFSRFYLIKDQFTGEVLAKGLLDHAF 434
L +L++VLY P+ K NLIS+ + CDS SV F S +I+D + ++ G
Sbjct: 399 PYL-HLTHVLYSPEFKVNLISVSKICDSLSCSVNFVSNKCVIQDVTSQRMIGLGDKSDGL 457
Query: 435 YKL---------------HPFWN-LKSSGC--------------HHVRL-SSVSWHQRLG 463
YKL P N + S C + R+ S WH RLG
Sbjct: 458 YKLSMHFVNQQLQLHNSFKPLPNKVAHSACNISTSSLSKSSTVFYSSRIPESALWHFRLG 517
Query: 464 HPHSRIFNFVLSKFSILVSIVKERVCDPCRCNKSQRLPFGDFSLKSSRPLELIYSDLWGP 523
H ++ + +S+ + + + CD C + ++LPF S ++ +L++ D+WGP
Sbjct: 518 HLSNQRLS-TMSRLYPSIIVDNKAACDICHFARHKKLPFPHSSSHANSKFQLLHFDIWGP 576
Query: 524 APITSIDGFRYYIIFVDRYTKYIWLYPLKAKSEVYALFPIFQKLVENTFNSTIKIIYTDG 583
I + G +Y++ VD +T+++W+ LK+K+EV F L+EN F+ T KII TD
Sbjct: 577 LAINYVHGHKYFLTIVDDHTRFLWIILLKSKAEVPIHIKNFIALIENQFHITPKIIRTDN 636
Query: 584 GGEYVALKKYLQNFGINHLQTPPHTPQHNGAAERHHRHLVETGXXXXXXXXXXXXFWTFA 643
G E++ L + + GI H ++ TPQ NG ER H+H++ G FW++A
Sbjct: 637 GSEFL-LHDFYASKGILHQRSCVETPQQNGRVERKHQHILNIGRALLYQSKLPLSFWSYA 695
Query: 644 FKTAAYLINRMPTPILNYVSPYQKLFGQVPNYQSLRVFGCFCYPCLRPYMKSKFDTKSIP 703
F A +LINR+PT +L SPYQ L+ P+ + +VFGC CY ++K +T++
Sbjct: 696 FLHAVFLINRVPTLVLQNQSPYQLLYDSSPDVTTFKVFGCLCYASSLQSHRTKLETRARK 755
Query: 704 CVFLGYSSNKSAYVCYNLSQNKYIESRHVIFLE 736
VFLGY S V Y+L + SRHV+F E
Sbjct: 756 SVFLGYKSGFKGSVLYDLHTREIFISRHVVFHE 788
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 45 LKGHNLMSYVLGTVQIPSAFITQEGKXVPNPDFEFWECXDQLILATLRSSLSFSVMNVVA 104
L N ++++ GT+Q P A WE + LI + + +S+S S+ +
Sbjct: 5 LGAKNKLAFINGTIQQPEALDLNRAA---------WERCNHLIHSWIINSVSDSIAQTIV 55
Query: 105 DAETSAEVWKKLQVAYANKSATRILSLRDKLSRTKXGSRSISDYLTTVKQIAEEL 159
+ +++VW+ L+ ++ RI +LR ++ K G +++S+Y T ++ + EEL
Sbjct: 56 FHDYASDVWEDLKERFSKADRIRISTLRSSINNLKQGGKTVSEYFTEMRSLWEEL 110
>IMGA|Medtr8g044140.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr08_pseudomolecule_IMGAG_V3 9732923-9735744 H
EGN_Mt090430 20090702
Length = 920
Score = 210 bits (535), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 135/427 (31%), Positives = 214/427 (50%), Gaps = 21/427 (4%)
Query: 324 WLLDTAASHHITNDLRNLSLHAPYEGNDELQLTDGSGLSITRVGSGTIPLSSKLCYLSNV 383
W++D+ AS HI + ++ +AP ++L +G+ ++I + SGT+ S L NV
Sbjct: 392 WIVDSGASDHICSSIKFFDSYAPIIP-VHIKLPNGN-MAIAKF-SGTVNFSPGLI-ARNV 447
Query: 384 LYVPKAKTNLISIPQFCDSNQVSVEFFSRFYLIKDQFTGEVLAKGLLDHAFYKLHPFWNL 443
LYV + K NL+S+P+ C N V F + I+D+ ++ G L Y L+ +
Sbjct: 448 LYVAEFKLNLLSVPKLCMDNNCIVTFDNDKCFIQDKSNLKMTGLGELIEGLYFLNLGSQV 507
Query: 444 KSSGCHH--VRLSSVS-----------WHQRLGH-PHSRIFNFVLSKFSILVSIVKERVC 489
S H + LS S WH RLGH + R+ + + + + VC
Sbjct: 508 FSQFNHQPVIALSQSSSSTTFLPQEALWHFRLGHLSNDRLLR--MQQHFPCIKVDSNSVC 565
Query: 490 DPCRCNKSQRLPFGDFSLKSSRPLELIYSDLWGPAPITSIDGFRYYIIFVDRYTKYIWLY 549
D C ++ ++LPF K+S ELI+ D+WGP SI G +Y+I +D Y+++ W+
Sbjct: 566 DICHYSRHKKLPFKLSMNKASHCYELIHFDIWGPISTHSIHGHKYFITALDDYSRFTWIM 625
Query: 550 PLKAKSEVYALFPIFQKLVENTFNSTIKIIYTDGGGEYVALKKYLQNFGINHLQTPPHTP 609
K KSEV F +EN FN +K + TD G E++ + + + GI H + TP
Sbjct: 626 LCKTKSEVSKSVQNFILNIENQFNCKVKTVRTDNGPEFL-MPDFYSSKGIEHQTSCVETP 684
Query: 610 QHNGAAERHHRHLVETGXXXXXXXXXXXXFWTFAFKTAAYLINRMPTPILNYVSPYQKLF 669
Q NG ER H+H++ FW+++ A Y+INR+PTP+L SPY +
Sbjct: 685 QQNGRVERKHQHILNVARALLFQSKLPKIFWSYSVLHAIYIINRIPTPLLQNKSPYFLRY 744
Query: 670 GQVPNYQSLRVFGCFCYPCLRPYMKSKFDTKSIPCVFLGYSSNKSAYVCYNLSQNKYIES 729
G P+ + +VFGC Y ++KFD+++ CVFLGY + Y+L+ S
Sbjct: 745 GHDPDLNNFKVFGCLSYASTLHNHRTKFDSRAQKCVFLGYKQGIKGAILYDLNHKTIFAS 804
Query: 730 RHVIFLE 736
R+V + E
Sbjct: 805 RNVTYHE 811
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 29 LTAMNYSTWRAQISPLLKGHNLMSYVLGTVQIPSAFITQEGKXVPNPDFEFWECXDQLIL 88
L+ NY +W + L N +V G++ +P+ F +P+F+ W + L+
Sbjct: 47 LSHSNYHSWARSMRRALGAKNKFDFVDGSIPVPTDF---------DPNFKAWNRCNMLVH 97
Query: 89 ATLRSSLSFSVMNVVADAETSAEVWKKLQVAYANKSATRILSLRDKLSRTKXGSRSISDY 148
+ + +S+ S+ + E + +VW +L+ ++ RI L+ ++ K SRS++++
Sbjct: 98 SWIMNSVEDSIAQSIVFLENAIDVWNELKERFSQGDFIRISELQCEIFSLKQDSRSVTEF 157
Query: 149 LTTVKQIAEEL 159
T +K + EEL
Sbjct: 158 FTALKVLWEEL 168
>IMGA|AC235005_1.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold AC235005.1 3152-790 H
EGN_Mt090430 20090702
Length = 772
Score = 200 bits (509), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/428 (30%), Positives = 212/428 (49%), Gaps = 37/428 (8%)
Query: 315 STQANGDSPWLLDTAASHHITNDLRNLSLHAPYEGNDELQLTDGSGLSITRVGSGTIPLS 374
S N W++D+ A+ H+ + + + + +T +G SI +G + +
Sbjct: 342 SFHVNSIPSWIIDSGANDHVCFSKTHFT---SFYKIKPVLVTLPNGTSIYVHYAGNVHFT 398
Query: 375 SKLCYLSNVLYVPKAKTNLISIPQFCDSNQVSVEFFSRFYLIKDQFTGEVLAKGLLDHAF 434
L +L++VLY P+ K NLIS+ + CDS SV F S +I+D + ++ G
Sbjct: 399 PYL-HLTHVLYSPEFKVNLISVSKICDSLSCSVNFVSNKCVIQDVTSQRMIGLGDKSDGL 457
Query: 435 YKL---------------HPFWN-LKSSGC--------------HHVRL-SSVSWHQRLG 463
YKL P N + S C + R+ S WH RLG
Sbjct: 458 YKLSMHFVNQQLQLHNSFKPLPNKVAHSACNISTSSLSKSSTVFYSSRIPESALWHFRLG 517
Query: 464 HPHSRIFNFVLSKFSILVSIVKERVCDPCRCNKSQRLPFGDFSLKSSRPLELIYSDLWGP 523
H ++ + +S+ + + + CD C + ++LPF S ++ +L++ D+WGP
Sbjct: 518 HLSNQRLS-TMSRLYPSIIVDNKAACDICHFARHKKLPFPHSSSHANSKFQLLHFDIWGP 576
Query: 524 APITSIDGFRYYIIFVDRYTKYIWLYPLKAKSEVYALFPIFQKLVENTFNSTIKIIYTDG 583
I + G +Y++ VD +T+++W+ LK+K+EV F L+EN F+ T KII TD
Sbjct: 577 LAINYVHGHKYFLTIVDDHTRFLWIILLKSKAEVPIHIKNFIALIENQFHITPKIIRTDN 636
Query: 584 GGEYVALKKYLQNFGINHLQTPPHTPQHNGAAERHHRHLVETGXXXXXXXXXXXXFWTFA 643
G E++ L + + GI H ++ TPQ NG ER H+H++ G FW++A
Sbjct: 637 GSEFL-LHDFYASKGILHQRSCVETPQQNGRVERKHQHILNIGRALLYQSKLPLSFWSYA 695
Query: 644 FKTAAYLINRMPTPILNYVSPYQKLFGQVPNYQSLRVFGCFCYPCLRPYMKSKFDTKSIP 703
F A +LINR+PT +L SPYQ L+ P+ + +VFGC CY ++K +T++
Sbjct: 696 FLHAVFLINRVPTLVLQNQSPYQLLYDSSPDVTTFKVFGCLCYASSLQSHRTKLETRARK 755
Query: 704 CVFLGYSS 711
VFLGY +
Sbjct: 756 SVFLGYKN 763
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 45 LKGHNLMSYVLGTVQIPSAFITQEGKXVPNPDFEFWECXDQLILATLRSSLSFSVMNVVA 104
L N ++++ GT+Q P A WE + LI + + +S+S S+ +
Sbjct: 5 LGAKNKLAFINGTIQQPEALDLNRAA---------WERCNHLIHSWIINSVSDSIAQTIV 55
Query: 105 DAETSAEVWKKLQVAYANKSATRILSLRDKLSRTKXGSRSISDYLTTVKQIAEEL 159
+ +++VW+ L+ ++ RI +LR ++ K G +++S+Y T ++ + EEL
Sbjct: 56 FHDYASDVWEDLKERFSKADRIRISTLRSSINNLKQGGKTVSEYFTEMRSLWEEL 110
>IMGA|Medtr4g062320.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 12039092-12042104 H
EGN_Mt090430 20090702
Length = 945
Score = 196 bits (498), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 129/425 (30%), Positives = 205/425 (48%), Gaps = 23/425 (5%)
Query: 313 FSSTQANGDSPWLLDTAASHHITNDLRNLSLHAPYEGNDELQLTDGSGLSITRVGSGTIP 372
FS + + W LD+ A+ HI N N + + + +G S+ +GTI
Sbjct: 368 FSCSINSKSDVWFLDSGANEHIVN---NTHWFTSFHKINPRPVNLPNGSSVLVEYAGTIR 424
Query: 373 LSSKLCYLSNVLYVPKAKTNLISIPQFCDSNQVSVEFFSRFYLIKDQFTGEVLAKGLLDH 432
+ + YL NVLY P NLISI + C S F ++ L++D + +++ G
Sbjct: 425 FTPQF-YLENVLYSPSFTLNLISIFKVCSSLNCYAIFHNKQCLLQDLHSQKMIGLGEQFG 483
Query: 433 AFYKLHPFWNLKSSGCHHVRLSSVSWHQRLGHPHSRIFNFVLSKFSILVSIVKERVCDPC 492
+Y W H RL VS +RL H +S+ +++ CD C
Sbjct: 484 VYYSYSALW--------HFRLGHVS-PKRLIH---------MSQLYPTLTVDVHATCDIC 525
Query: 493 RCNKSQRLPFGDFSLKSSRPLELIYSDLWGPAPITSIDGFRYYIIFVDRYTKYIWLYPLK 552
K ++LPF + +S EL++ D+WGP ITSI RY++ +D Y++Y+W+ LK
Sbjct: 526 HFAKQKKLPFSNSISVASIKFELLHFDIWGPLSITSIHNHRYFLTILDDYSRYVWIVLLK 585
Query: 553 AKSEVYALFPIFQKLVENTFNSTIKIIYTDGGGEYVALKKYLQNFGINHLQTPPHTPQHN 612
+KSEV F L++ +N T K + +D G E++ L + + GI H ++ TPQ N
Sbjct: 586 SKSEVSQHVKNFINLIQTQYNITPKTVRSDNGPEFL-LHSFYASKGIVHHRSCVETPQQN 644
Query: 613 GAAERHHRHLVETGXXXXXXXXXXXXFWTFAFKTAAYLINRMPTPILNYVSPYQKLFGQV 672
G ER H+H++ G +W++A A ++INR+ +P L+ SPYQ L +
Sbjct: 645 GRVERKHQHILNVGRALLYQSKLPVSYWSYALLHATFIINRVTSPTLHNKSPYQLLHDTI 704
Query: 673 PNYQSLRVFGCFCYPCLRPYMKSKFDTKSIPCVFLGYSSNKSAYVCYNLSQNKYIESRHV 732
P +VFG CY ++K ++ VFLGY+ YV ++ + SRHV
Sbjct: 705 PAEHIFKVFGSLCYSTTLHSHRTKLSARARKSVFLGYTVGFKGYVLLDIHTREIHISRHV 764
Query: 733 IFLEN 737
F E+
Sbjct: 765 QFYEH 769
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 9/131 (6%)
Query: 29 LTAMNYSTWRAQISPLLKGHNLMSYVLGTVQIPSAFITQEGKXVPNPDFEFWECXDQLIL 88
L NY W + N + ++ G+++IP + + WE + L+
Sbjct: 30 LDGSNYLAWSRSMIRAFGAKNKLKFIDGSMEIPDE---------DDLNRNAWERCNHLVQ 80
Query: 89 ATLRSSLSFSVMNVVADAETSAEVWKKLQVAYANKSATRILSLRDKLSRTKXGSRSISDY 148
+ + +S+S + + E + + W L+ ++ RI SLR K++ K G +S+ +Y
Sbjct: 81 SWIINSVSPQIAQTLVFHENAIDAWSDLKERFSKADIIRIASLRSKINNMKQGFKSVLEY 140
Query: 149 LTTVKQIAEEL 159
T +K + EEL
Sbjct: 141 FTEMKTLWEEL 151
>IMGA|Medtr4g157510.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 39272474-39269703 H
EGN_Mt090430 20090702
Length = 847
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 203/419 (48%), Gaps = 49/419 (11%)
Query: 320 GDSPWLLDTAASHHITNDLRNLSLHAPYEGNDE--LQLTDGSGLSITRVGSGTIPLSSKL 377
+S WL+D+ A+ HI R+L+L Y + L DGS +++T +G I S +
Sbjct: 358 SNSYWLVDSGANEHIC---RDLNLFTSYHAISPSIVTLPDGSIVTVTH--AGYINFSPQF 412
Query: 378 CYLSNVLYVPKAKTNLISIPQFCDSNQVSVEFFSRFYLIKDQFTGEVLAKGLLDHAFYKL 437
YL+NVLY + NL+S+ + C+S + +F +I+D + +++ YKL
Sbjct: 413 -YLTNVLYSSSFRLNLMSVHKVCESLSCTFQFLPNQCIIQDSTSLKMIGLANQQDGLYKL 471
Query: 438 HPFWNLKSSGCHHVRLSSVSWHQRLGHPHSRIFNFVLSKFSILVSIVKERVCDPCRCNKS 497
GH + N + S +S +VS K VCD C K
Sbjct: 472 -------------------------GHLSHQRMNMMSSLYSNIVSDNKNSVCDICHFAKQ 506
Query: 498 QRLPFGDFSLKSSRPLELIYSDLWGPAPITSIDGFRYYIIFVDRYTKYIWLYPLKAKSEV 557
+ LPF + ++ EL++ D+WGP I+SI G +Y++ VD +++++W+ LK KS V
Sbjct: 507 KHLPFSISTSHATSNFELLHLDIWGPLSISSIHGHKYFLTIVDDHSRFLWIISLKTKSGV 566
Query: 558 YALFPIFQKLVENTFNSTIKIIYTDGGGEYVALKKYLQNFGINHLQTPPHTPQHNGAAER 617
F K+V+ F+ T K I +D G E++ L Y ++ GI H ++ TPQ NG ER
Sbjct: 567 SHHVKSFIKMVQTQFHVTPKCIRSDNGPEFLILSFY-ESLGILHQKSCVETPQQNGRVER 625
Query: 618 HHRHLVETGXXXXXXXXXXXXFWTFAFKTAAYLINRMPTPILNYVSPYQKLFGQVPNYQS 677
H H++ G +W++A A +LINR PTP+L SPY L + P+ +
Sbjct: 626 KHHHILNVGRALLYQSKLPASYWSYALLHAVFLINRKPTPLLEGQSPYYALHHKFPDIDT 685
Query: 678 LRVFGCFCYPCLRPYMKSKFDTKSIPCVFLGYSSNKSAYVCYNLSQNKYIESRHVIFLE 736
K++ T++ VFLGY S ++ ++ + SRHV+F E
Sbjct: 686 F---------------KNQASTRARKTVFLGYKSGYKGFILLDIHSREIFVSRHVVFHE 729
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 108/284 (38%), Gaps = 47/284 (16%)
Query: 49 NLMSYVLGTVQIPSAFITQEGKXVPNPDFEFWECXDQLILATLRSSLSFSVMNVVADAET 108
N +S++ GT+ +P + + WE + L+ + L +S+S S+ + +
Sbjct: 33 NKLSFINGTLPVPD---------TDDLNHNAWERCNHLVHSWLINSVSDSIAQTIVFHDN 83
Query: 109 SAEVWKKLQVAYANKSATRILSLRDKLSRTKXGSRSISDYLTTVKQIAEELLLCGXXXXX 168
+ +VW+ L+ ++ RI LR L+ + G++S+ DY T +K + EEL
Sbjct: 84 AFDVWEDLKERFSKVDRIRIARLRSSLNTLRQGAKSVLDYFTEMKALWEEL--------- 134
Query: 169 XXXXXXXXXXXXXEFHDIADAV------HVRDTVISF----DELQELYLQQIDPSYDAAP 218
F DAV V D +I F +E + Q+ D P
Sbjct: 135 --HSHRPLPNCHCPFQCKCDAVTVPKSYRVEDQIIQFLTGLNEQFSVVKTQV-LLMDPLP 191
Query: 219 ITANHVRXXXXXXXXXXXXHGSFTRMADGPMAGGPMATGFSDGLSRNKLHSGGYQGSKTK 278
T N V + + D ++ S G + G Y +K
Sbjct: 192 -TLNKVFSLVIQKESNNASVPAMVNLEDSSVSINAYDERKSQGRGK-----GAY--NKPT 243
Query: 279 VQCQFCERFGHTVRQCFKSKNYFRNMLNQSPQANFSSTQANGDS 322
C FC + HTV C++ + P AN ++QAN S
Sbjct: 244 RHCTFCNKTNHTVDFCYQKHGF--------PNANKPNSQANASS 279
>IMGA|Medtr5g103970.1 Polynucleotidyl transferase, Ribonuclease H
fold chr05_pseudomolecule_IMGAG_V3 41676281-41681462 E
EGN_Mt090430 20090702
Length = 479
Score = 181 bits (458), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/259 (37%), Positives = 144/259 (55%), Gaps = 3/259 (1%)
Query: 478 SILVSIVKERVCDPCRCNKSQRLPFGDFSLKSSRPLELIYSDLWGPAPITSIDGFRYYII 537
SI+V + CD C + ++LPF S +S +L++ D+WGP I SI G +Y++
Sbjct: 7 SIIVD--NKAACDVCHFARHKKLPFSHSSSHASSKFQLLHFDIWGPLAINSIHGHKYFLT 64
Query: 538 FVDRYTKYIWLYPLKAKSEVYALFPIFQKLVENTFNSTIKIIYTDGGGEYVALKKYLQNF 597
VD +T+++W+ LK K+EV F ++EN F+ T KII TD G E++ L ++ +
Sbjct: 65 IVDDHTRFLWIILLKTKAEVPMHIKNFIVMIENQFHVTPKIIRTDNGSEFL-LHEFYASK 123
Query: 598 GINHLQTPPHTPQHNGAAERHHRHLVETGXXXXXXXXXXXXFWTFAFKTAAYLINRMPTP 657
GI H + TPQ NG ER H+H++ G FW++AF A +LINR+ TP
Sbjct: 124 GILHQSSCVETPQQNGRVERKHQHILNIGRALLYQSKLPLSFWSYAFLHAVFLINRITTP 183
Query: 658 ILNYVSPYQKLFGQVPNYQSLRVFGCFCYPCLRPYMKSKFDTKSIPCVFLGYSSNKSAYV 717
+L+ SPY L+ P+ + +VFGC CY +K +T++ VFLGY YV
Sbjct: 184 VLHNFSPYHLLYDSPPDITTFKVFGCLCYASSLQSHITKLETRARKSVFLGYKLGFKGYV 243
Query: 718 CYNLSQNKYIESRHVIFLE 736
Y+L + SRHV+F E
Sbjct: 244 LYDLHTREIFISRHVVFHE 262
>IMGA|Medtr2g038510.1 Polynucleotidyl transferase, Ribonuclease H
fold chr02_pseudomolecule_IMGAG_V3 10761249-10763836 E
EGN_Mt090430 20090702
Length = 772
Score = 176 bits (445), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 198/408 (48%), Gaps = 50/408 (12%)
Query: 324 WLLDTAASHHITNDLRNLSLHAPYEGNDELQLTDGSGLSITRVGSGTIPLSSKLCYLSNV 383
WL+D+ A+ HI + L L Y + + +G S+ +GT+ S ++++V
Sbjct: 389 WLIDSGANEHICSSLH---LFHSYYRIKPICVNLPNGSSVIVQYAGTVVFSPHF-HITHV 444
Query: 384 LYVPKAKTNLISIPQFCDSNQVSVEFFSRFYLIKDQFTGEVLAKGLLDHAFYKLHPFWNL 443
LY P K LIS+ + C S V F Y+I+D T +++ G L Y+LHPF
Sbjct: 445 LYSPSFKVYLISVSKICQSLPYHVHFLLNTYVIQDVKTQKMIGLGNLCDGLYRLHPF--A 502
Query: 444 KSSGCHHVRLSSVS------------------------WHQRLGHPHSRIFNFVLSKFSI 479
+S H S+VS WH RLGH ++ + S+
Sbjct: 503 PASPQAHFISSAVSPTNKMSCNSVSSNNNVSSIPSNAIWHFRLGHLSNQ-------RLSM 555
Query: 480 LVSIVKERVCDPCRCNKSQRLPFGDFSLKSSRPLELIYSDLWGPAPITSIDGFRYYIIFV 539
+ S+ D NK+ +S+ SS+ EL++ D+WGP +TS+ G +Y++ V
Sbjct: 556 MHSLYSSITID----NKA-------YSIASSK-FELLHFDIWGPLSVTSVHGHKYFLTIV 603
Query: 540 DRYTKYIWLYPLKAKSEVYALFPIFQKLVENTFNSTIKIIYTDGGGEYVALKKYLQNFGI 599
D +++++W+ LK KSEV F L+ + T K I +D G E++ + ++ + GI
Sbjct: 604 DDFSRFLWVILLKNKSEVSNHVKNFVVLIHTHYQITPKYIRSDNGPEFL-IPEFYASKGI 662
Query: 600 NHLQTPPHTPQHNGAAERHHRHLVETGXXXXXXXXXXXXFWTFAFKTAAYLINRMPTPIL 659
H ++ TPQ NG ER H+H++ FW++A A +LIN++PTP+
Sbjct: 663 IHQKSCVETPQQNGRVERKHQHILNVARALLFQSKLPNFFWSYAVIHAVFLINKVPTPLF 722
Query: 660 NYVSPYQKLFGQVPNYQSLRVFGCFCYPCLRPYMKSKFDTKSIPCVFL 707
SPYQ L+ +P+ S +VFGC C+ +SK +++ +F
Sbjct: 723 KQKSPYQLLYDSLPDINSFKVFGCLCFASTLLAQRSKLQSRARKSIFF 770
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 111/302 (36%), Gaps = 43/302 (14%)
Query: 29 LTAMNYSTWRAQISPLLKGHNLMSYVLGTVQIPSAFITQEGKXVPNPDFE--FWECXDQL 86
LT NY W + L N ++ G+V IP P D WE + L
Sbjct: 36 LTGPNYLAWNRSMKRALGTKNKFVFIDGSVPIP-----------PMDDLNRTAWERCNNL 84
Query: 87 ILATLRSSLSFSVMNVVADAETSAEVWKKLQVAYANKSATRILSLRDKLSRTKXGSRSIS 146
IL+ + +S+S + + E + +VW +LQ ++ R+ SLR ++ K G +S+
Sbjct: 85 ILSWIINSVSPQIAQTIVFHEYAIDVWIELQERFSKVDRIRVASLRSSINNLKQGDKSVL 144
Query: 147 DYLTTVKQIAEELLLCGXXXXXXXXXXXXXXXXXXEFHDIADAVHVRDTVISF-----DE 201
DY T++K + EEL E A + D VI F D
Sbjct: 145 DYFTSIKSLWEEL-----NSHRPMPMCTCPYPCRCESMRAARDFRMEDQVIQFLTGLNDS 199
Query: 202 LQELYLQ--QIDPSYDAAPITANHVRXXXXXXXXXXXXHGSFTR-MADGPMAGGPMATGF 258
+ Q IDP + + ++ + + + A P G
Sbjct: 200 FSVVKTQVLLIDPLPSINKVYSMVIQEESNIIPPTSLASNEDSSILVNASDARKPFLRGK 259
Query: 259 SDGLSRNKLHSGGYQGSKTKVQCQFCERFGHTVRQCFKSKNYFRNMLNQSPQANFSSTQA 318
S G S++K +S C FC R HTV C+ ++ P AN + +
Sbjct: 260 SSGTSQSKNNSR---------YCTFCRRNNHTVEYCYLKHDF--------PNANKPTASS 302
Query: 319 NG 320
N
Sbjct: 303 NA 304
>IMGA|Medtr5g072700.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr05_pseudomolecule_IMGAG_V3 25937763-25933415 H
EGN_Mt090430 20090702
Length = 1413
Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 193/419 (46%), Gaps = 43/419 (10%)
Query: 324 WLLDTAASHHITNDLRNLSLHAPYEGNDELQLTDGSGLSITRVGSGTIPLSSKLCYLSNV 383
W LD+ A+ HI + + + + + +G S+ +GTI + Y+ +V
Sbjct: 381 WFLDSGANEHIVSSTHWFT---SFHKINPKPVNLPNGTSVLVEYAGTIHFTPHF-YIEDV 436
Query: 384 LYVPKAKTNLISIPQFCDSNQVSVEFFSRFYLIKDQFTGEVLA-----KGLLDHAFYKLH 438
LY P NLISI + C S F + ++D + +++ +GLL H K
Sbjct: 437 LYSPSFTLNLISIFKVCSSLHCYASFHDKKCFLQDLHSQKMIGLGEQVRGLLGHVSNK-- 494
Query: 439 PFWNLKSSGCHHVRLSSVSWHQRLGHPHSRIFNFVLSKFSILVSIVKERVCDPCRCNKSQ 498
RL H +S +++ CD C+ K +
Sbjct: 495 ----------------------RLNH---------MSHLYPTLTVDNHATCDICQFAKQK 523
Query: 499 RLPFGDFSLKSSRPLELIYSDLWGPAPITSIDGFRYYIIFVDRYTKYIWLYPLKAKSEVY 558
+L F +S EL++ D+WGP +TSI RY++ +D Y+ + W+ LK+K EV
Sbjct: 524 KLSFPTSVSVASSKFELLHFDIWGPLAVTSIHNHRYFLTILDDYSIFFWIVLLKSKYEVS 583
Query: 559 ALFPIFQKLVENTFNSTIKIIYTDGGGEYVALKKYLQNFGINHLQTPPHTPQHNGAAERH 618
F L+ ++ T K++ +D G E++ L + + GI H ++ TPQ NG ER
Sbjct: 584 QHVKNFINLIHTQYHITPKVVRSDNGPEFL-LNSFYASKGIVHHKSCVETPQQNGRVERK 642
Query: 619 HRHLVETGXXXXXXXXXXXXFWTFAFKTAAYLINRMPTPILNYVSPYQKLFGQVPNYQSL 678
H+H++ G +W++A A ++INR+ +P L+ SPYQ L G +P+ Q+
Sbjct: 643 HQHILNVGRALLFQSKLPSSYWSYALLHAIFIINRVTSPTLHNKSPYQLLHGTIPDVQTF 702
Query: 679 RVFGCFCYPCLRPYMKSKFDTKSIPCVFLGYSSNKSAYVCYNLSQNKYIESRHVIFLEN 737
+VFG CY ++K ++ VFLGY+ YV ++ + SRHV F E+
Sbjct: 703 KVFGSLCYSTTLQSHRTKLSARARKTVFLGYAVGYKGYVLLDIHTREIHISRHVQFHEH 761
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 9/131 (6%)
Query: 29 LTAMNYSTWRAQISPLLKGHNLMSYVLGTVQIPSAFITQEGKXVPNPDFEFWECXDQLIL 88
L NY W + N + +V G ++IP + + WE + LI
Sbjct: 30 LDGTNYLAWSRSMIRAFVVKNKLKFVDGYMEIPDE---------DDLNRSAWERCNHLIQ 80
Query: 89 ATLRSSLSFSVMNVVADAETSAEVWKKLQVAYANKSATRILSLRDKLSRTKXGSRSISDY 148
+ + +S+S + + E + + W L+ ++ RI SLR K++ K GS+S+ +Y
Sbjct: 81 SWIINSVSPPIAQTLVFHENAVDGWSDLKERFSKADKIRIASLRSKINNMKQGSKSVLEY 140
Query: 149 LTTVKQIAEEL 159
T +K + EEL
Sbjct: 141 FTEMKTLWEEL 151
>IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H
fold chr05_pseudomolecule_IMGAG_V3 20699955-20695616 H
EGN_Mt090430 20090702
Length = 1396
Score = 169 bits (429), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 184/385 (47%), Gaps = 40/385 (10%)
Query: 373 LSSKLCYLSNVLYVPKAKTNLISIPQFCDSNQVSVEFFSRFYLIKDQFTGEVLAKGLLDH 432
+ S L + +++ + + NL + +V F +FYL DQ + +++
Sbjct: 393 ICSNLSFFTSLHRIKPVRVNLPNKTSIIVHFAGNVVFTPQFYLTNDQTSLKMIGLAKQVA 452
Query: 433 AFYKLHPFWNLKSSGCHH-----VRLSSVS------------WHQRLGHPHSRIFNFVLS 475
Y+ P + S+ H SS+S WH RLGH + N +
Sbjct: 453 GLYRYTPPSDFSSTSLMHSPNKSCNFSSISCNSNNCIPVAALWHFRLGH----LSNQRMI 508
Query: 476 KFSILV-SIV--KERVCDPCRCNKSQRLPFGDFSLKSSRPLELIYSDLWGPAPITSIDGF 532
K S L SIV VCD C +K + LPF +S EL++ D+WGP I+S+ G
Sbjct: 509 KMSHLYPSIVHNNRDVCDICHFSKQKHLPFSSSLSHASTNFELLHFDIWGPISISSVHGH 568
Query: 533 RYYIIFVDRYTKYIWLYPLKAKSEVYALFPIFQKLVENTFNSTIKIIYTDGGGEYVALKK 592
RY++ +D +++++W+ LK+KSEV F ++ F+ T K + +D G E++ L
Sbjct: 569 RYFLTILDDHSRFLWIILLKSKSEVSLHVKNFILMIRTQFHVTPKYVRSDNGPEFL-LND 627
Query: 593 YLQNFGINHLQTPPHTPQHNGAAERHHRHLVETGXXXXXXXXXXXXFWTFAFKTAAYLIN 652
+ + GI H ++ TPQ NG ER H+H++ G FW++A A +LIN
Sbjct: 628 FYSSHGIIHQKSCVETPQQNGRVERKHQHILNVGRALLYQSKLPPSFWSYAILHAVFLIN 687
Query: 653 RMPTPILNYVSPYQKLFGQVPNYQSLRVFGCFCYPCLRPYMKSKFDTKSIPCVFLGYSSN 712
R+PT +L+ SPY LF ++P+ Q KSK ++ +FLGY S
Sbjct: 688 RVPTHVLHNQSPYHVLFHKLPDIQ---------------LFKSKLQPRARKSLFLGYKSG 732
Query: 713 KSAYVCYNLSQNKYIESRHVIFLEN 737
Y ++LS + SRHVIF EN
Sbjct: 733 YKGYHLFDLSTREIFVSRHVIFHEN 757
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
Query: 28 KLTAMNYSTWRAQISPLLKGHNLMSYVLGTVQIPSAFITQEGKXVPNPDFEFWECXDQLI 87
KL NY W + L N + ++ G+++ P + + + WE + L+
Sbjct: 30 KLDGSNYLAWNRSMKRSLGTKNKLGFINGSIEQPD---------LDDLNRSAWERCNFLV 80
Query: 88 LATLRSSLSFSVMNVVADAETSAEVWKKLQVAYANKSATRILSLRDKLSRTKXGSRSISD 147
+ + +S+S S+ V +T+ EVW+ L ++ RI +LR ++ K G++S+ +
Sbjct: 81 QSWIINSVSDSIAQTVVFYDTAYEVWQDLHERFSKADRIRIANLRSSINNLKQGAKSVLE 140
Query: 148 YLTTVKQIAEEL 159
Y T +K + EEL
Sbjct: 141 YFTELKSLWEEL 152
>IMGA|Medtr4g079130.1 Polynucleotidyl transferase, Ribonuclease H
fold chr04_pseudomolecule_IMGAG_V3 15761100-15765439 H
EGN_Mt090430 20090702
Length = 1414
Score = 166 bits (420), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 200/446 (44%), Gaps = 60/446 (13%)
Query: 311 ANFSSTQANGDSPWLLDTAASHHITNDLRNLSLHAPYEGNDELQLTDGSGLSITRVGSGT 370
+F S+ N WL+D+ A+ HI D+ + + + + ++ +G + +GT
Sbjct: 374 VSFPSSSTNKPPFWLIDSGANEHICCDI---TFFSSFYRIKPVNVSLPNGTIVLVHYAGT 430
Query: 371 IPLSSKLCYLSNVLYVPKAKTNLISIPQFCDSNQVSVEFFSRFYLIKDQFTGEVLAKGLL 430
+ +SK YL++VLY P NLIS+ + C+S F LI+DQ + +++
Sbjct: 431 VSFNSKF-YLNHVLYSPNFLLNLISVAKLCESLTCFFHFSLDKCLIQDQQSLKMIGLAKQ 489
Query: 431 DHAFYKLHP--------FWNLKSSGCHHVRLSSVS-----------WHQRLGHPHSRIFN 471
YK +P ++ + C+ V SS + WH RLGH +
Sbjct: 490 MDGLYKFYPSSSSCNLELFSSPTKYCNVVLPSSCNKIPTFVPSDTLWHFRLGHLSKQRLQ 549
Query: 472 FVLSKFSILVSIVKERVCDPCRCNKSQRLPFGDFSLKSSRPLELIYSDLWGPAPITSIDG 531
LS + I + +CD C K + LPF TS D
Sbjct: 550 -TLSLLYPSIKIDNKAICDLCHFAKHKHLPF------------------------TSND- 583
Query: 532 FRYYIIFVDRYTKYIWLYPLKAKSEVYALFPIFQKLVENTFNSTIKIIYTDGGGEYVALK 591
+++++W+ LK K+EV F +++N F++T K I TD G E++ L
Sbjct: 584 ----------HSRFLWIILLKTKAEVSTHVKNFITMIKNHFHTTPKFIRTDNGPEFM-LS 632
Query: 592 KYLQNFGINHLQTPPHTPQHNGAAERHHRHLVETGXXXXXXXXXXXXFWTFAFKTAAYLI 651
+ GI H ++ TPQ NG ER H+H++ G +W +A + A +LI
Sbjct: 633 TLYSSHGIIHQKSCVETPQQNGRVERKHQHILNVGRALLYQSKLPPAYWCYAIQHAVFLI 692
Query: 652 NRMPTPILNYVSPYQKLFGQVPNYQSLRVFGCFCYPCLRPYMKSKFDTKSIPCVFLGYSS 711
NR+PTP LN SPY L ++P+ +VFGC CY +K ++ +F+GY S
Sbjct: 693 NRVPTPTLNNQSPYFVLHHKLPDSSLFKVFGCLCYASTLQSHTTKLKHRARKSIFIGYQS 752
Query: 712 NKSAYVCYNLSQNKYIESRHVIFLEN 737
+ Y+L + SRHV F EN
Sbjct: 753 GYKGFTLYDLHSREIFISRHVTFHEN 778
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 28 KLTAMNYSTWRAQISPLLKGHNLMSYVLGTVQIPSAFITQEGKXVPNPDFEFWECXDQLI 87
KLT NY W + L N + ++ G++ +P WE + L+
Sbjct: 30 KLTGSNYIAWSRTVERSLGTKNKLGFINGSIPMPDEDDLNRAA---------WERCNHLV 80
Query: 88 LATLRSSLSFSVMNVVADAETSAEVWKKLQVAYANKSATRILSLRDKLSRTKXGSRSISD 147
+ L +S+S S+ V +T+ EVW L+ ++ RI +LR ++ K G++++ D
Sbjct: 81 QSWLINSVSDSIAPTVVFCDTALEVWLDLKERFSKIDRIRIANLRSSINNLKQGAKTVLD 140
Query: 148 YLTTVKQIAEEL 159
Y T +K + EEL
Sbjct: 141 YFTEMKSLWEEL 152
>IMGA|Medtr8g044860.1 Zinc finger, C2H2-type; Polynucleotidyl
transferase, Ribonuclease H fold
chr08_pseudomolecule_IMGAG_V3 10143838-10146452 H
EGN_Mt090430 20090702
Length = 753
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 207/499 (41%), Gaps = 99/499 (19%)
Query: 324 WLLDTAASHHITNDLRNLSLHAPYEGNDELQLTDGSGLSITRVGSGTIPLSSKLCYLSNV 383
WL+D+ A+ HI + +LSL + L +T +G S+ +GT+ S +++N
Sbjct: 333 WLIDSGANEHICS---SLSLLHSFYIIKPLHVTLPNGTSVLVHYAGTVSFSPHF-HITN- 387
Query: 384 LYVPKAKTNLISIPQFCDSNQVSVEFFSRFYLIKDQFTGEVLAKGLLDHAFYKLHPFWNL 443
+I + CD R + A H F +
Sbjct: 388 --------KMIGLGDLCDG-------LCRL---------RIPASSNFSHCFVNNFQCNKV 423
Query: 444 KSSGCHHVRL-------SSVSWHQRLGHPHSRIFNFVLSKFSIL---VSIVKERVCDPCR 493
C+ V S+ WH RLGH + N LS+ L + + + +CD C
Sbjct: 424 SYESCNSVSCNNNVHIPSTALWHFRLGH----LSNQRLSQMHHLYPDIHVDNKFICDICH 479
Query: 494 CNKSQRLPFGDFSLKSSRPLELIYSDLWGPAPITSIDGFRYYIIFVDRYTKYIWLYPLKA 553
K ++LP+ + +S EL+Y D+WGP SI G RY++ VD +++++W K
Sbjct: 480 FAKQRKLPYNSSTSIASSNFELLYLDIWGPLAKVSIHGQRYFLTIVDDHSRFLWTILFKN 539
Query: 554 KSEVYALFPIFQKLVENTFNSTIKIIYTDGGGEYVALKKYLQNFGINHLQTPPHTPQHNG 613
KSEV + F L++N T KII +D G ++ L + + GI H ++ TPQHN
Sbjct: 540 KSEVPSHIQHFIYLIQNKHKVTPKIIRSDNGHVFL-LSAFYASQGIIHQRSCVETPQHN- 597
Query: 614 AAERHHRHLVETGXXXXXXXXXXXXFWTFAFKTAAYLINRMPTPILNYVSPYQKLFGQVP 673
+LINR+PT +L SPYQ L+ +P
Sbjct: 598 ----------------------------------VFLINRVPTLVLENKSPYQVLYKTLP 623
Query: 674 NYQSLRVFGCFCYPCLRPYMKSKFDTKSIPCVFLGYSSNKSAYVCYNLSQNKYIESRHVI 733
+ S +VFGC CY ++K +++ VFLGY S Y+L+ + SR+V
Sbjct: 624 DINSFKVFGCLCYASTLQSHRTKLQSRARKSVFLGYKSGYKGSFLYDLNTKEIFMSRNVT 683
Query: 734 FLENTFXXXXXXXXXXXXXXXXXXXXXFEPLSMTTPFVPTSITSVSSAVPNPMPTVPIHH 793
F E+ F P TPFV VP+ P+ PI
Sbjct: 684 FHESIL------PYNSTNTHFSSNWQYFTPSHTQTPFVDV-------PVPSTFPSSPI-- 728
Query: 794 QPISPTVPIHHQPISLSSQ 812
I+P+ P+ P+ SS+
Sbjct: 729 --ITPSSPL---PLRTSSR 742
>IMGA|Medtr1g013560.1 Polynucleotidyl transferase, Ribonuclease H
fold chr01_pseudomolecule_IMGAG_V3 2535883-2538036 H
EGN_Mt090430 20090702
Length = 680
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 164/351 (46%), Gaps = 60/351 (17%)
Query: 324 WLLDTAASHHITNDLRNLSLHAPYEGNDELQLTDGSGLSITRVGSGTIPLSSKLCYLSNV 383
WL+D+ A+ HI D+ + S + + ++ +G S+ +G + +SK +LS+V
Sbjct: 384 WLIDSGANEHICCDIASFS---SFYRIKPVYVSLPNGNSVLAHFAGNVFFNSKF-HLSHV 439
Query: 384 LYVPKAKTNLISIPQFCDSNQVSVEFFSRFYLIKDQFTGEVLAKGLLDHAFYKLHPFWNL 443
LY P NLIS+ + CDS F LI+DQ + +++ YK +P +
Sbjct: 440 LYSPHFTLNLISVAKCCDSLTCFFHFSLEKCLIQDQQSLKMIGLAKQQDGLYKFYP--SC 497
Query: 444 KSSGCHHVRLSSVSWHQRLGHPHSRIFNFVLSKFSILVSIVKERVCDPCRCNKSQRLPFG 503
KSS NF S S P CN
Sbjct: 498 KSS------------------------NFEFSALS------------PSSCN-------- 513
Query: 504 DFSLKSSRPLELIYSDLWGPAPITSIDGFRYYIIFVDRYTKYIWLYPLKAKSEVYALFPI 563
+ I + +WGP + S+ G RY++ +D +T+++W+ LK K+EV +
Sbjct: 514 ---------VVSISNYIWGPLSVASVHGHRYFLTILDDHTRFLWVILLKTKAEVSSHVKN 564
Query: 564 FQKLVENTFNSTIKIIYTDGGGEYVALKKYLQNFGINHLQTPPHTPQHNGAAERHHRHLV 623
F +++N F++T K I TD G E++ L + + GI H ++ TPQ NG ER H+H++
Sbjct: 565 FITMIQNHFHTTPKFIRTDNGPEFM-LPSFYASHGIIHQKSCVETPQQNGRVERKHQHIL 623
Query: 624 ETGXXXXXXXXXXXXFWTFAFKTAAYLINRMPTPILNYVSPYQKLFGQVPN 674
G FW++A A +LINR+PTP+L+ SPY L ++P+
Sbjct: 624 NVGRALLYQSKLPPSFWSYAIHHAVFLINRVPTPLLHNQSPYFLLHHKLPD 674
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 15/158 (9%)
Query: 8 NVVHTSGRSLVSINGNQFP------LKLTAMNYSTWRAQISPLLKGHNLMSYVLGTVQIP 61
NVV + S+ ++ ++ P K NY W + L N + ++ G++ +P
Sbjct: 5 NVVQSDTESVFFVHPSEGPNSLSITPKFNGSNYIAWSRTVERSLGTKNKLGFINGSIPMP 64
Query: 62 SAFITQEGKXVPNPDFEFWECXDQLILATLRSSLSFSVMNVVADAETSAEVWKKLQVAYA 121
+ + WE + L+ + L +S+S S+ + +++ EVW L+ ++
Sbjct: 65 DE---------DDLNRTAWERCNHLVQSWLINSVSESIAQTIVFCDSALEVWLDLKERFS 115
Query: 122 NKSATRILSLRDKLSRTKXGSRSISDYLTTVKQIAEEL 159
RI +LR ++ K GS+ + DY T +K + EEL
Sbjct: 116 KIDRIRIANLRSNINNLKQGSKFVLDYFTEIKSLWEEL 153
>IMGA|Medtr7g045790.1 Polynucleotidyl transferase, Ribonuclease H
fold chr07_pseudomolecule_IMGAG_V3 11036769-11039177 H
EGN_Mt090430 20090702
Length = 710
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 97/170 (57%), Gaps = 1/170 (0%)
Query: 567 LVENTFNSTIKIIYTDGGGEYVALKKYLQNFGINHLQTPPHTPQHNGAAERHHRHLVETG 626
++EN F+ T KII TD G E++ L ++ + GI H ++ TPQ NG ER H+H++ G
Sbjct: 1 MIENQFHVTPKIIRTDNGSEFL-LHEFYASKGILHQRSCVETPQQNGRVERKHQHILNIG 59
Query: 627 XXXXXXXXXXXXFWTFAFKTAAYLINRMPTPILNYVSPYQKLFGQVPNYQSLRVFGCFCY 686
FW++AF A +LINR+PTP+L+ SPY L+ P+ + +VFGC CY
Sbjct: 60 RALLYQSKLPLSFWSYAFLHAVFLINRIPTPVLHNFSPYHLLYDSPPDITTFKVFGCLCY 119
Query: 687 PCLRPYMKSKFDTKSIPCVFLGYSSNKSAYVCYNLSQNKYIESRHVIFLE 736
++K +T++ VFLGY YV Y+L + SRHV+F E
Sbjct: 120 ASSLQSHRTKLETRARKSVFLGYKLGFKGYVLYDLHTREIFISRHVVFHE 169
>IMGA|CU179634_24.1 Polynucleotidyl transferase, Ribonuclease H fold
CU179634.6 87152-89450 H EGN_Mt090430 20090702
Length = 688
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 108/246 (43%), Gaps = 51/246 (20%)
Query: 496 KSQRLPFGDFSLKSSRPLELIYSDLWGPAPITSIDGFRYYIIFVDRYTKYIWLYPLKAKS 555
+ RLPF + ++ EL++ D+WGP T+ D F+Y+I VD ++K W L KS
Sbjct: 3 RQSRLPFPPKTHTTTGIFELLHVDIWGPYQTTTHDNFKYFITLVDDFSKSTWTQLLSCKS 62
Query: 556 EVYALFPIFQKLVENTFNSTIKIIYTDGGGEYVALKK--YLQNFGINHLQTPPHTPQHNG 613
+ + F +VEN F++T+K I +D G E+ + + + Q+ GI H ++ P+TPQ NG
Sbjct: 63 NAFHVLKAFILMVENQFSTTVKTIRSDNGLEFTSNETTLFFQSKGIIHQKSCPYTPQQNG 122
Query: 614 AAERHHRHLVETGXXXXXXXXXXXXFWTFAFKTAAYLINRMPTPILNYVSPYQKLFGQVP 673
ER H+ ++ET +W+
Sbjct: 123 VVERKHKFILETARALLFQSKLPVKYWS-------------------------------- 150
Query: 674 NYQSLRVFGCFCYPCLRPYMKSKFDTKSIPCVFLGYSSNKSAYVCYNLSQNKYIESRHVI 733
+ ++KFD K+IP VF+GY Y NLS K SR VI
Sbjct: 151 -----------------EFHRTKFDPKTIPHVFVGYPYATKGYKVLNLSTQKIHVSRDVI 193
Query: 734 FLENTF 739
F E F
Sbjct: 194 FHETIF 199
>IMGA|Medtr4g080020.1 Polynucleotidyl transferase, Ribonuclease H
fold chr04_pseudomolecule_IMGAG_V3 16287611-16283185 H
EGN_Mt090430 20090702
Length = 1275
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 87/165 (52%), Gaps = 1/165 (0%)
Query: 572 FNSTIKIIYTDGGGEYVALKKYLQNFGINHLQTPPHTPQHNGAAERHHRHLVETGXXXXX 631
F T K I D G E++ LK + + GI H ++ TPQ NG ER H+H++
Sbjct: 454 FQITSKTIRIDNGPEFM-LKDFYASHGIIHHKSCVETPQQNGRVERKHQHILNVVRALLF 512
Query: 632 XXXXXXXFWTFAFKTAAYLINRMPTPILNYVSPYQKLFGQVPNYQSLRVFGCFCYPCLRP 691
FW++A A +LINR+ TP+L+ SPY L ++P+ +VFGC CY
Sbjct: 513 QSKLPPTFWSYAVLHAVFLINRVSTPLLHNQSPYLVLHNKLPSLDLFKVFGCLCYASTLQ 572
Query: 692 YMKSKFDTKSIPCVFLGYSSNKSAYVCYNLSQNKYIESRHVIFLE 736
++K +++ +FLGY S YV ++L+ + SRHV F E
Sbjct: 573 NHRTKLQSRARKSIFLGYQSGYKGYVLFDLTSREIFISRHVSFHE 617
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 9/131 (6%)
Query: 28 KLTAMNYSTWRAQISPLLKGHNLMSYVLGTVQIPSAFITQEGKXVPNPDFEFWECXDQLI 87
K NY W + L + ++ G + +P A + + WE + L+
Sbjct: 34 KFNGTNYLAWSRSMQRALGAKCKLGFINGEIPVPDA---------DDLNRTAWERCNHLV 84
Query: 88 LATLRSSLSFSVMNVVADAETSAEVWKKLQVAYANKSATRILSLRDKLSRTKXGSRSISD 147
+ + +SLS S+ V ++++EVW+ L ++ RI +LR ++ K G++S+ D
Sbjct: 85 QSWILNSLSESIAQTVVFCDSASEVWQDLHERFSKTDRIRIATLRSSINILKQGTKSVLD 144
Query: 148 YLTTVKQIAEE 158
Y T +K + EE
Sbjct: 145 YFTELKGLWEE 155
>IMGA|Medtr3g058920.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 13083640-13084056 H
EGN_Mt090430 20090702
Length = 138
Score = 92.8 bits (229), Expect = 9e-19, Method: Composition-based stats.
Identities = 47/129 (36%), Positives = 73/129 (56%), Gaps = 3/129 (2%)
Query: 484 VKERVCDPCRCNKSQRLPF-GDFSLKSSRPLELIYSDLWGPAPITSIDGFRYYIIFVDRY 542
+ E+ C+ C K R F + +++ L +++SD++GP + + G RY+I FVD Y
Sbjct: 10 IVEKSCNICLVGKHSRSAFKSELKMRAKHVLNVVHSDIYGPIKVPTYSGNRYFITFVDEY 69
Query: 543 TKYIWLYPLKAKSEVYALFPIFQKLVENTFNSTIKIIYTDGGGEYVA--LKKYLQNFGIN 600
+K +WLY +K KS+ +F F+ L E +KI+ T GGGEY + + Y N GI
Sbjct: 70 SKMLWLYLIKLKSDALEVFKKFKVLPEKQSGMKLKILITYGGGEYTSKDFESYCTNQGII 129
Query: 601 HLQTPPHTP 609
H T P+TP
Sbjct: 130 HEVTTPYTP 138
>IMGA|CU571152_16.1 Polynucleotidyl transferase, Ribonuclease H fold
CU571152.5 61656-61988 H EGN_Mt090430 20090702
Length = 110
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 529 IDGFRYYIIFVDRYTKYIWLYPLKAKSEVYALFPIFQKLVENTFNSTIKIIYTDGGGEY- 587
+ G RY+++F+D Y+ + W+Y +K + E+ ++ F K+++ F+ IK+ D EY
Sbjct: 1 MGGARYFVLFIDDYSHFTWIYMIKNRHELTQIYINFAKMIQTQFSKVIKVFRRDNAMEYR 60
Query: 588 -VALKKYLQNFGINHLQTPPHTPQHNGAAERHHRHLVET 625
L +L G + P+T Q G AER HRH++++
Sbjct: 61 DSKLLSFLSEQGTFSEFSYPYTSQQKGRAERKHRHILDS 99
>IMGA|Medtr5g049200.1 retroelement pol polyprotein-like, related
chr05_pseudomolecule_IMGAG_V3 21011474-21012209 E
EGN_Mt090430 20090702
Length = 210
Score = 63.2 bits (152), Expect = 6e-10, Method: Composition-based stats.
Identities = 47/146 (32%), Positives = 68/146 (46%), Gaps = 13/146 (8%)
Query: 324 WLLDTAASHHITNDLRNLSLHAPYEGNDELQLTDGSGLSITRVGS----GTIPLSSKLCY 379
W+LD+ AS+H+T L+ Y + + + GL R + GT+ L+ L
Sbjct: 36 WILDSGASNHMTGTLQ-------YMHDVKEVIGCPVGLPNCRTTTCTKEGTVKLTDGL-R 87
Query: 380 LSNVLYVPKAKTNLISIPQFCDSNQVSVEFFSRFYLIKDQFTGEVLAKGLLDHAFYKLHP 439
L NVLYVPK NLISI Q D +V+F F I+D+ + ++ G Y
Sbjct: 88 LENVLYVPKLNCNLISISQLLDELNCNVQFNGNFCAIQDRTSKMLIGAGEQRDGLYFFRE 147
Query: 440 FWNLKSSGCHHVRLSSVSWHQRLGHP 465
+K+ V WH+RLGHP
Sbjct: 148 VPKVKACKVEGTNQLEV-WHKRLGHP 172
>IMGA|Medtr8g128710.1 Polynucleotidyl transferase, Ribonuclease H
fold chr08_pseudomolecule_IMGAG_V3 30179997-30181475 E
EGN_Mt090430 20090702
Length = 98
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 42/80 (52%)
Query: 607 HTPQHNGAAERHHRHLVETGXXXXXXXXXXXXFWTFAFKTAAYLINRMPTPILNYVSPYQ 666
+TPQHNG AER ++ L+E FW A T YL+NR P +N + Y+
Sbjct: 4 NTPQHNGVAERMNQTLLEKARYMLSNVGLTRTFWAEAVNTTCYLVNRGPHTSINLKTLYE 63
Query: 667 KLFGQVPNYQSLRVFGCFCY 686
G+ +Y +LRVFGC Y
Sbjct: 64 LWPGKSVDYSNLRVFGCTVY 83
>IMGA|Medtr7g123950.1 Retrotransposon gag protein
chr07_pseudomolecule_IMGAG_V3 29015812-29013196 E
EGN_Mt090430 20090702
Length = 302
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 16/148 (10%)
Query: 12 TSGRSLVSINGNQFPLKLTAMNYSTWRAQISPLLKGHNLMSYVLGTVQIPSAFITQEGKX 71
T G SLV NQ L NY W + L N + + GTV+ PSA
Sbjct: 42 TPGISLV----NQ---PLNGGNYGEWSRSMLLSLSAKNKLGLIDGTVKAPSA-------- 86
Query: 72 VPNPDFEFWECXDQLILATLRSSLSFSVMNVVADAETSAEVWKKLQVAYANKSATRILSL 131
+P W+ + L+L + S+ + V ++T+A VW L ++ +RI +
Sbjct: 87 -DDPKLPLWKRCNDLVLTWILHSIEPDIARSVIFSDTAAAVWSDLHDRFSQGDESRIYQI 145
Query: 132 RDKLSRTKXGSRSISDYLTTVKQIAEEL 159
R ++S + GS ISDY T +K + +EL
Sbjct: 146 RQEISECRQGSLLISDYYTKLKSLWDEL 173
>IMGA|Medtr5g093020.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr05_pseudomolecule_IMGAG_V3
36507044-36505941 H EGN_Mt090430 20090702
Length = 367
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 9/131 (6%)
Query: 29 LTAMNYSTWRAQISPLLKGHNLMSYVLGTVQIPSAFITQEGKXVPNPDFEFWECXDQLIL 88
LT NY W + L N + ++ GT+ PS + ++ W+ D ++L
Sbjct: 48 LTDHNYHNWSRAMKRALSSKNKIRFINGTLPKPSYL---------DSTYDLWDRCDNMVL 98
Query: 89 ATLRSSLSFSVMNVVADAETSAEVWKKLQVAYANKSATRILSLRDKLSRTKXGSRSISDY 148
+ + +LS + E++ E+WK L+ ++ + R+ L L T+ G RS+S Y
Sbjct: 99 SWITRTLSPHIFQSTICIESAFELWKDLEDRFSKGNFFRVSDLLRDLHSTQQGDRSLSKY 158
Query: 149 LTTVKQIAEEL 159
T +K + +EL
Sbjct: 159 FTNMKILWDEL 169
>IMGA|Medtr4g114890.1 gag-pol polyprotein, related
chr04_pseudomolecule_IMGAG_V3 26420343-26419721 E
EGN_Mt090430 20090702
Length = 183
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 324 WLLDTAASHHITNDLRNLSLHAPYEGNDELQLTDGSGLSITRVGSGTIPLSSKLCYLSNV 383
WL+D+ +HH+T+D R+L ++++ +G+ + + +G+ + S +SNV
Sbjct: 13 WLIDSGCTHHMTHD-RDLFKELNKSTISKVRMLNGAHIEVEGIGTVLVKSHSGYKQISNV 71
Query: 384 LYVPKAKTNLISIPQFCDSNQVSVEFFSRFYLIKDQFTGEVL 425
LY PK +L+S+PQ + V F +IKDQ EVL
Sbjct: 72 LYAPKLNQSLLSVPQLL-TKGYKVLFEHEKCVIKDQNNKEVL 112
>IMGA|Medtr3g169320.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 44131380-44131084 H
EGN_Mt090430 20090702
Length = 98
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 552 KAKSEVYALFPIFQKLVENTFNSTIKIIYTDGGGEYVALKKYLQNFGINHLQTPPHTPQH 611
K KSEV F +EN FN +K + TD G E++ + + + GI H + TPQ
Sbjct: 4 KTKSEVSKSVQNFILNIENQFNCKVKTVRTDNGPEFL-MPDFYSSKGIEHQTSCVETPQQ 62
Query: 612 NGAAERHHRHLVETG 626
NG ER H+H++
Sbjct: 63 NGRVERKHQHILNVA 77